prot_E-siliculosus-1a_M_contig89.16868.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig89.16868.1
Unique Nameprot_E-siliculosus-1a_M_contig89.16868.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length110
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig89.16868.1 vs. uniprot
Match: A0A835YNK7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNK7_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 8.660e-8
Identity = 40/106 (37.74%), Postives = 61/106 (57.55%), Query Frame = 0 
Query:    1 MSLNGAIVRVGAGAAAVARSALGKPSYGGAALAVTGRRSMTTFQERERGEETVYMRKEDKRLLENLLKKERAHHEAGKDVAKDELMAILGSHKLPSDVVDKLVAWK 106
            M+L  A +RVG     V+ +AL  P+   +  A+ G     +F ERE+GEE V++R+++K LL  L +         K +A  EL  +LG H+LP DV++KL+ WK
Sbjct:    1 MALRLAALRVGQ----VSSAALRTPAIAISTRAMNG---YISFNEREKGEELVHIRQQEKELLLKLRQ--------NKKIANVELKELLGPHQLPDDVLEKLIEWK 91
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig89.16868.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YNK7_9STRA8.660e-837.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig89contigE-siliculosus-1a_M_contig89:137478..139392 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig89.16868.1mRNA_E-siliculosus-1a_M_contig89.16868.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig89 137478..140195 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig89.16868.1 ID=prot_E-siliculosus-1a_M_contig89.16868.1|Name=mRNA_E-siliculosus-1a_M_contig89.16868.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=110bp
MSLNGAIVRVGAGAAAVARSALGKPSYGGAALAVTGRRSMTTFQERERGE
ETVYMRKEDKRLLENLLKKERAHHEAGKDVAKDELMAILGSHKLPSDVVD
KLVAWKSSH*
back to top