prot_E-siliculosus-1a_M_contig88.16853.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig88.16853.1
Unique Nameprot_E-siliculosus-1a_M_contig88.16853.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length132
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig88.16853.1 vs. uniprot
Match: D8LKF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF2_ECTSI)

HSP 1 Score: 245 bits (625), Expect = 5.280e-74
Identity = 121/132 (91.67%), Postives = 127/132 (96.21%), Query Frame = 0
Query:    1 EPVVVIESSVLPGSNYGDSSSRPFQPLSSVEEDATITTTAASTHDRFEHVGCLELAEEEMVSLGRIKTKAEADIIPGVFGRDDMTPQECASICEGGGQDGFAVTRGDLCTCFAEADAGIFDERKGGVCDAPC 132
            EPVVVIE SVLPGSNYGDSSSRPFQPLSSV+EDAT TTTAASTHDRFEHVGCL+LAEEEMVSLGRI+TKAEADIIPGVFGRDDMTPQ+CA+ICEG GQDGFAVTRG+LCTCFAEADAGIFD  KGGVCDAPC
Sbjct:  359 EPVVVIEPSVLPGSNYGDSSSRPFQPLSSVDEDAT-TTTAASTHDRFEHVGCLKLAEEEMVSLGRIETKAEADIIPGVFGRDDMTPQQCAAICEGVGQDGFAVTRGNLCTCFAEADAGIFDGSKGGVCDAPC 489          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16853.1 vs. uniprot
Match: D8LKF8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF8_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 1.800e-73
Identity = 120/132 (90.91%), Postives = 127/132 (96.21%), Query Frame = 0
Query:    1 EPVVVIESSVLPGSNYGDSSSRPFQPLSSVEEDATITTTAASTHDRFEHVGCLELAEEEMVSLGRIKTKAEADIIPGVFGRDDMTPQECASICEGGGQDGFAVTRGDLCTCFAEADAGIFDERKGGVCDAPC 132
            EPVVVIE SVLPGSNYGDSSSRPFQPL SV+EDAT TTTAASTHDRFEHVGCL+L EEEM+SLGRI+TKAEADIIPGVFGRDDMTPQ+CA ICEGGGQDGFAVTRGDLCTCFAEADAGIF++RKGGVCDAPC
Sbjct: 1405 EPVVVIEPSVLPGSNYGDSSSRPFQPLLSVDEDAT-TTTAASTHDRFEHVGCLKLTEEEMISLGRIETKAEADIIPGVFGRDDMTPQQCAVICEGGGQDGFAVTRGDLCTCFAEADAGIFEDRKGGVCDAPC 1535          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16853.1 vs. uniprot
Match: A0A6H5KV41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV41_9PHAE)

HSP 1 Score: 234 bits (596), Expect = 1.480e-71
Identity = 116/132 (87.88%), Postives = 122/132 (92.42%), Query Frame = 0
Query:    1 EPVVVIESSVLPGSNYGDSSSRPFQPLSSVEEDATITTTAASTHDRFEHVGCLELAEEEMVSLGRIKTKAEADIIPGVFGRDDMTPQECASICEGGGQDGFAVTRGDLCTCFAEADAGIFDERKGGVCDAPC 132
            EPVVVIE SVLPGSNYG+SSS PFQ LSSV++DAT TT AASTHDRFEHVGCL+LAEEEMVSLGRIKTKAEAD IPGVFGRDDMTPQECA+ICE  GQDGFAVTRGD CTCFAE DAGIFD+RKGGVCDAPC
Sbjct:    6 EPVVVIEPSVLPGSNYGNSSSLPFQQLSSVDKDAT-TTIAASTHDRFEHVGCLKLAEEEMVSLGRIKTKAEADTIPGVFGRDDMTPQECAAICEDRGQDGFAVTRGDRCTCFAEVDAGIFDDRKGGVCDAPC 136          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16853.1 vs. uniprot
Match: A0A6H5KL41_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL41_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 3.120e-68
Identity = 117/168 (69.64%), Postives = 122/168 (72.62%), Query Frame = 0
Query:    1 EPVVVIESSVLPGSNY-GDSSSRPFQPLSSVEEDATITTTAASTHD-----------------------------------RFEHVGCLELAEEEMVSLGRIKTKAEADIIPGVFGRDDMTPQECASICEGGGQDGFAVTRGDLCTCFAEADAGIFDERKGGVCDAPC 132
            EPVVVIE SVLPGSNY GDSSS PFQPLSSV++DAT TTTAASTHD                                    FEHVGCL+LAEEEMVSL RIKTKAEADIIPGVFGRDDMTP  CA+ICEG GQDGFAVTRGDLCTCF EAD GIFD+RKGGVCDAPC
Sbjct:    3 EPVVVIEPSVLPGSNYVGDSSSLPFQPLSSVDKDAT-TTTAASTHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHFEHVGCLKLAEEEMVSLRRIKTKAEADIIPGVFGRDDMTPLGCAAICEGRGQDGFAVTRGDLCTCFTEADTGIFDDRKGGVCDAPC 169          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16853.1 vs. uniprot
Match: D8LK84_ECTSI (Beta 1,3 exoglucanase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK84_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 4.640e-20
Identity = 54/117 (46.15%), Postives = 65/117 (55.56%), Query Frame = 0
Query:   19 SSSRPF--QPLSSVEEDATITTTAASTHDRFEHVGCLELAEEEMVSLGRIKTKAEADIIPGVFGRDDMTPQECASICEGGGQDGFAVTRGDLCTCFAEAD-AGIFDERKGGVCDAPC 132
            SSS+P   QP       + +  TAA      EHVGC  L+  E+    RI     A  +  V  + DMTPQECA IC GGG D FAV+RGDL TC +EAD AG    R  GVC++PC
Sbjct:   45 SSSKPIALQPNKDNGAGSPMAITAAP-----EHVGCFTLSRMEVFLRNRITDNPRASTLVRVNSKADMTPQECAGICAGGGHDVFAVSRGDLFTCLSEADSAGFLGGRGNGVCNSPC 156          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig88.16853.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LKF2_ECTSI5.280e-7491.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LKF8_ECTSI1.800e-7390.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KV41_9PHAE1.480e-7187.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KL41_9PHAE3.120e-6869.64WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LK84_ECTSI4.640e-2046.15Beta 1,3 exoglucanase n=1 Tax=Ectocarpus siliculos... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 53..73
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 68..132
e-value: 3.2E-7
score: 30.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig88contigE-siliculosus-1a_M_contig88:668379..669021 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig88.16853.1mRNA_E-siliculosus-1a_M_contig88.16853.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig88 668377..669021 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig88.16853.1 ID=prot_E-siliculosus-1a_M_contig88.16853.1|Name=mRNA_E-siliculosus-1a_M_contig88.16853.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=132bp
EPVVVIESSVLPGSNYGDSSSRPFQPLSSVEEDATITTTAASTHDRFEHV
GCLELAEEEMVSLGRIKTKAEADIIPGVFGRDDMTPQECASICEGGGQDG
FAVTRGDLCTCFAEADAGIFDERKGGVCDAPC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002889WSC_carb-bd