prot_E-siliculosus-1a_M_contig88.16838.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig88.16838.1
Unique Nameprot_E-siliculosus-1a_M_contig88.16838.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length953
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig88.16838.1 vs. uniprot
Match: D8LKE3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKE3_ECTSI)

HSP 1 Score: 1206 bits (3120), Expect = 0.000e+0
Identity = 787/952 (82.67%), Postives = 802/952 (84.24%), Query Frame = 0 
Query:    1 MGRVREAQHQKGSVASGELLSYYAPMAQMQIPAGTRNRHQAHDVPTTTYAQLAWPPRGTSPEDGAAKLDDRQYGRNHCPPRSMPSAVAMDDDPAQRSPARPGPEESLPTAANPSDVLLVDLGSRSLLQEDLEKALRLWTRPSILIAGRNSLDRLPANVPGTILYLDLSWNRLASLEGFAALPNLRELDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKTKVDVRALSLNAALRRLRIEGNPYCSTGVQHGTYQIALQHLLPGMTLLDGKPPPVLSLSRSSTMPLPXXXXXXXPGKPADHHRHNSRRMPHRTSRGAPSSCSPDRRGSGSIREGFMASSSLDFVGDLSVERRWRDSAVAGRSLYPQFAPDSHQRAAASGGVRGGARVRGGGDGDGGRGREPCIKVTTGGGGPTVAPGSYAEIFVAAMRKEGSTSRAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRPGKRRTPAGGADRGAARREAWSQARREGAVGDGKMQGERTSHRQRNIAPGVGGGDLARNRRALGVRSLEPTTRSARRRTPVAAASSRHPRQASGAGGDQAFDTDGSAGGVGGGTSSSSKLGRRGTVGPRISARSNSGSNVRGGRRVGGDSWAKPGATRKPASISNSRSRQTPSTASRGETVTVSGRGGTRSGXXXXXKTARSALSKDNRAXXXXXGRPDGNVRSPSRYRFRTTLGRRGSQQPPRPPAPVASPWTPREDARPWGWDGGKGGDRAGGXXXXXXXXXXXXXIRDVDAIAHDDHVLGYGDGGSGGEGTFVSPLSTAGILHRVSSSRRSSAVVAGLSAPPSAATASSGAVQRGDRPQHQAGAPRNQWKDSDPGVRESGXXXXXXXXXTEAVFRGGASKRKRPRLFSFRRRGRRWERGWPNGRDVPRSNP 952
            MGRVREAQHQKGSVASGELL YYAPM QM+IPAGTRNRHQA+DVPTTTYAQLAWPP+GTSPEDGAAKLDDRQYGRNHCPPRSMPSAVAMDDDPA RSPARPGPEESLPTAANPSDVLLVDLGSRSLLQEDLEKALRLWTRPSILIAGRNSLDRLPANVPGTILYLDLSWNRLASLEGFAALPNLRELDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKTKVDVRALSLNAALRRLRIEGNPYCSTGVQHGTYQIALQHLLPGM+LLDGK PPVLSLS SSTMPLPXXXXXXX GKP DHHRHNSRRMPHRTSRG PSSCSPDRRGSGSIREGFMASSSLDFVGDLSVERRWRDSAVAGRS   QF PDSHQRA A GGVRGG RVRGGGDG+GGRGREPCIKVTTGGGGPTVAPGSYAEIFVA MRKEGSTSR          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                             RGAARREAWSQARREGAVGDGKMQ +RTSHRQR +APGVGGGD+ARNRRALGVRSLEPTTRSARRRTP      RHPRQASGAGGDQAFDTDGSAGGVG    SSSKLGR G V PRIS RSNSGSN R GRRVGGDSWAKPGATRKPASISNSRSRQTPSTASRGETVTV GRGGTRSG     KTARSALSKD+RA     G+P+GN RSPS YRFRTTLGRRGSQQPPRP APVASPWTPREDARPWGW GGKG DR G         XXX  IR VDAIAHDD VLGYGDGGSGGEGTFVSPLSTAGILHR+SSSRR                  SGAVQ GDRPQHQAGAPRNQW+DS+PGVRESGXXXXXXXXX                        R WERG  NGRDVPR +P
Sbjct:    1 MGRVREAQHQKGSVASGELLPYYAPMTQMKIPAGTRNRHQAYDVPTTTYAQLAWPPKGTSPEDGAAKLDDRQYGRNHCPPRSMPSAVAMDDDPAPRSPARPGPEESLPTAANPSDVLLVDLGSRSLLQEDLEKALRLWTRPSILIAGRNSLDRLPANVPGTILYLDLSWNRLASLEGFAALPNLRELDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKTKVDVRALSLNAALRRLRIEGNPYCSTGVQHGTYQIALQHLLPGMSLLDGKAPPVLSLSLSSTMPLPXXXXXXXXGKPGDHHRHNSRRMPHRTSRGTPSSCSPDRRGSGSIREGFMASSSLDFVGDLSVERRWRDSAVAGRS---QFTPDSHQRAVARGGVRGGVRVRGGGDGNGGRGREPCIKVTTGGGGPTVAPGSYAEIFVAGMRKEGSTSRVGIDDPAAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------QRGAARREAWSQARREGAVGDGKMQEQRTSHRQRKVAPGVGGGDIARNRRALGVRSLEPTTRSARRRTPAXXXXXRHPRQASGAGGDQAFDTDGSAGGVGXXXXSSSKLGRGGAVNPRISVRSNSGSNARVGRRVGGDSWAKPGATRKPASISNSRSRQTPSTASRGETVTVRGRGGTRSGGGG--KTARSALSKDSRAEGSGGGKPNGNARSPSSYRFRTTLGRRGSQQPPRPTAPVASPWTPREDARPWGWGGGKGSDRGG------DEDXXXDEIRVVDAIAHDDRVLGYGDGGSGGEGTFVSPLSTAGILHRISSSRRXXXXXXXXXXXXXXXXXXSGAVQTGDRPQHQAGAPRNQWQDSEPGVRESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-WERGSSNGRDVPRRSP 912
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BLAST of mRNA_E-siliculosus-1a_M_contig88.16838.1 vs. uniprot
Match: A0A6H5JHT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT2_9PHAE)

HSP 1 Score: 1170 bits (3027), Expect = 0.000e+0
Identity = 706/963 (73.31%), Postives = 723/963 (75.08%), Query Frame = 0 
Query:    2 GRVREAQHQKGSVASGELLSYYAPMAQMQIPAGTRNRHQAHDVPTTTYAQLAWPPRGTSPEDGAAKLDDRQYGRNHCPPRSMPSAVAMDDDPAQRSPARPGPEESLPTAANPSDVLLVDLGSRSLLQEDLEKALRLWTRPSILIAGRNSLDRLPANVPGTILYLDLSWNR---------------------------LASLEGFAALPNLRELDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKTKVDVRALSLNAALRRLRIEGNPYCSTGVQHGTYQIALQHLLPGMTLLDGKPPPVLSLSRSSTMPLPXXXXXXXPGKPADHHRHNSRRMPHRTSRGAPSSCSPDRRGSGSIREGFMASSSLDFVGDLSVERRWRDSAVAGRSLYPQFAPDSHQRAAASGGVRGGARVRGGGDGDGGRGREPCIKVTTGGGGPTVAPGSYAEIFVAAMRKEGSTSRAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRPGKRRTPAGGAD----------------------------RGAARREAWSQARREGAVGDGKMQGERTSHRQRNIAPGVGGGDLARNRRALGVRSLEPTTRSARRRTPV--------AAASSRHPRQASGAGGDQAFDTDGSAGGVGGGTSSSSKLGRRGTVGPRISARSNSGSNVRGGRRVGGDSWAKPGATRKPASISNSRSRQTPSTASRGETVTVSGRGGTRSGXXXXXKTARSALSKDNRAXXXXXGRPDGNVRSPSRYRFRTTLGRRGSQQPPRPPAPVASPWTPREDARPWGWDGGKGGDRAGGXXXXXXXXXXXXXIRDVDAIAHDDHVLGYGDGGSGGEGTFVSPLSTAGILHRVSSSRRSSAVVAGLSAPPSAATASSGAVQRGDRPQHQAGAPRNQWKDSDPGVRESG 901
            GRVREAQH+KGSVASGELLSY+APMAQMQIP GTRNRHQAHDVPTTTYAQLAWPP+GTSPEDG  KLDDRQYGRNHCPPRSMPSAVAMDDDPA RSPARPGPEESLPTAANPSDVLLVDLGSR LLQEDLEKALRLWTRPSILIAGRNSLDRLPANVPGTILYLDLSWNR                           LASLEGFAALPNLRELDVS                        XXXXXXXXXXXXXXXXXXXXXX LKTK DVRALSLNAALRRLRIEGNPYCSTGVQHGTYQIALQHLLPGM LLDGKPP VLSLS SSTMPL XXXXXXX GKPADHHRHNSRRMPHRTSRG PSSCSPDRRGSGSIREGFMA+SSLDFVGDLSVERRWRDSAVAG+SLYPQFAPDSHQRAAASGGVRGGAR R         GREPCIKVTTGGGGPTVAPGSYAEIFVAAMRK+GSTSRAV                                                            +RPGKRR PAGGA+                            RGAARREAWSQARREGAVGDGKMQG+R S  QRNIAPGVGGG +ARN+RA+GVRSLEPTTRSARRRT V        AAASSRHPRQASG GGDQAFDTDGSA GVGGGTSSSSKLGR G VGPRIS RSNSGSN RGGRR GGD WAKPGATRKP SISNSRSRQTPSTAS GE VT  GRGGTRSG     KTARSALSKD+RA     GRP+GN RSPS YRFRTTLGRRGSQQPPRPPAPVASPWTPREDARPWGWDGGK GDR  G             IRDVDAIA DDHVLGYGDG SGG+GTFVSPLSTAGILHR+SSSR                   SGAV RGD PQHQAGAPRNQW+DSDPGVRESG
Sbjct:   28 GRVREAQHRKGSVASGELLSYHAPMAQMQIPPGTRNRHQAHDVPTTTYAQLAWPPKGTSPEDGGPKLDDRQYGRNHCPPRSMPSAVAMDDDPAPRSPARPGPEESLPTAANPSDVLLVDLGSRLLLQEDLEKALRLWTRPSILIAGRNSLDRLPANVPGTILYLDLSWNRRVRSRYILLGATQHFPCPPLCSHPNQRLASLEGFAALPNLRELDVSHNSVQDMLGLGSNVNLRVLRISYNXXXXXXXXXXXXXXXXXXXXXXXLKTKEDVRALSLNAALRRLRIEGNPYCSTGVQHGTYQIALQHLLPGMRLLDGKPPQVLSLSLSSTMPLXXXXXXXXXGKPADHHRHNSRRMPHRTSRGPPSSCSPDRRGSGSIREGFMAASSLDFVGDLSVERRWRDSAVAGKSLYPQFAPDSHQRAAASGGVRGGARARXXXXXXXXXGREPCIKVTTGGGGPTVAPGSYAEIFVAAMRKQGSTSRAVVDDPAAFTTAGVSNSSTLAPTQKGVVGTVATERQQQQQPGHRAAAQASHGETSVAAA---YRPGKRRIPAGGAEVXXXXXXXXXXXAATASLLSYRGLSRAERGAARREAWSQARREGAVGDGKMQGQRASRWQRNIAPGVGGGGVARNKRAVGVRSLEPTTRSARRRTSVSGSQMCRVAAASSRHPRQASGTGGDQAFDTDGSAEGVGGGTSSSSKLGRGGAVGPRISVRSNSGSNARGGRRSGGDLWAKPGATRKPVSISNSRSRQTPSTASGGEAVTTRGRGGTRSGDGE--KTARSALSKDSRAGGSGGGRPNGNDRSPSSYRFRTTLGRRGSQQPPRPPAPVASPWTPREDARPWGWDGGKEGDRGHGEDDEDDE------IRDVDAIADDDHVLGYGDGSSGGKGTFVSPLSTAGILHRISSSRXXXXXXXXXXXXXXXXXXXSGAVLRGDCPQHQAGAPRNQWQDSDPGVRESG 979
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig88.16838.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKE3_ECTSI0.000e+082.67Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JHT2_9PHAE0.000e+073.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 181..202
e-value: 350.0
score: 3.0
coord: 203..224
e-value: 0.79
score: 18.7
coord: 159..180
e-value: 390.0
score: 2.6
coord: 225..246
e-value: 290.0
score: 3.7
NoneNo IPR availablePANTHERPTHR15454:SF7SD03973Pcoord: 130..331
NoneNo IPR availablePANTHERPTHR15454NISCHARIN RELATEDcoord: 130..331
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 158..291
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 150..294
e-value: 1.6E-25
score: 91.1
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 183..204
score: 6.842
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 227..248
score: 5.317
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 161..182
score: 7.442
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 205..226
score: 8.39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig88contigE-siliculosus-1a_M_contig88:518706..522953 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig88.16838.1mRNA_E-siliculosus-1a_M_contig88.16838.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig88 518706..522953 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig88.16838.1 ID=prot_E-siliculosus-1a_M_contig88.16838.1|Name=mRNA_E-siliculosus-1a_M_contig88.16838.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=953bp
MGRVREAQHQKGSVASGELLSYYAPMAQMQIPAGTRNRHQAHDVPTTTYA
QLAWPPRGTSPEDGAAKLDDRQYGRNHCPPRSMPSAVAMDDDPAQRSPAR
PGPEESLPTAANPSDVLLVDLGSRSLLQEDLEKALRLWTRPSILIAGRNS
LDRLPANVPGTILYLDLSWNRLASLEGFAALPNLRELDVSHNSVQDMLGL
VSNVDLRVLRISHNRIRRIEGIHQLKRLEEVDFSHNLLKTKVDVRALSLN
AALRRLRIEGNPYCSTGVQHGTYQIALQHLLPGMTLLDGKPPPVLSLSRS
STMPLPPPPRPPTPGKPADHHRHNSRRMPHRTSRGAPSSCSPDRRGSGSI
REGFMASSSLDFVGDLSVERRWRDSAVAGRSLYPQFAPDSHQRAAASGGV
RGGARVRGGGDGDGGRGREPCIKVTTGGGGPTVAPGSYAEIFVAAMRKEG
STSRAVVDDPAAATTAGVSKSSTLAPTQKGAAGAAATQRQQQQHSGHRAA
AQAPHGETAAAAAAAAHRPGKRRTPAGGADRGAARREAWSQARREGAVGD
GKMQGERTSHRQRNIAPGVGGGDLARNRRALGVRSLEPTTRSARRRTPVA
AASSRHPRQASGAGGDQAFDTDGSAGGVGGGTSSSSKLGRRGTVGPRISA
RSNSGSNVRGGRRVGGDSWAKPGATRKPASISNSRSRQTPSTASRGETVT
VSGRGGTRSGGGGGGKTARSALSKDNRAGGSGGGRPDGNVRSPSRYRFRT
TLGRRGSQQPPRPPAPVASPWTPREDARPWGWDGGKGGDRAGGEDDEDGE
DGEDNEIRDVDAIAHDDHVLGYGDGGSGGEGTFVSPLSTAGILHRVSSSR
RSSAVVAGLSAPPSAATASSGAVQRGDRPQHQAGAPRNQWKDSDPGVRES
GGGGASSAAATEAVFRGGASKRKRPRLFSFRRRGRRWERGWPNGRDVPRS
NP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf