prot_E-siliculosus-1a_M_contig88.16833.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig88.16833.1
Unique Nameprot_E-siliculosus-1a_M_contig88.16833.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length913
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig88.16833.1 vs. uniprot
Match: A0A6H5JA01_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JA01_9PHAE)

HSP 1 Score: 662 bits (1707), Expect = 6.490e-222
Identity = 737/951 (77.50%), Postives = 747/951 (78.55%), Query Frame = 0
Query:   13 MPGPAARLAVLSLLAGGTYCDAACPSGTRASAGHDSAAAFVSYVPVTASFNPFSRVRKAAKRAIPGTRPESDEKTLGQALPGGRPLLSLTPVKAEGSDGAPTPPAPNAAGXXXXXXXXXXXXXXXXXXXXXAGGSIKEAISAFSKGEIAKSDLEKLVKEKEAVELKAAEQRQSESLRQAAKAKSQLAAKEKMDALMVAGAAATVGLVAGGLGDGAFAGGDAPWAPPAGAVALGGLGYAAATTDGVVGENTRRVIGGFVAWLLASLKEAASSAVDNAKSSATKKVDETVASIKAVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVPDKXXXXXXXXXXXXXXXXXXXADAKVKELTAIPNKVIGDAVSKVEAVLPTPPAPKPAAPKPPXXXXXXXXXXXXXPSKXAGAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTPPKAAPKPAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAAAKKPAPSSPFGGLFGGNGGNGAKVAAPKPTAAAPAKKAPPVSXXXXXXXXXXXXXXXSSPFGGLFGGN---------------------------------------------------GGNGAKPAAPKPAAAAPAKKXPAPAAPKAXXXXXXXXXXXXXXXXXXXXXXEAVPATPPAAAVKKAPMLSAXXXXXXXXXXXXXXXXXXXXXXXXAPKVVVAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESKAATGPAPAGRKAPAPAKGAAAATFFKPALVKQLSKKMNEDQLKKLDAMTAKYANSGSPTAYVNSAAQLVGKGVMSDILPDLVGSLPQGKQKSDLFTVYSTY 912
            MPGPAARLAVLSLLAGGTYCDAACPSGTRAS GHDSAAAFVS+VPVTASFNPFSRVRKA KRAIPGTRPESDE TLGQALPGGRPLLSLTPVKAEGSDGAP PPAP    XXXXXXXXXXXXXXX      AGGSIKEAISAFSKGEIAKSDLEKLVKEKEAVEL+AAEQRQ+E+LRQAA+AK+Q+AAKEKMDALMVAGA ATVGLVAGGLGDGAFAGGDAPWAPP GAVALGGLGYAAATTDGVVGENTRRVIGGFVAWLLASLKEAASSAVDNAKSSATKKVDETVASIKAVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     XXXXXXXXXXXXXXXXXXX    VKELTAIPNKVIGDAVSKVEAVLPTPPAPKPAAPK       XXXXXXXX SK A A  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    XXXXXXXXXXXXXXXX         PSSPFGGLFGGN         PKPT AAPAKKAPP SXX       XXXXX SSPFGGLF  N                                                   GGNGAKPAAPKPAAAAPAK+XPAPAAPKAXXXXXXXXXXXXXXXXXXXXXX    ATPPAAAVKKAPMLSA         XXX        XXXXAP+VV   XXX             XXX               ESKAAT PAPAGRKAPAPAKGAAA TFFKPALVKQLSKKMNEDQLKKLDAMTAKYANSGSPTAYVNSAAQLVGKGV+SDILPDLVGSLPQGKQKSDLFTVYSTY
Sbjct:    1 MPGPAARLAVLSLLAGGTYCDAACPSGTRASPGHDSAAAFVSHVPVTASFNPFSRVRKAGKRAIPGTRPESDETTLGQALPGGRPLLSLTPVKAEGSDGAPPPPAPXXXXXXXXXXXXXXXXXXXPGEAPPAGGSIKEAISAFSKGEIAKSDLEKLVKEKEAVELEAAEQRQAETLRQAAQAKAQVAAKEKMDALMVAGATATVGLVAGGLGDGAFAGGDAPWAPPVGAVALGGLGYAAATTDGVVGENTRRVIGGFVAWLLASLKEAASSAVDNAKSSATKKVDETVASIKAVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVKELTAIPNKVIGDAVSKVEAVLPTPPAPKPAAPK------AXXXXXXXXXSKPAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAPLRTKSGVKATSAPVAAXXXXXXXXXXXXXXXXXXXXXXXXXPSSPFGGLFGGNXXXXXXXXXPKPTVAAPAKKAPPASXXSTASKAKXXXXXPSSPFGGLFXXNXXXXXXPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGNGAKPAAPKPAAAAPAKEXPAPAAPKAXXXXXXXXXXXXXXXXXXXXXXXXXXATPPAAAVKKAPMLSAPLRSASKPAXXXPAPKAAPKXXXXAPRVVAKXXXXAAAKKPAPAASGGXXXMFGMFGGGG------ESKAATSPAPAGRKAPAPAKGAAATTFFKPALVKQLSKKMNEDQLKKLDAMTAKYANSGSPTAYVNSAAQLVGKGVISDILPDLVGSLPQGKQKSDLFTVYSTY 934          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16833.1 vs. uniprot
Match: A0A6U4HT34_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4HT34_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 8.950e-9
Identity = 60/162 (37.04%), Postives = 86/162 (53.09%), Query Frame = 0
Query:  148 IKEAISAFSKGEIAKSDLEKLVKEKEAVELKAAEQRQSESLRQAAKAKSQLAAKEKMD--ALMVAGAAATVGLVAGGLGDGAFAGGDAPWAPPAGAVALGGLGYAAATTDGVVGENTRRVIGGFVAWLLASLKEAASSAVDNAKSSATKKVDETVASIKAVP 307
            + E +   + G+I+  D EK + EKEA    AAE+ +       A  K+++A K+++D  A+  A + AT+GLV GGL DGA A GDAPWAP AG    G   YA A  D  VGE  R   GG       ++  AA+   +   ++A  + D+  A IK +P
Sbjct:   47 VPELVEDLTAGKISTEDFEKALVEKEAA--MAAEKAK-------ALEKTRIARKKELDTEAIYAAASGATIGLVTGGLLDGALANGDAPWAPVAGLAVGGAALYAGARLDNKVGEVLRFSFGGLAQGTQKAVTGAATDFSEGVTAAAKSQADKIQADIKGIP 199          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16833.1 vs. uniprot
Match: A0A7R9YG73_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YG73_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 2.010e-8
Identity = 53/125 (42.40%), Postives = 67/125 (53.60%), Query Frame = 0
Query:  186 ESLRQAAKAKSQLAAKE---KMDALMVAGAAATVGLVAGGLGDGAFAGGDAPWAPPAGAVALGGLGYAAATTDGVVGENTRRVIGGFVAWLLASLKEAASSAVDNAKSSATKKVDETVASIKAVP 307
            E  R AAK K++ AAK+   + +A  VA + AT+GLVAGGL DGA A GDAPWAP  G    GGL YA    D  +GE  R   GG      A++  AA    D     A  +V+    SI++ P
Sbjct:   73 EEERLAAKKKTEAAAKKAELRKEAAYVAASGATIGLVAGGLLDGALANGDAPWAPIVGLGVGGGLLYAGGNLDNKLGEVLRFSFGGLAQGTQAAVTNAAKGTADAVVQGAKAQVENAKTSIQSAP 197          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig88.16833.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JA01_9PHAE6.490e-22277.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6U4HT34_9STRA8.950e-937.04Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7R9YG73_9STRA2.010e-842.40Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 165..197
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..34
score: 0.467

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig88contigE-siliculosus-1a_M_contig88:410125..419009 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig88.16833.1mRNA_E-siliculosus-1a_M_contig88.16833.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig88 410125..420620 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig88.16833.1 ID=prot_E-siliculosus-1a_M_contig88.16833.1|Name=mRNA_E-siliculosus-1a_M_contig88.16833.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=913bp
MLEGCRADIPSRMPGPAARLAVLSLLAGGTYCDAACPSGTRASAGHDSAA
AFVSYVPVTASFNPFSRVRKAAKRAIPGTRPESDEKTLGQALPGGRPLLS
LTPVKAEGSDGAPTPPAPNAAGKDGAASPPPAGSSAAPGGAPPAGGSIKE
AISAFSKGEIAKSDLEKLVKEKEAVELKAAEQRQSESLRQAAKAKSQLAA
KEKMDALMVAGAAATVGLVAGGLGDGAFAGGDAPWAPPAGAVALGGLGYA
AATTDGVVGENTRRVIGGFVAWLLASLKEAASSAVDNAKSSATKKVDETV
ASIKAVPDNAQAAAKQKVDDLVAYIKSIPDTIAGAAKAAVKSAQDDAKAK
ADSIIADIKAAPKNLQKEAAKAGEAALGELKKVPDKVTDAATEAATSAAD
TAKKTADAKVKELTAIPNKVIGDAVSKVEAVLPTPPAPKPAAPKPPAAPK
PPAAPKPPAPSKPAGAPTPAAPKPPAPKPPAASAARSSPVKPSPPPPPAA
AVKTPPKAAPKPAVKKPAPAKPAAKFTAKSVAAPTPQKKAAAAAPPAPAA
PPAAAAPAKKMPPLSAPLRTKSGVKATSAPVAAAAASPAKKGPAADAAPP
AAAAKKPAPSSPFGGLFGGNGGNGAKVAAPKPTAAAPAKKAPPVSPPSAA
SKAKAKAKAPSSPFGGLFGGNGGNGAKPAAPKPAAAAPAKKAPAPAAPKA
KAPASPFGGLFGGNGGGAEKKKEAVPATPPAAAVKKAPMLSAPLRSASKP
AAAKPAPKAAPKKAAPAPKVVVAKKAAPAAAKKPAPAASGGGGGMFGMFG
GGGGGGGGESKAATGPAPAGRKAPAPAKGAAAATFFKPALVKQLSKKMNE
DQLKKLDAMTAKYANSGSPTAYVNSAAQLVGKGVMSDILPDLVGSLPQGK
QKSDLFTVYSTY*
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