prot_E-siliculosus-1a_M_contig88.16827.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig88.16827.1
Unique Nameprot_E-siliculosus-1a_M_contig88.16827.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length225
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig88.16827.1 vs. uniprot
Match: D8LK84_ECTSI (Beta 1,3 exoglucanase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK84_ECTSI)

HSP 1 Score: 272 bits (695), Expect = 9.200e-90
Identity = 136/159 (85.53%), Postives = 143/159 (89.94%), Query Frame = 0
Query:   67 AAMRRALEADEPGKANTIDELHDRNNDAAKDEKGDPIGVWAPSSSKPVVLQPHQDSGVGSPVAITVAAEHVGCFTLSRMEVFLRNRITDNPRASTPLRVNSKADMTPQECAGICAGGGSDVFAVSRGDLFTCLSEADSAGFLRGRGNGVCNSPCTGDAS 225
            AAMR  +E D PGKANTIDEL D NND A DEKGDPIGV APSSSKP+ LQP++D+G GSP+AIT A EHVGCFTLSRMEVFLRNRITDNPRAST +RVNSKADMTPQECAGICAGGG DVFAVSRGDLFTCLSEADSAGFL GRGNGVCNSPCTGDAS
Sbjct:    3 AAMRTVVERDAPGKANTIDELPDMNNDDATDEKGDPIGVLAPSSSKPIALQPNKDNGAGSPMAITAAPEHVGCFTLSRMEVFLRNRITDNPRASTLVRVNSKADMTPQECAGICAGGGHDVFAVSRGDLFTCLSEADSAGFLGGRGNGVCNSPCTGDAS 161          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16827.1 vs. uniprot
Match: A0A6H5J7Z3_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7Z3_9PHAE)

HSP 1 Score: 226 bits (575), Expect = 2.520e-71
Identity = 114/143 (79.72%), Postives = 125/143 (87.41%), Query Frame = 0
Query:   84 IDELHDRNNDAAKDEKGDPIGVWAPSSSKPVVLQ-PHQDSGVGSPVAITVAAEHVGCFTLSRMEVFLRNRITDNPRASTPLRVNSKADMTPQECAGICAGGGSDVFAVSRGDLFTCLSEADSAGFLRGRGNGVCNSPCTGDAS 225
            + +L D N DAA DE+G  IGV APSSSKPVVL+ P++D+GVGSP+AIT A EHVGCFTL+RMEVFLRNRI DNPR ST +RV+SKADMTP ECAGICAGGGSD FAVSRGDLFTCLSE DS GFLRGRGNGVCNSPCTGDAS
Sbjct:   27 VHQLPDMNYDAATDEEGHTIGVLAPSSSKPVVLEEPNEDNGVGSPMAITAAPEHVGCFTLTRMEVFLRNRIIDNPRGSTLVRVHSKADMTPLECAGICAGGGSDGFAVSRGDLFTCLSEGDSGGFLRGRGNGVCNSPCTGDAS 169          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16827.1 vs. uniprot
Match: D8LK89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK89_ECTSI)

HSP 1 Score: 176 bits (446), Expect = 1.450e-53
Identity = 88/98 (89.80%), Postives = 90/98 (91.84%), Query Frame = 0
Query:  128 VAITVAAEHVGCFTLSRMEVFLRNRITDNPRASTPLRVNSKADMTPQECAGICAGGGSDVFAVSRGDLFTCLSEADSAGFLRGRGNGVCNSPCTGDAS 225
            +AIT A EHVGCFTLSRMEVFLRNRITDNPRAST +RVNSKADMTPQEC GICAGGGS VFAVSR DLFT LSEADSAGFL GRGNGVCNSPCTGDAS
Sbjct:    1 MAITAAPEHVGCFTLSRMEVFLRNRITDNPRASTLVRVNSKADMTPQECVGICAGGGSVVFAVSRCDLFTSLSEADSAGFLGGRGNGVCNSPCTGDAS 98          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16827.1 vs. uniprot
Match: A0A6H5KIS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIS5_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 3.920e-28
Identity = 58/82 (70.73%), Postives = 67/82 (81.71%), Query Frame = 0
Query:   93 DAAKDEKGDPIGVWAPSSSKPVVLQP-HQDSGVGSPVAITVAAEHVGCFTLSRMEVFLRNRITDNPRASTPLRVNSKADMTP 173
            D A DE+G  IGV APSSSKPV+L+  ++D+ VG P+AIT A EHVGCF LSR+EVFLRNRITDNPR ST LRV SKAD+TP
Sbjct:    4 DVATDEEGHTIGVLAPSSSKPVILEESNEDNRVGLPMAITAAPEHVGCFMLSRVEVFLRNRITDNPRGSTLLRVYSKADITP 85          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16827.1 vs. uniprot
Match: D8LKF8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF8_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 7.860e-19
Identity = 55/126 (43.65%), Postives = 71/126 (56.35%), Query Frame = 0
Query:  102 PIGVWAPSSSKPV--VLQPHQDSGVGSPVAITVAAEHVGCFTLSRMEVFLRNRITDNPRASTPLRVNSKADMTPQECAGICAGGGSDVFAVSRGDLFTCLSEADSAGFLRGRGNGVCNSPCTGDAS 225
            P   +  SSS+P   +L   +D+   +  +     EHVGC  L+  E+    RI     A     V  + DMTPQ+CA IC GGG D FAV+RGDL TC +EAD AG    R  GVC++PCTGD+S
Sbjct: 1416 PGSNYGDSSSRPFQPLLSVDEDATTTTAASTHDRFEHVGCLKLTEEEMISLGRIETKAEADIIPGVFGRDDMTPQQCAVICEGGGQDGFAVTRGDLCTCFAEAD-AGIFEDRKGGVCDAPCTGDSS 1540          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16827.1 vs. uniprot
Match: A0A6H5KL41_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL41_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 2.640e-16
Identity = 45/91 (49.45%), Postives = 54/91 (59.34%), Query Frame = 0
Query:  135 EHVGCFTLSRMEVFLRNRITDNPRASTPLRVNSKADMTPQECAGICAGGGSDVFAVSRGDLFTCLSEADSAGFLRGRGNGVCNSPCTGDAS 225
            EHVGC  L+  E+    RI     A     V  + DMTP  CA IC G G D FAV+RGDL TC +EAD+ G    R  GVC++PCTGD+S
Sbjct:   85 EHVGCLKLAEEEMVSLRRIKTKAEADIIPGVFGRDDMTPLGCAAICEGRGQDGFAVTRGDLCTCFTEADT-GIFDDRKGGVCDAPCTGDSS 174          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig88.16827.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LK84_ECTSI9.200e-9085.53Beta 1,3 exoglucanase n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5J7Z3_9PHAE2.520e-7179.72WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LK89_ECTSI1.450e-5389.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KIS5_9PHAE3.920e-2870.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKF8_ECTSI7.860e-1943.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KL41_9PHAE2.640e-1649.45WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 137..224
e-value: 8.4E-8
score: 32.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig88contigE-siliculosus-1a_M_contig88:356775..360045 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig88.16827.1mRNA_E-siliculosus-1a_M_contig88.16827.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig88 356775..360045 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig88.16827.1 ID=prot_E-siliculosus-1a_M_contig88.16827.1|Name=mRNA_E-siliculosus-1a_M_contig88.16827.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=225bp
SAGAELQCIEQGPTPIKAPSEALQGSIAPVVEIDGDSSSDEDAIPATAAT
TATPVGESGNTSDPQHAAMRRALEADEPGKANTIDELHDRNNDAAKDEKG
DPIGVWAPSSSKPVVLQPHQDSGVGSPVAITVAAEHVGCFTLSRMEVFLR
NRITDNPRASTPLRVNSKADMTPQECAGICAGGGSDVFAVSRGDLFTCLS
EADSAGFLRGRGNGVCNSPCTGDAS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002889WSC_carb-bd