prot_E-siliculosus-1a_M_contig88.16823.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig88.16823.1
Unique Nameprot_E-siliculosus-1a_M_contig88.16823.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length205
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig88.16823.1 vs. uniprot
Match: A0A6H5JM74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM74_9PHAE)

HSP 1 Score: 216 bits (551), Expect = 1.800e-68
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0 
Query:    1 MRCFHPGGSMKDVEGGASFAGKWSKELIGPLNPSGVEPTIYLTMSITSHKHAFSSIHEFTETTRRWERGADGELHQMRWMPDFNHWVLMLPPANAGALQ 99
            MRCFHPGGSMKDVEGGASFAGKWSKELIGPLNPSGVEPTIYLTMSITSHKHAFSSIHEFTETTRRWERGADGELHQMRWMPDFNHWVLMLPPANAGALQ
Sbjct:   91 MRCFHPGGSMKDVEGGASFAGKWSKELIGPLNPSGVEPTIYLTMSITSHKHAFSSIHEFTETTRRWERGADGELHQMRWMPDFNHWVLMLPPANAGALQ 189
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BLAST of mRNA_E-siliculosus-1a_M_contig88.16823.1 vs. uniprot
Match: A0A6H5JIG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIG7_9PHAE)

HSP 1 Score: 223 bits (568), Expect = 1.070e-67
Identity = 129/196 (65.82%), Postives = 137/196 (69.90%), Query Frame = 0 
Query:    1 MRCFHPGGSMKDVEGGASFAGKWSKELIGPLNPSGVEPTIYLTMSITSHKHAFSSIHEFTETTRRWERGADGELHQMRWMPDFNHWVLMLPPANAGALQIGEELAYWQRAKGAPGRAFVLDVKRAFLVAKKAGAEGATPEARRCRWRSTR-RLRKSELGPCQRPRCL--------YSMLSFVGGVVTRLPLLLPLA 187
            MRCFHPGGSMK VEGGASFAGKWSKELIGPL P+GVEPTIYLTM ITSHK AFSSIHEFTETT        G L Q RWMP+FNHWVLMLPPANA ALQ+       Q+AKGAP RAFVLDVKRA L+AKKAGA  A  EA      ST       + G  +R R L        +SMLS  GGV  RLPLLLPLA
Sbjct:  221 MRCFHPGGSMKHVEGGASFAGKWSKELIGPLKPAGVEPTIYLTMCITSHKQAFSSIHEFTETTV-------GGLRQTRWMPEFNHWVLMLPPANASALQVR------QKAKGAPDRAFVLDVKRAILLAKKAGANAAKVEAEAGTAESTAVPAEVDKAGVEERTRSLSATLFVTLFSMLSAAGGVAIRLPLLLPLA 403
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BLAST of mRNA_E-siliculosus-1a_M_contig88.16823.1 vs. uniprot
Match: A0A6H5JS69_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS69_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 5.020e-63
Identity = 94/99 (94.95%), Postives = 95/99 (95.96%), Query Frame = 0 
Query:    1 MRCFHPGGSMKDVEGGASFAGKWSKELIGPLNPSGVEPTIYLTMSITSHKHAFSSIHEFTETTRRWERGADGELHQMRWMPDFNHWVLMLPPANAGALQ 99
            MRCFHPGGSMKDVEGGASFAGKWSKEL+ PLNPSGVE TIYLTMSITSHKHAF SIHEFTETTRRWERG DGELHQMRWMPDFNHWVLMLPPANAGALQ
Sbjct:  227 MRCFHPGGSMKDVEGGASFAGKWSKELVSPLNPSGVESTIYLTMSITSHKHAFRSIHEFTETTRRWERGVDGELHQMRWMPDFNHWVLMLPPANAGALQ 325
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig88.16823.1 vs. uniprot
Match: A0A6H5KKT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKT7_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 1.300e-49
Identity = 97/168 (57.74%), Postives = 111/168 (66.07%), Query Frame = 0 
Query:   44 MSITSHKHAFSSIHEFTETTRRWERGADGELHQMRWMPDFNHWVLMLPPANAGALQ--IGEELAYWQRAKGAPGRAFVLDVKRAFLVAKKAGAEGATPEARRC------------RWRSTRRLRKSELGPCQRPRCLYSMLSFVGGVVTRLPLLLPLAAMMMIWMPRL 197
            M +TSH+  FSSI EFTETTRR ERG DGEL Q RWMP+FNHWVLMLPPANA  LQ    EELA+WQR K APGRA +LDVKRA LVA+ A    A  EA+              R  +  R R   + P  R   L+ MLS +GGV TRLPLLLPLA M+M+WMPR+
Sbjct:    1 MCVTSHEQEFSSIDEFTETTRRRERGLDGELRQKRWMPEFNHWVLMLPPANADVLQPQFSEELAFWQRVKEAPGRALMLDVKRALLVAQVARTAAADVEAKAVTAEVXXXXXXXDRAAAEERTRSLTVTPVVR---LFFMLSAMGGVTTRLPLLLPLAVMVMMWMPRI 165
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig88.16823.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JM74_9PHAE1.800e-68100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JIG7_9PHAE1.070e-6765.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JS69_9PHAE5.020e-6394.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKT7_9PHAE1.300e-4957.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..165
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 166..193
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 194..205
NoneNo IPR availableTMHMMTMhelixcoord: 172..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig88contigE-siliculosus-1a_M_contig88:339019..340070 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig88.16823.1mRNA_E-siliculosus-1a_M_contig88.16823.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig88 339019..340165 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig88.16823.1 ID=prot_E-siliculosus-1a_M_contig88.16823.1|Name=mRNA_E-siliculosus-1a_M_contig88.16823.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=205bp
MRCFHPGGSMKDVEGGASFAGKWSKELIGPLNPSGVEPTIYLTMSITSHK
HAFSSIHEFTETTRRWERGADGELHQMRWMPDFNHWVLMLPPANAGALQI
GEELAYWQRAKGAPGRAFVLDVKRAFLVAKKAGAEGATPEARRCRWRSTR
RLRKSELGPCQRPRCLYSMLSFVGGVVTRLPLLLPLAAMMMIWMPRLLGV
QGKLG
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