prot_E-siliculosus-1a_M_contig88.16817.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig88.16817.1
Unique Nameprot_E-siliculosus-1a_M_contig88.16817.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length439
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig88.16817.1 vs. uniprot
Match: A0A6H5J9Z0_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Z0_9PHAE)

HSP 1 Score: 290 bits (741), Expect = 2.320e-90
Identity = 149/173 (86.13%), Postives = 152/173 (87.86%), Query Frame = 0 
Query:    1 MTTNTLRLTLDEEDQAKQ--------QQTKPCATPRGFREIPLQITPSTWKTDLTKCNVCGDRFTWLNHRHKCRNCWQAVCNSCAKSRKVLRARTAPKRVCDTCIQNCWTPRTPAVTKPAAAAAAAGVTKADGDRRVSLTVSTSDHSCPVDATATAPLSPGTPAAAGFFGPGA 165
            MTT  LRLTL+E              QQ KPCATPRGFREIPLQITPSTWKTDLTKCNVCGDRFTWLNHRHKCRNCWQAVCNSCAKSRKV+RARTAPKRVCDTCIQNCWTPRTPAVTKPAAAA +  VTKADGDRRVSLTVSTSD SCPVDATATAPLSPGTPAAAGFFGPGA
Sbjct:    1 MTTTKLRLTLEEXXXXXXXXXXXXXXQQIKPCATPRGFREIPLQITPSTWKTDLTKCNVCGDRFTWLNHRHKCRNCWQAVCNSCAKSRKVIRARTAPKRVCDTCIQNCWTPRTPAVTKPAAAAGSV-VTKADGDRRVSLTVSTSDGSCPVDATATAPLSPGTPAAAGFFGPGA 172
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BLAST of mRNA_E-siliculosus-1a_M_contig88.16817.1 vs. uniprot
Match: D7G5L4_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5L4_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 3.070e-51
Identity = 80/82 (97.56%), Postives = 80/82 (97.56%), Query Frame = 0 
Query:    1 MTTNTLRLTLDEEDQAKQQQTKPCATPRGFREIPLQITPSTWKTDLTKCNVCGDRFTWLNHRHKCRNCWQAVCNSCAKSRKV 82
            MTTN LRLTLDEEDQAKQQQTKPCATPRGFREIPLQITPSTWKTDLTKCNVCGDRFTWLNHRHKCRNCWQAVCNSCAKSRK 
Sbjct:    1 MTTNKLRLTLDEEDQAKQQQTKPCATPRGFREIPLQITPSTWKTDLTKCNVCGDRFTWLNHRHKCRNCWQAVCNSCAKSRKT 82
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BLAST of mRNA_E-siliculosus-1a_M_contig88.16817.1 vs. uniprot
Match: D7G5L3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5L3_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 4.920e-13
Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = 0 
Query:  396 DEGGPMMVKLTPWTGVMMSAVAIGTGVAIAVVVRSAFSLVFFY 438
            DEGGPMMVKLTPWTGV+M AVAIGTGVAIAVVVRSA SLVFFY
Sbjct:  149 DEGGPMMVKLTPWTGVVMGAVAIGTGVAIAVVVRSAVSLVFFY 191
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig88.16817.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5J9Z0_9PHAE2.320e-9086.13FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G5L4_ECTSI3.070e-5197.56FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G5L3_ECTSI4.920e-1393.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000306FYVE zinc fingerSMARTSM00064fyve_4coord: 37..102
e-value: 7.5E-5
score: 31.2
IPR000306FYVE zinc fingerPFAMPF01363FYVEcoord: 42..99
e-value: 4.9E-9
score: 36.2
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 31..114
e-value: 5.9E-13
score: 50.3
NoneNo IPR availablePANTHERPTHR39490FAMILY NOT NAMEDcoord: 21..123
NoneNo IPR availablePANTHERPTHR39490:SF6ARRESTIN DOMAIN-CONTAINING PROTEIN Dcoord: 21..123
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 438..438
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..410
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 411..437
NoneNo IPR availableTMHMMTMhelixcoord: 406..428
IPR017455Zinc finger, FYVE-relatedPROSITEPS50178ZF_FYVEcoord: 43..96
score: 10.619
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 43..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig88contigE-siliculosus-1a_M_contig88:305994..313982 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig88.16817.1mRNA_E-siliculosus-1a_M_contig88.16817.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig88 304940..314123 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig88.16817.1 ID=prot_E-siliculosus-1a_M_contig88.16817.1|Name=mRNA_E-siliculosus-1a_M_contig88.16817.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=439bp
MTTNTLRLTLDEEDQAKQQQTKPCATPRGFREIPLQITPSTWKTDLTKCN
VCGDRFTWLNHRHKCRNCWQAVCNSCAKSRKVLRARTAPKRVCDTCIQNC
WTPRTPAVTKPAAAAAAAGVTKADGDRRVSLTVSTSDHSCPVDATATAPL
SPGTPAAAGFFGPGATAAAAAATPSTAAAAAAAAEETKSGSNSSGNDGDS
QALPSGRRRRRDHRRQASVSVIMPPLPLLASPPGSSCSSFASPLSMLPPP
TPAGGDDDDAGEEEGTVVFPPAGGVLTPSSASASTAVGRRGGGGGAELSP
FFGGRKKRSGRRESTGGRLESGGGGGGALGDGGWVDKVVADLLQQQDAVK
AEEEEKHEDRGSNNNLAALPEEEPAVDDDTTAGGVKEEEEEEEDGDEGGP
MMVKLTPWTGVMMSAVAIGTGVAIAVVVRSAFSLVFFY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011011Znf_FYVE_PHD
IPR017455Znf_FYVE-rel
IPR013083Znf_RING/FYVE/PHD
IPR000306Znf_FYVE