prot_E-siliculosus-1a_M_contig879.16787.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig879.16787.1
Unique Nameprot_E-siliculosus-1a_M_contig879.16787.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length287
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig879.16787.1 vs. uniprot
Match: A0A6H5KX32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX32_9PHAE)

HSP 1 Score: 342 bits (878), Expect = 2.240e-108
Identity = 234/290 (80.69%), Postives = 246/290 (84.83%), Query Frame = 0 
Query:    1 GNHDFCSKECLGSDKYVMPQDDPDGEMLLNTPSEGVDIFEEATG---GGAGDNERETGGAWGEERAGRDEAGEGSSEESDDEDALHADLVETRGAGVTSEGTLDESSKGGGVAGVPSKGAPKVTLGGCVKSAQTVPSLLKTLEICKELYARKKETFHHAFQQTTQARSDAFDRGSAESGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSPEGFAAFGRLLEAIRLVEDICLEGRRVVEDTLEAVDDEVLALTKIKSKVQRRKQRTPTPSLRLPEEL 287
            GN DF S+ECLGSDKYVMP+DDPDGEMLLNTPSEGVD FEEATG   GGAGDNERE GG  GEERAGRDEAGEGSSEESDD+DALHA LVE+ GAGV  + TLDES +GGGVAGV SKGAPKVTLG CVKSAQTVPSLLKTLE+CK LY RKKETFHHAFQQT QAR+DAFDRG AES A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                RLLEAIRLVE +CLEGR+VV+DTLEAVDD VL LTKIKSKVQR+KQ  PTPSLRLPEEL
Sbjct:  126 GNRDFVSEECLGSDKYVMPRDDPDGEMLLNTPSEGVDFFEEATGAGGGGAGDNEREIGGEQGEERAGRDEAGEGSSEESDDDDALHAGLVESGGAGVKGDVTLDESPQGGGVAGVSSKGAPKVTLGDCVKSAQTVPSLLKTLEVCKVLYVRKKETFHHAFQQTRQARNDAFDRGPAESWASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------RLLEAIRLVETVCLEGRQVVDDTLEAVDDGVLELTKIKSKVQRQKQSIPTPSLRLPEEL 399
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig879.16787.1 vs. uniprot
Match: A0A6H5JYT6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYT6_9PHAE)

HSP 1 Score: 322 bits (825), Expect = 4.470e-104
Identity = 217/273 (79.49%), Postives = 228/273 (83.52%), Query Frame = 0 
Query:   18 MPQDDPDGEMLLNTPSEGVDIFEEATG---GGAGDNERETGGAWGEERAGRDEAGEGSSEESDDEDALHADLVETRGAGVTSEGTLDESSKGGGVAGVPSKGAPKVTLGGCVKSAQTVPSLLKTLEICKELYARKKETFHHAFQQTTQARSDAFDRGSAESGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSPEGFAAFGRLLEAIRLVEDICLEGRRVVEDTLEAVDDEVLALTKIKSKVQRRKQRTPTPSLRLPEEL 287
            MP+DDPDGEMLLNTPSEGVD FEEATG   GGAGDNERE GG  GEERAGRDEAGEGSSEESDD+DALHA LVE+ GAGV  + TLDES +GGGVAGV SKGAPKVTLG CVKSAQTVPSLLKTLE+CK LY RKKETFHHAFQQT QAR+DAFDRG AESGA XXXXXXXXXXXXXXXXXXXXXXXXXXX                   AAFGRLLEAI LVE +CLEGR+VV+DTLEAVDD VL LTKIKSKVQR+KQ  PTPSLRLPEEL
Sbjct:    1 MPRDDPDGEMLLNTPSEGVDFFEEATGAGGGGAGDNEREIGGEQGEERAGRDEAGEGSSEESDDDDALHAGLVESGGAGVKGDVTLDESPQGGGVAGVSSKGAPKVTLGDCVKSAQTVPSLLKTLEVCKVLYVRKKETFHHAFQQTRQARNDAFDRGPAESGASXXXXXXXXXXXXXXXXXXXXXXXXXXXGVS----------------AAFGRLLEAIHLVETVCLEGRQVVDDTLEAVDDGVLELTKIKSKVQRQKQSIPTPSLRLPEEL 257
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig879.16787.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KX32_9PHAE2.240e-10880.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYT6_9PHAE4.470e-10479.49Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig879contigE-siliculosus-1a_M_contig879:802..1794 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig879.16787.1mRNA_E-siliculosus-1a_M_contig879.16787.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig879 800..1794 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig879.16787.1 ID=prot_E-siliculosus-1a_M_contig879.16787.1|Name=mRNA_E-siliculosus-1a_M_contig879.16787.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=287bp
GNHDFCSKECLGSDKYVMPQDDPDGEMLLNTPSEGVDIFEEATGGGAGDN
ERETGGAWGEERAGRDEAGEGSSEESDDEDALHADLVETRGAGVTSEGTL
DESSKGGGVAGVPSKGAPKVTLGGCVKSAQTVPSLLKTLEICKELYARKK
ETFHHAFQQTTQARSDAFDRGSAESGASAAAGASASGGDTTAGGDTPAAG
ASAGAGASAAAGASAGAGDSPEGFAAFGRLLEAIRLVEDICLEGRRVVED
TLEAVDDEVLALTKIKSKVQRRKQRTPTPSLRLPEEL
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