prot_E-siliculosus-1a_M_contig87.16718.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig87.16718.1
Unique Nameprot_E-siliculosus-1a_M_contig87.16718.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length310
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig87.16718.1 vs. uniprot
Match: D7FW69_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW69_ECTSI)

HSP 1 Score: 607 bits (1565), Expect = 2.700e-219
Identity = 305/309 (98.71%), Postives = 307/309 (99.35%), Query Frame = 0 
Query:    1 MKLTVGVASFSLTVVYAFQARPSGIPQGGGRRSTAALASTDGWVALPVNPSAGGRSRTVSFSPSNLEDLQVVEKILQQDQVGEACVLIIPSWRHHPVQYDCLSACLEALKIPTAVQPLPDGLWALLLQRLQVHSLRKAARKGVLEQLIVHALQRPFNHLDLALRLHSDRNTGRRITVIASDDSAWLVRAFVNSRSQQWRKEVPLDTAVLVGGYHKSIVGDLALDVFPNPPPSPPPDGRVVKFFSLNGREGGRVDGDGDVDLEASISCMSFEEDSESCILQEYEVEHSGWLSLLGSTSLLSLWVPRVLRA 309
            MKLTVGVASFSLTVVYAFQARP GIPQGGGRRSTAALASTDGWVALPVNPSAGGRSRTVSFSPSNLEDLQVVEKILQQDQVGEACVLIIPSWRHHPVQYDCLSACLEALKIPTAVQPLPDGLWALLLQRLQVHSLRKAARKGVLEQLIVHAL RPFNHLDLALRLHSDRNTGRRITVIASDDSAWLVRAFVNSRSQQWRKEVPLDTAVLVGGYHKSIVGDLALDVFPNPPPSPPPDGRVVKFFSLNGREGGRVDG+GD+DLEASISCMSFEEDSESCILQEYEVEHSGWLSLLGSTSLLSLWVPRVLRA
Sbjct:    1 MKLTVGVASFSLTVVYAFQARPLGIPQGGGRRSTAALASTDGWVALPVNPSAGGRSRTVSFSPSNLEDLQVVEKILQQDQVGEACVLIIPSWRHHPVQYDCLSACLEALKIPTAVQPLPDGLWALLLQRLQVHSLRKAARKGVLEQLIVHALHRPFNHLDLALRLHSDRNTGRRITVIASDDSAWLVRAFVNSRSQQWRKEVPLDTAVLVGGYHKSIVGDLALDVFPNPPPSPPPDGRVVKFFSLNGREGGRVDGNGDIDLEASISCMSFEEDSESCILQEYEVEHSGWLSLLGSTSLLSLWVPRVLRA 309
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig87.16718.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FW69_ECTSI2.700e-21998.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..309
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.544

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig87contigE-siliculosus-1a_M_contig87:127396..129712 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig87.16718.1mRNA_E-siliculosus-1a_M_contig87.16718.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig87 126960..129712 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig87.16718.1 ID=prot_E-siliculosus-1a_M_contig87.16718.1|Name=mRNA_E-siliculosus-1a_M_contig87.16718.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=310bp
MKLTVGVASFSLTVVYAFQARPSGIPQGGGRRSTAALASTDGWVALPVNP
SAGGRSRTVSFSPSNLEDLQVVEKILQQDQVGEACVLIIPSWRHHPVQYD
CLSACLEALKIPTAVQPLPDGLWALLLQRLQVHSLRKAARKGVLEQLIVH
ALQRPFNHLDLALRLHSDRNTGRRITVIASDDSAWLVRAFVNSRSQQWRK
EVPLDTAVLVGGYHKSIVGDLALDVFPNPPPSPPPDGRVVKFFSLNGREG
GRVDGDGDVDLEASISCMSFEEDSESCILQEYEVEHSGWLSLLGSTSLLS
LWVPRVLRA*
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