prot_E-siliculosus-1a_M_contig87.16716.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig87.16716.1
Unique Nameprot_E-siliculosus-1a_M_contig87.16716.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length433
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig87.16716.1 vs. uniprot
Match: D7FW71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW71_ECTSI)

HSP 1 Score: 707 bits (1826), Expect = 8.140e-254
Identity = 426/432 (98.61%), Postives = 428/432 (99.07%), Query Frame = 0 
Query:    1 MDVNGLGEGVERLNLGDAPEAGALAAAVASAAVGATSSPASASGFSKAVEESSSNQGGPQAPGVAGSVAHDKDNDVEGKLFIGGISWQTTEEGLRHHFGKYGTLADIALMKDKYTGHPRGFGFIKFEDITVLDEILSQEHKIDGKVVDVKRAVPKSEAPGPSSRSSRPAETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDAVVHEIMMGTHEINGKMVEVKRAEPKENRSGRAPRGEFAGGSSPALGGGVAAPFTGTRGRAQPFGAGGRXXXXXXXXXXSFPYNNGGAPFNGNAAASYGQQXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAGAAYSAEGGTTAGSFPVTLPPQAAYGLPDGQAQYTQAEYAAAMRNQQQAQAXXXXXXXXXXXXXXRNTAEGTYGSQPY 432
            MDVNGLGEGVERLNLGDAPEAGALAAAVASAAVGATSSPASASGFSKAVEESSSNQGGPQAPG+AGSVAHDKDNDVEGKLFIGGISWQTTEEGLRHHFGKYGTLADIALMKDKYTGHPRGFGFIKFEDITVLDEILSQEHKIDGKVVDVKRAVPKSEAPGPSSRSSRPAETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDAVVH+IMMGTHEINGKMVEVKRAEPKENRSGRAPRGEFAGGSSPALGGGVAAPFTGTRGRAQPFGAGGRXXXXXXXXXXSFPYNNGGAPFNGNAAASYGQQXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAGAAYSAEGGTTAGSFPVTLPPQAAYGLPDGQAQYTQAEYAAAMRNQQQAQA  XXXXXXXXXXX RN AEGTYGSQPY
Sbjct:   71 MDVNGLGEGVERLNLGDAPEAGALAAAVASAAVGATSSPASASGFSKAVEESSSNQGGPQAPGIAGSVAHDKDNDVEGKLFIGGISWQTTEEGLRHHFGKYGTLADIALMKDKYTGHPRGFGFIKFEDITVLDEILSQEHKIDGKVVDVKRAVPKSEAPGPSSRSSRPAETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDAVVHDIMMGTHEINGKMVEVKRAEPKENRSGRAPRGEFAGGSSPALGGGVAAPFTGTRGRAQPFGAGGRXXXXXXXXXXSFPYNNGGAPFNGNAAASYGQQXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAGAAYSAEGGTTAGSFPVTLPPQAAYGLPDGQAQYTQAEYAAAMRNQQQAQAQVXXXXXXXXXXXARNPAEGTYGSQPY 502
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BLAST of mRNA_E-siliculosus-1a_M_contig87.16716.1 vs. uniprot
Match: A0A6H5JV91_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV91_9PHAE)

HSP 1 Score: 508 bits (1308), Expect = 7.470e-178
Identity = 320/323 (99.07%), Postives = 321/323 (99.38%), Query Frame = 0 
Query:  110 MKDKYTGHPRGFGFIKFEDITVLDEILSQEHKIDGKVVDVKRAVPKSEAPGPSSRSSRPAETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDAVVHEIMMGTHEINGKMVEVKRAEPKENRSGRAPRGEFAGGSSPALGGGVAAPFTGTRGRAQPFGAGGRXXXXXXXXXXSFPYNNGGAPFNGNAAASYGQQXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAGAAYSAEGGTTAGSFPVTLPPQAAYGLPDGQAQYTQAEYAAAMRNQQQAQAXXXXXXXXXXXXXXRNTAEGTYGSQPY 432
            MKDKYTGHPRGFGFIKFED+TVLDEILSQEHKIDGKVVDVKRAVPKSEAPGPSSRSSRPAETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDAVVHEIMMGTHEINGKMVEVKRAEPKENRSGRAPRGEFAGGSSPALGGGVAAPFTGTRGRAQPFGAGGRXXXXXXXXXXSFPYNNGGAPFNGNAAASYGQQXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAGAAYSAEGGTTAGSFPVTLPPQAAYGLPDGQAQYTQAEYAAAMRNQQQAQA XXXXXXXXXXXXXRN AEGTYGSQPY
Sbjct:    1 MKDKYTGHPRGFGFIKFEDVTVLDEILSQEHKIDGKVVDVKRAVPKSEAPGPSSRSSRPAETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDAVVHEIMMGTHEINGKMVEVKRAEPKENRSGRAPRGEFAGGSSPALGGGVAAPFTGTRGRAQPFGAGGRXXXXXXXXXXSFPYNNGGAPFNGNAAASYGQQXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAGAAYSAEGGTTAGSFPVTLPPQAAYGLPDGQAQYTQAEYAAAMRNQQQAQAQXXXXXXXXXXXXXRNPAEGTYGSQPY 323
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BLAST of mRNA_E-siliculosus-1a_M_contig87.16716.1 vs. uniprot
Match: A0A835ZAL5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAL5_9STRA)

HSP 1 Score: 282 bits (721), Expect = 8.380e-89
Identity = 143/200 (71.50%), Postives = 168/200 (84.00%), Query Frame = 0 
Query:   64 VAGSVAHDKDNDVEGKLFIG---GISWQTTEEGLRHHFGKYGTLADIALMKDKYTGHPRGFGFIKFEDITVLDEILSQ-EHKIDGKVVDVKRAVPKSEAPGPSSRSSRPAETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDAVVHEIMMGTHEINGKMVEVKRAEPKENRSGRAPRG 259
            V GS   DKD+DV GKLF+G   GISWQT+EE L +HF K+G LAD+ALMKDKYTG PRGFGFIKFED +VLD +L+Q EH IDG+VVDVKRAVPKSEAPGP+ R++R A+ NK+FVGGLAP+V  AEFR+YFE FG V DAVVMFDRQTQRSRGFGFVTFQ+++VV  ++MGTHE+NGKMVEVK AEPKE+R   +P G
Sbjct:    1 VPGSDEIDKDSDVTGKLFVGKSSGISWQTSEESLSYHFSKFGALADVALMKDKYTGQPRGFGFIKFEDPSVLDAVLAQPEHNIDGRVVDVKRAVPKSEAPGPA-RATRQADFNKVFVGGLAPSVTAAEFRQYFEGFGAVSDAVVMFDRQTQRSRGFGFVTFQDESVVQNVLMGTHELNGKMVEVKTAEPKESRRNASPGG 199
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BLAST of mRNA_E-siliculosus-1a_M_contig87.16716.1 vs. uniprot
Match: A0A836CMD2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMD2_9STRA)

HSP 1 Score: 261 bits (667), Expect = 9.700e-83
Identity = 128/178 (71.91%), Postives = 151/178 (84.83%), Query Frame = 0 
Query:   63 GVAGSVAHDKDNDVEGKLFIGGISWQTTEEGLRHHFGKYGTLADIALMKDKYTGHPRGFGFIKFEDITVLDEILSQ-EHKIDGKVVDVKRAVPKSEAPGPSSRSSRPAETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDAVVHEIMMGTHEINGK 239
            GV+     DKDND+ GK+F+GGISWQT++E L  +F K+G LAD+ALMKDKYTG PRGFGFIKFED  V+D +L+Q EH IDG+ VDVKRAVPKSEAPGPS R++RPA+TNK+FVGGLAP+V +AEFR YFE FG V DAVVMFDRQT RSRGFGFVTFQED+VV  ++MGTHEING+
Sbjct:    8 GVSDEGELDKDNDILGKIFVGGISWQTSDESLSKYFSKFGALADVALMKDKYTGQPRGFGFIKFEDPAVVDVVLTQAEHSIDGRTVDVKRAVPKSEAPGPS-RTARPADTNKVFVGGLAPSVTVAEFRTYFEGFGAVSDAVVMFDRQTLRSRGFGFVTFQEDSVVQNVLMGTHEINGE 184
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BLAST of mRNA_E-siliculosus-1a_M_contig87.16716.1 vs. uniprot
Match: F0WG76_9STRA (Uncharacterized protein AlNc14C88G5606 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WG76_9STRA)

HSP 1 Score: 234 bits (597), Expect = 1.180e-68
Identity = 116/198 (58.59%), Postives = 145/198 (73.23%), Query Frame = 0 
Query:   78 GKLFIGGISWQTTEEGLRHHFGKYGTLADIALMKDKYTGHPRGFGFIKFEDITVLDEILSQEHKIDGKVVDVKRAVPKSE-APGPSSRSSRPA-----------ETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDAVVHEIMMGTHEINGKMVEVKRAEPKENRSGRAPRGEFAG 263
            GKLFIGG+SW+TTEE LR HFGKYG L D ALMKDK++G PRGFGF+ F D+ VLD +L + H IDG+ V+VKRA+P+ + A GPS   S  A           E+ K+FVGGL P+V   +FR+YFE FG + DAVVMFDR+TQRSRGFGFVTF+E+  V E++  THE++GK+VE+KRAEPKE RSG    G + G
Sbjct:  102 GKLFIGGVSWETTEETLRDHFGKYGPLTDAALMKDKFSGQPRGFGFVTFADVAVLDRVLEESHTIDGRTVEVKRAIPRDKTASGPSDVRSSGAHGRGNSGGVITESKKVFVGGLPPSVTEQDFRRYFEEFGRITDAVVMFDRETQRSRGFGFVTFEEEGAVAEVISKTHELHGKVVEIKRAEPKEARSGGGYSGGYGG 299
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BLAST of mRNA_E-siliculosus-1a_M_contig87.16716.1 vs. uniprot
Match: A0A0P1AWA8_PLAHL (Heterogeneous nuclear ribonucleoprotein 1-like isoform x1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWA8_PLAHL)

HSP 1 Score: 223 bits (568), Expect = 1.020e-65
Identity = 111/192 (57.81%), Postives = 138/192 (71.88%), Query Frame = 0 
Query:   78 GKLFIGGISWQTTEEGLRHHFGKYGTLADIALMKDKYTGHPRGFGFIKFEDITVLDEILSQEHKIDGKVVDVKRAVPKSE-APGPSS-RSSRPA-------------ETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDAVVHEIMMGTHEINGKMVEVKRAEPKENRSG 254
            GKLFIGG+SW+TTE+ LR HFGKYG L D ALMKDKYTG PRGFGF+ F D + +D +L + H +DG+ V+VKRA+P+   APG S  R +R               E+ KIFVGGLAPT+   +FR YFE FG + DAVVM DR TQRSRGFGF+TF++++ V E++   HEI+GK VE+KRAEPKE RSG
Sbjct:  127 GKLFIGGVSWETTEDTLRQHFGKYGALTDAALMKDKYTGQPRGFGFVTFADASAIDRVLEETHTLDGRSVEVKRAIPRERTAPGSSEFRGARSGYSSNGXXXXGIFTESKKIFVGGLAPTIAEQDFRHYFEEFGRITDAVVMIDRDTQRSRGFGFITFEDESSVAEVISKNHEIHGKSVEIKRAEPKEARSG 318
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig87.16716.1 vs. uniprot
Match: A0A484E761_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E761_BRELC)

HSP 1 Score: 226 bits (576), Expect = 2.500e-65
Identity = 111/186 (59.68%), Postives = 137/186 (73.66%), Query Frame = 0 
Query:   78 GKLFIGGISWQTTEEGLRHHFGKYGTLADIALMKDKYTGHPRGFGFIKFEDITVLDEILSQEHKIDGKVVDVKRAVPKSE-APGPS--------SRSSRPAETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDAVVHEIMMGTHEINGKMVEVKRAEPKENRSG 254
            GKLFIGG+SW+TTE+ LR HFGKYG L D ALMKDKYTG PRGFGF+ F D   +D +L + H +DG+ V+VKRA+P+   APGPS        + S    E  KIFVGGLAPTV   +FR YFE FG + DAVVM DR TQRSRGFGF+TF++++ V E++  +HEI+GK VE+KRAEPKE R+G
Sbjct:  119 GKLFIGGVSWETTEDTLRQHFGKYGVLTDAALMKDKYTGQPRGFGFVTFADALAIDRVLEETHTLDGRSVEVKRAIPRERTAPGPSDFRGGRGNNSSGGYTEQKKIFVGGLAPTVAEEDFRHYFEEFGKITDAVVMIDRDTQRSRGFGFITFEDESSVVEVISKSHEIHGKTVEIKRAEPKEARAG 304
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig87.16716.1 vs. uniprot
Match: A0A6A3XJL2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3XJL2_9STRA)

HSP 1 Score: 225 bits (573), Expect = 5.420e-65
Identity = 114/201 (56.72%), Postives = 138/201 (68.66%), Query Frame = 0 
Query:   78 GKLFIGGISWQTTEEGLRHHFGKYGTLADIALMKDKYTGHPRGFGFIKFEDITVLDEILSQEHKIDGKVVDVKRAVPKSE-APGPSSRSSRP-----------------------AETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDAVVHEIMMGTHEINGKMVEVKRAEPKENRSG 254
            GKLFIGG+SW+TTEE L  HFGKYG L D ALMKDKYTG PRGFGF+ FED T +D +L + H +DG+ V+VKRA+P+ + APG  S   R                         E  KIFVGGLAPTV   +FR+YFE FG + DAVVM DR TQRSRGFGF+TF+E++ V E++  +HEI+GK VE+KRAEPKE RSG
Sbjct:  124 GKLFIGGVSWETTEETLTQHFGKYGVLTDAALMKDKYTGQPRGFGFVTFEDATAIDRVLEETHMLDGRSVEVKRAIPREKTAPGGGSSDFRGXXXXXXXXXXXXXXXXXXXXXXFTEQKKIFVGGLAPTVAERDFRQYFEEFGKITDAVVMIDRDTQRSRGFGFITFEEESSVAEVLSKSHEIHGKTVEIKRAEPKEARSG 324
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig87.16716.1 vs. uniprot
Match: A0A3M6VT05_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VT05_9STRA)

HSP 1 Score: 224 bits (571), Expect = 1.500e-64
Identity = 111/187 (59.36%), Postives = 136/187 (72.73%), Query Frame = 0 
Query:   78 GKLFIGGISWQTTEEGLRHHFGKYGTLADIALMKDKYTGHPRGFGFIKFEDITVLDEILSQEHKIDGKVVDVKRAVPKSE-APGPSS---------RSSRPAETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDAVVHEIMMGTHEINGKMVEVKRAEPKENRSG 254
            GKLFIGG+SW+TTE+ LR HFGKYG L D ALMKDKYTG PRGFGF+ F D + +D +L + H +DG+ V+VKRA+P+   APG S           S    E  KIFVGGLAPTV   +FR YFE FG   DAVVM DR TQRSRGFGF+TF+E++ V E++  +HEI+GK+VE+KRAEPKE+R G
Sbjct:  115 GKLFIGGVSWETTEDTLRQHFGKYGPLTDAALMKDKYTGQPRGFGFVTFADASAIDRVLEETHTLDGRSVEVKRAIPRERTAPGSSEIRGGGRGGFSSGGFTEQKKIFVGGLAPTVTEQDFRHYFEEFGKTTDAVVMIDRDTQRSRGFGFITFEEESSVAEVISKSHEIHGKIVEIKRAEPKESRGG 301
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig87.16716.1 vs. uniprot
Match: A0A6A3TQ19_9STRA (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TQ19_9STRA)

HSP 1 Score: 225 bits (573), Expect = 1.640e-64
Identity = 114/201 (56.72%), Postives = 138/201 (68.66%), Query Frame = 0 
Query:   78 GKLFIGGISWQTTEEGLRHHFGKYGTLADIALMKDKYTGHPRGFGFIKFEDITVLDEILSQEHKIDGKVVDVKRAVPKSE-APGPSSRSSRP-----------------------AETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDAVVHEIMMGTHEINGKMVEVKRAEPKENRSG 254
            GKLFIGG+SW+TTEE L  HFGKYG L D ALMKDKYTG PRGFGF+ FED T +D +L + H +DG+ V+VKRA+P+ + APG  S   R                         E  KIFVGGLAPTV   +FR+YFE FG + DAVVM DR TQRSRGFGF+TF+E++ V E++  +HEI+GK VE+KRAEPKE RSG
Sbjct:  124 GKLFIGGVSWETTEETLTQHFGKYGVLTDAALMKDKYTGQPRGFGFVTFEDATAIDRVLEETHMLDGRSVEVKRAIPREKTAPGGGSSDFRGXXXXXXXXXXXXXXXXXXXXXXFTEQKKIFVGGLAPTVAERDFRQYFEEFGKITDAVVMIDRDTQRSRGFGFITFEEESSVAEVLSKSHEIHGKTVEIKRAEPKEARSG 324
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig87.16716.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW71_ECTSI8.140e-25498.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JV91_9PHAE7.470e-17899.07RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZAL5_9STRA8.380e-8971.50Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A836CMD2_9STRA9.700e-8371.91Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
F0WG76_9STRA1.180e-6858.59Uncharacterized protein AlNc14C88G5606 n=1 Tax=Alb... [more]
A0A0P1AWA8_PLAHL1.020e-6557.81Heterogeneous nuclear ribonucleoprotein 1-like iso... [more]
A0A484E761_BRELC2.500e-6559.68Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A6A3XJL2_9STRA5.420e-6556.72Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]
A0A3M6VT05_9STRA1.500e-6459.36Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A6A3TQ19_9STRA1.640e-6456.72Uncharacterized protein n=7 Tax=Phytophthora TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 79..150
e-value: 2.0E-19
score: 80.6
coord: 173..244
e-value: 8.2E-17
score: 71.9
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 80..146
e-value: 1.5E-12
score: 47.1
coord: 174..223
e-value: 2.9E-11
score: 43.0
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 78..154
score: 15.988
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 172..248
score: 15.801
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 67..157
e-value: 1.8E-23
score: 84.6
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 158..264
e-value: 1.7E-22
score: 81.8
IPR037366BOULE/DAZ familyPANTHERPTHR11176BOULE-RELATEDcoord: 71..167
IPR037366BOULE/DAZ familyPANTHERPTHR11176BOULE-RELATEDcoord: 160..421
NoneNo IPR availablePANTHERPTHR11176:SF13GENE 17190-RELATEDcoord: 160..421
NoneNo IPR availablePANTHERPTHR11176:SF13GENE 17190-RELATEDcoord: 71..167
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 71..166
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 161..263

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig87contigE-siliculosus-1a_M_contig87:108810..112391 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig87.16716.1mRNA_E-siliculosus-1a_M_contig87.16716.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig87 108176..112456 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig87.16716.1 ID=prot_E-siliculosus-1a_M_contig87.16716.1|Name=mRNA_E-siliculosus-1a_M_contig87.16716.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=433bp
MDVNGLGEGVERLNLGDAPEAGALAAAVASAAVGATSSPASASGFSKAVE
ESSSNQGGPQAPGVAGSVAHDKDNDVEGKLFIGGISWQTTEEGLRHHFGK
YGTLADIALMKDKYTGHPRGFGFIKFEDITVLDEILSQEHKIDGKVVDVK
RAVPKSEAPGPSSRSSRPAETNKIFVGGLAPTVMMAEFRKYFETFGGVVD
AVVMFDRQTQRSRGFGFVTFQEDAVVHEIMMGTHEINGKMVEVKRAEPKE
NRSGRAPRGEFAGGSSPALGGGVAAPFTGTRGRAQPFGAGGRGAGAGYGG
GGSFPYNNGGAPFNGNAAASYGQQPAYGYAAAGYGYNGQMYSAPTPYGYN
GRGAGAAYSAEGGTTAGSFPVTLPPQAAYGLPDGQAQYTQAEYAAAMRNQ
QQAQAQAQQHAQVQAQQQARNTAEGTYGSQPY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035979RBD_domain_sf
IPR037366BOULE/DAZ
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom