prot_E-siliculosus-1a_M_contig86.16700.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig86.16700.1
Unique Nameprot_E-siliculosus-1a_M_contig86.16700.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length1018
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig86.16700.1 vs. uniprot
Match: D8LLE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE9_ECTSI)

HSP 1 Score: 791 bits (2043), Expect = 1.480e-277
Identity = 433/506 (85.57%), Postives = 449/506 (88.74%), Query Frame = 0
Query:  512 MLVSKQACESKPVGYEIDLADGNGYWDLLGGNRGRGHGGDDGVLAGELAESAVASVVLLRWAMECIVANDGEGGAEDGDGFVPVTTAPREGLTTEGDDDPAKARVAEDRTPSMQGEAVSATATGQVRLATSTRKPRDSDRFSFSGSLEKKWASHHGEGDCRGPKKAIGNKSFAATCPSLSESSCNRERLRGKKPLSRELPFAGGGRXXXXXXXXXXXXXXXWKGEGQQPSEGDRGRPAGGIVATSPSPGDETKKDARRREGWRDGRTPQVAGKSTASGDEPVEDIRSVPKRWLAPAAHEVALHALVCLLRAAEVDLCGHSSTNRLQTQLDMDTVGGGRAVAMEEGVLLLVLKACAKFQDHGDVVKICCMLMRVGVMCALHGEGFERPVGGPIAPDMSLLVDNDVEGVVTRAAKAHVDNLSVATEASALLRSIGMEFIRIDASGATCSALPPAPPTPPPAGKSDLGPVAVVVTVDAVTKASTTALDVGVVPNPTAGRASSIIGRAEG 1017
            ML SK A ESKP GYEIDLADGNGYWDLLGGNRGRGHGGDDGVLAGELAESAVASVVLLRWAMEC+VANDGEGGAEDGDG VPVTTAPR+GLT + D DPAKA VAEDRTP MQGEAVSATA GQVRLA STRKPRDSDRFSFSGSLE K ASH GEGDCRGP+  IGNKSFAATCPSLSESSCNRERLR KKPL R LP +GGGRXXXXXXXXXXXXX  WKGE QQP EGDRGRPA GIVATS SPGDE KKDARRREGWRD R                  +R+VPKRWLAPAAHEVALH LVCLLRAAEVDLCGH+ T+RLQT+LD+DTVGGGRAV MEEGVLLL+LKACAKFQDHGDVVKICCMLMRVGVMCALHGEGFERPVGGPIAPDMSLL+DNDVEGVVTRAAKAHVDNLSVA EASALL S+GM+ IRIDASGATCSALPPAPPTPPPAGKS LGP AVVVTVDAVTK  TTALD+GVVPNPTAGRASSIIGRAEG
Sbjct:    1 MLASKPAFESKPAGYEIDLADGNGYWDLLGGNRGRGHGGDDGVLAGELAESAVASVVLLRWAMECVVANDGEGGAEDGDGVVPVTTAPRDGLTAD-DGDPAKAPVAEDRTPGMQGEAVSATAKGQVRLAKSTRKPRDSDRFSFSGSLETKLASHQGEGDCRGPRNVIGNKSFAATCPSLSESSCNRERLRDKKPLPRGLPLSGGGRXXXXXXXXXXXXX--WKGEEQQPPEGDRGRPADGIVATSSSPGDEPKKDARRREGWRDARXXXXXXXXXXXXXXXXXXMRTVPKRWLAPAAHEVALHTLVCLLRAAEVDLCGHNGTHRLQTELDVDTVGGGRAVVMEEGVLLLILKACAKFQDHGDVVKICCMLMRVGVMCALHGEGFERPVGGPIAPDMSLLIDNDVEGVVTRAAKAHVDNLSVAAEASALLHSLGMDSIRIDASGATCSALPPAPPTPPPAGKSALGPAAVVVTVDAVTK--TTALDLGVVPNPTAGRASSIIGRAEG 501          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16700.1 vs. uniprot
Match: A0A6H5KV03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV03_9PHAE)

HSP 1 Score: 726 bits (1874), Expect = 4.850e-251
Identity = 418/554 (75.45%), Postives = 433/554 (78.16%), Query Frame = 0
Query:  512 MLVSKQACESKPVGYEIDLADGNGYWDLLGGNRGRGHGGDDGVLAGELAESAVASVVLLRWAMECIVANDGEGGAEDGDGFVPVTTAPREGLTTEGDDDPAKARVAEDRTPSMQGEAVSATATGQVRLATSTRKPRDSDRFSFSGSLEKKWASHHGEGDCRGPKKAIGNKSFAATCPSLSESSCNRERLRGKKPLSRELPFAGGGRXXXXXXXXXXXXXXXWKGEGQQPSEGDRGRPAGGIVATSPSPGDETKKDARRREGWRDGRTPQVAGKSTASGDEPVEDIRSVPKR--------------------------------------------------------------------------WLAPAAHEVALHALVCLLRAAEVDLCGHSSTNRLQTQLDMDTVGGGRAVAMEEGVLLLVLKACAKFQDHGDVVKICCMLMRVGVMCALHGEGFERPVGGPIAPDMSLLVDNDVEGVVTRAAKAHVDNLSVATEASALLRSIGMEFIRIDASGATCSALPPAPPTPPPAGKSDLGPVAVVVTVDAVTKAS 991
            MLVSKQACESK VGYE DLADGNGYWDLLG N  RGHG DDGVLAGELAESAVASVVLLRWAMECIVANDGEGGAEDGDG VP TTAPR GLTT  DD+PAKA VAED TPSMQG+AVSATATGQVRLA S RKPR SDRFSFSGSLE+K A+HHGEGDCRGP+KAIGNKSFAA+CPSLSESSCNRERLR KKP  RELP +GG RXXXXXXXXXXXXXXX       P EGDRGRPAGGIV TSPSPGDE KKD R REGWRDGRTP+VAGKSTASGDEPVED+R+ PKR                                                                          WLAPAAHEVALHALVCLLRAAEVDLCGHSSTNRLQT+LDMDTVGGGRAV MEEGVLLLVLKACA+FQDHGDVVKICCMLMRVGVMCALHG GFERPVGGPIAP M+LLVDN VEGVVTRAAKAHV+NLSV  EASALL S+GM  IRIDASGATCSALPPAPPTP PAGKSDL P AVVVTVDAVTKAS
Sbjct:    1 MLVSKQACESKSVGYEKDLADGNGYWDLLGENCCRGHGLDDGVLAGELAESAVASVVLLRWAMECIVANDGEGGAEDGDGVVPGTTAPRNGLTTADDDEPAKAPVAEDGTPSMQGKAVSATATGQVRLAHSARKPRGSDRFSFSGSLERKCANHHGEGDCRGPRKAIGNKSFAASCPSLSESSCNRERLRDKKPFPRELPLSGG-RXXXXXXXXXXXXXXXXXXXXXXP-EGDRGRPAGGIVVTSPSPGDEAKKDERHREGWRDGRTPRVAGKSTASGDEPVEDMRTFPKRYAAAPKMYCFWLVGAPSLLSAPWNDLHNPGSPQRRSTSRNVIFEERRMGLFKSVSSGLNPSCLPASLLSSADRTWLAPAAHEVALHALVCLLRAAEVDLCGHSSTNRLQTELDMDTVGGGRAVVMEEGVLLLVLKACARFQDHGDVVKICCMLMRVGVMCALHGAGFERPVGGPIAPGMALLVDNGVEGVVTRAAKAHVENLSVTMEASALLHSLGMNSIRIDASGATCSALPPAPPTPQPAGKSDLEPAAVVVTVDAVTKAS 552          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig86.16700.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLE9_ECTSI1.480e-27785.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KV03_9PHAE4.850e-25175.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 145..182
NoneNo IPR availableCOILSCoilCoilcoord: 39..73
NoneNo IPR availableCOILSCoilCoilcoord: 100..120
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 373..1017
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 348..372
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..347

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig86contigE-siliculosus-1a_M_contig86:680287..688307 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig86.16700.1mRNA_E-siliculosus-1a_M_contig86.16700.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig86 680287..688307 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig86.16700.1 ID=prot_E-siliculosus-1a_M_contig86.16700.1|Name=mRNA_E-siliculosus-1a_M_contig86.16700.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1018bp
MARKRKKKGKRKPKPKLTTITDVVAKAVTSRKLMRLWNEALLNDEVKDLR
QRLVKAENDREALRRRAAEREDQQEAVFDTLKERVVIAQSEIQTIVRRTR
ENDERRRREHDDTQRNLQERIDEIYLQRLATASLKADLRDKDKTLDRFTL
ELQQAVIKNEELEREQKRLKHIEQMLDTFRRNFVVLGRTEAGEEIRHAVA
NAHGIQAGERGETGSIDVMGEPRRLHPTGDVPGLGLVPLLIEGMAQFPGD
VKLTRDALALLGYIASLEQLGRTFLTTHRLYRQVVAALQRHVIDGVVALY
AARLLHKSALQGEATALDLRKAGVIPLLAEALATASFGPSGARKPRRLLY
HALATIRLCYPSGFFCESLVALRLQHRRQPNPSHSGNKALPSPTRTVAAT
AATTAAITTAQCDDVQTVRDRTISRSKGGRGGGGSDGRGSIRAEGGGEAT
RSKNASSTLLFRSPPPLHRYSLGVNACTRASQLRPLPAAARENACRRPGK
LSFAKRSQAGPMLVSKQACESKPVGYEIDLADGNGYWDLLGGNRGRGHGG
DDGVLAGELAESAVASVVLLRWAMECIVANDGEGGAEDGDGFVPVTTAPR
EGLTTEGDDDPAKARVAEDRTPSMQGEAVSATATGQVRLATSTRKPRDSD
RFSFSGSLEKKWASHHGEGDCRGPKKAIGNKSFAATCPSLSESSCNRERL
RGKKPLSRELPFAGGGRGEGGGGGGGGGGGGGWKGEGQQPSEGDRGRPAG
GIVATSPSPGDETKKDARRREGWRDGRTPQVAGKSTASGDEPVEDIRSVP
KRWLAPAAHEVALHALVCLLRAAEVDLCGHSSTNRLQTQLDMDTVGGGRA
VAMEEGVLLLVLKACAKFQDHGDVVKICCMLMRVGVMCALHGEGFERPVG
GPIAPDMSLLVDNDVEGVVTRAAKAHVDNLSVATEASALLRSIGMEFIRI
DASGATCSALPPAPPTPPPAGKSDLGPVAVVVTVDAVTKASTTALDVGVV
PNPTAGRASSIIGRAEG*
back to top