prot_E-siliculosus-1a_M_contig86.16683.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig86.16683.1
Unique Nameprot_E-siliculosus-1a_M_contig86.16683.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length88
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig86.16683.1 vs. uniprot
Match: D8LBV3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBV3_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 1.140e-18
Identity = 55/77 (71.43%), Postives = 56/77 (72.73%), Query Frame = 0 
Query:    1 MDRAPIVFFMFLQSESLGRVEGWSL---GAF-PLSYLKPPSPLYTVFSFRRREEGSFISVGRVLSVSVKKTQRSRLT 73
            MD AP VF MFL    L RV  W+L   G F P  YLKPPSPL TVFSFRRREEGSFISV RVLSVS K TQRSRLT
Sbjct:    1 MDGAPTVF-MFL----LFRVSPWALWRGGDFEPFPYLKPPSPLCTVFSFRRREEGSFISVRRVLSVSAK-TQRSRLT 71
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig86.16683.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBV3_ECTSI1.140e-1871.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig86contigE-siliculosus-1a_M_contig86:554379..554642 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig86.16683.1mRNA_E-siliculosus-1a_M_contig86.16683.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig86 554039..557513 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig86.16683.1 ID=prot_E-siliculosus-1a_M_contig86.16683.1|Name=mRNA_E-siliculosus-1a_M_contig86.16683.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=88bp
MDRAPIVFFMFLQSESLGRVEGWSLGAFPLSYLKPPSPLYTVFSFRRREE
GSFISVGRVLSVSVKKTQRSRLTYPFCCCCCAGNLRS*
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