prot_E-siliculosus-1a_M_contig86.16678.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig86.16678.1
Unique Nameprot_E-siliculosus-1a_M_contig86.16678.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length309
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig86.16678.1 vs. uniprot
Match: D8LBV1_ECTSI (G-patch domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBV1_ECTSI)

HSP 1 Score: 404 bits (1037), Expect = 9.370e-139
Identity = 275/300 (91.67%), Postives = 279/300 (93.00%), Query Frame = 0
Query:   16 LGSDAYMFGDWEQHTKGFGSRMMNRMGYRRGEGLGKEKQGISRPVPIRVLPERRTLDHLRVDDVGGGKTARSVGGDGKXXXXXXXXXXXXXXXXXXXXXXX-----MFNFLNKTMHASMSKRIAEGGGAAAAASPLPGRRIRPLFDAGGASYSS--ASSTSLPTATTATGAGTAHPLRKSGVFSDKKRGGXXXXXXXXXXXXXXSRMSQAELRSHLVGAREAEATLAAKIGRLKETISRNEELDPKTAAQARQKLKQVCQQAKEVRDSRGRAERALENRGGGGGKXXXXXXXXKAGLFSF 308
            L SDAYMFGDWEQHTKGFGSRMMNRMGYRRGEGLGKEKQGISRPVPIRVLPERRTLDHLRVDDVGGGKTARSVGGDGKXXXXXXXXXXXXXXXXXXXXXXX     MFNFLNKTMHASMSKR AEG      ASPLPG+RIRPLFDAGGASYSS  A+STS+PTATTA GAGTAH LRKSGVF DKKR G XXXXXXXXXXXXX RMSQAELRSHLVGAREAEATLAAKIGRLKETISRNEELDP+TAAQARQKLKQVCQQAKEVRDSRGRAERALENRGGGGGKXXXXXXXXKAGLFSF
Sbjct:   20 LVSDAYMFGDWEQHTKGFGSRMMNRMGYRRGEGLGKEKQGISRPVPIRVLPERRTLDHLRVDDVGGGKTARSVGGDGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFNFLNKTMHASMSKRKAEGXXXXXXASPLPGQRIRPLFDAGGASYSSSAATSTSIPTATTAAGAGTAHALRKSGVFPDKKRDGGXXXXXXXXXXXXXXRMSQAELRSHLVGAREAEATLAAKIGRLKETISRNEELDPRTAAQARQKLKQVCQQAKEVRDSRGRAERALENRGGGGGKXXXXXXXXKAGLFSF 319          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16678.1 vs. uniprot
Match: A0A6H5KPC0_9PHAE (Zinc finger CCCH-type with G patch domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPC0_9PHAE)

HSP 1 Score: 353 bits (905), Expect = 1.950e-114
Identity = 238/296 (80.41%), Postives = 244/296 (82.43%), Query Frame = 0
Query:    1 AAGSGDAGXXXXXXXLGSDAYMFGDWEQHTKGFGSRMMNRMGYRRGEGLGKEKQGISRPVPIRVLPERRTLDHLRVDDVGGGKTARSVGGDGKXXXXXXXXXXXXXXXXXXXXXXX-----MFNFLNKTMHASMSKRIAEGGGAAAAASPLPGRRIRPLFDAGGASY---SSASSTSLPTATTATGAGTAHPLRKSGVFSDKKRGGXXXXXXXXXXXXXXSRMSQAELRSHLVGAREAEATLAAKIGRLKETISRNEELDPKTAAQARQKLKQVCQQAKEVRDSRGRAERALENRG 288
            AAGSGD  XXXXXXXLGSDAYMFGDWEQHTKGFGSRMMNRMGYRRGEGLGKEKQGISRPVPIRVLPERRTLDHLRVDDVGGGK+ARSVGGDG XXXXXXXXXXXXXXXXXXXXXXX     MFNFLNKTMHASM K                    R LFDAGG SY   +S+SSTS+PTATTATGAGTAHPLRKSGV SD  R G              +RMSQAELRSHLVGAREAEATLAAKIGRLKETISRNEELDP+TAAQARQKLKQVCQQAKEVRDSRGRAERALENRG
Sbjct:  340 AAGSGDXXXXXXXXXLGSDAYMFGDWEQHTKGFGSRMMNRMGYRRGEGLGKEKQGISRPVPIRVLPERRTLDHLRVDDVGGGKSARSVGGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFNFLNKTMHASMRKXXXXXXXXXXXXXXXXXXXXRLLFDAGGDSYPSCASSSSTSIPTATTATGAGTAHPLRKSGVLSDTNRDGGGAGVGRAGVGGAAARMSQAELRSHLVGAREAEATLAAKIGRLKETISRNEELDPRTAAQARQKLKQVCQQAKEVRDSRGRAERALENRG 635          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16678.1 vs. uniprot
Match: A0A4P9VUV8_9FUNG (G-patch domain-containing protein (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9VUV8_9FUNG)

HSP 1 Score: 72.8 bits (177), Expect = 8.190e-11
Identity = 33/57 (57.89%), Postives = 40/57 (70.18%), Query Frame = 0
Query:   17 GSDAYMFGDWEQHTKGFGSRMMNRMGYRRGEGLGKEKQGISRPVPIRVLPERRTLDH 73
            GSD   FGDWE HTKG GSR+M +MGYR G GLG+  +GI RPV +R+L   + L H
Sbjct:  145 GSDGTPFGDWEAHTKGIGSRLMLKMGYRMGSGLGRHAEGIVRPVEVRILSSGKGLGH 201          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16678.1 vs. uniprot
Match: A0A0D9VM24_9ORYZ (G-patch domain-containing protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9VM24_9ORYZ)

HSP 1 Score: 72.8 bits (177), Expect = 1.190e-10
Identity = 39/81 (48.15%), Postives = 50/81 (61.73%), Query Frame = 0
Query:   18 SDAYMFGDWEQHTKGFGSRMMNRMGYRRGEGLGKEKQGISRPVPIRVLPERRTLDHLRV-----DDVGGGKTARSVGGDGK 93
            SD  +F  WE HT+G  S+MM +MGYR G GLG   QG+  P+P++VLP +++LDH        D VG GK  RS GG  K
Sbjct:  288 SDTVIFAKWENHTRGVASKMMAKMGYREGMGLGVSGQGMVDPIPVKVLPPKQSLDHAVAASEVNDSVGSGKK-RSRGGKRK 367          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16678.1 vs. uniprot
Match: UPI001F5D34AA (zinc finger CCCH domain-containing protein 18-like n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5D34AA)

HSP 1 Score: 70.9 bits (172), Expect = 5.250e-10
Identity = 34/71 (47.89%), Postives = 46/71 (64.79%), Query Frame = 0
Query:   18 SDAYMFGDWEQHTKGFGSRMMNRMGYRRGEGLGKEKQGISRPVPIRVLPERRTLDHLRVDDVG--GGKTAR 86
            S+  +F  WEQHT+G  S+MM +MGYR G GLG   QG+  P+P++VLP +++LDH      G  GG  AR
Sbjct:  291 SETLIFAKWEQHTRGIASKMMAKMGYREGMGLGIYGQGMVDPIPVKVLPPKQSLDHALAPTAGEDGGSKAR 361          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16678.1 vs. uniprot
Match: A0A3L6ETS4_MAIZE (Zinc finger CCCH domain-containing protein 18 n=1 Tax=Zea mays TaxID=4577 RepID=A0A3L6ETS4_MAIZE)

HSP 1 Score: 70.1 bits (170), Expect = 5.260e-10
Identity = 37/79 (46.84%), Postives = 49/79 (62.03%), Query Frame = 0
Query:   18 SDAYMFGDWEQHTKGFGSRMMNRMGYRRGEGLGKEKQGISRPVPIRVLPERRTLDHLRVD---DVGGGKTARSVGGDGK 93
            +D  +F  WE HT+G  S+MM +MGYR G GLG   QG+  P+P++VLP +++LDH       D G GK  RS GG  K
Sbjct:  118 TDTMIFAKWEHHTRGVASKMMAKMGYREGMGLGVSGQGMLDPIPVKVLPPKQSLDHALASSEADGGSGKK-RSRGGKRK 195          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16678.1 vs. uniprot
Match: I1IDD7_BRADI (Uncharacterized protein n=3 Tax=Brachypodium distachyon TaxID=15368 RepID=I1IDD7_BRADI)

HSP 1 Score: 70.5 bits (171), Expect = 7.050e-10
Identity = 30/56 (53.57%), Postives = 41/56 (73.21%), Query Frame = 0
Query:   18 SDAYMFGDWEQHTKGFGSRMMNRMGYRRGEGLGKEKQGISRPVPIRVLPERRTLDH 73
            S+  +F  WEQHT+G  S+MM RMGYR G GLG   QG+  P+P++VLP +++LDH
Sbjct:  294 SETVIFAKWEQHTRGVASKMMARMGYREGMGLGVSGQGMVDPIPVKVLPPKQSLDH 349          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16678.1 vs. uniprot
Match: J3LHX4_ORYBR (G-patch domain-containing protein n=1 Tax=Oryza brachyantha TaxID=4533 RepID=J3LHX4_ORYBR)

HSP 1 Score: 69.3 bits (168), Expect = 8.900e-10
Identity = 37/81 (45.68%), Postives = 50/81 (61.73%), Query Frame = 0
Query:   18 SDAYMFGDWEQHTKGFGSRMMNRMGYRRGEGLGKEKQGISRPVPIRVLPERRTLDHLRV-----DDVGGGKTARSVGGDGK 93
            ++  +F  WE HT+G  S+MM +MGYR G GLG   QG+  P+P++VLP +++LDH        D VG GK  RS GG  K
Sbjct:  102 TETAIFAKWEHHTRGVASKMMAKMGYREGMGLGASGQGMLDPIPVKVLPPKQSLDHAVAASEVNDSVGPGKK-RSRGGKRK 181          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16678.1 vs. uniprot
Match: B4FAY0_MAIZE (Zinc finger CCCH domain-containing protein 22 n=7 Tax=Andropogoneae TaxID=147429 RepID=B4FAY0_MAIZE)

HSP 1 Score: 70.1 bits (170), Expect = 9.340e-10
Identity = 37/79 (46.84%), Postives = 49/79 (62.03%), Query Frame = 0
Query:   18 SDAYMFGDWEQHTKGFGSRMMNRMGYRRGEGLGKEKQGISRPVPIRVLPERRTLDHLRVD---DVGGGKTARSVGGDGK 93
            +D  +F  WE HT+G  S+MM +MGYR G GLG   QG+  P+P++VLP +++LDH       D G GK  RS GG  K
Sbjct:  292 TDTMIFAKWEHHTRGVASKMMAKMGYREGMGLGVSGQGMLDPIPVKVLPPKQSLDHALASSEADGGSGKK-RSRGGKRK 369          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16678.1 vs. uniprot
Match: A0A3L6RNK1_PANMI (Zinc finger CCCH domain-containing protein 18 n=1 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6RNK1_PANMI)

HSP 1 Score: 69.7 bits (169), Expect = 1.210e-9
Identity = 35/80 (43.75%), Postives = 47/80 (58.75%), Query Frame = 0
Query:   18 SDAYMFGDWEQHTKGFGSRMMNRMGYRRGEGLGKEKQGISRPVPIRVLPERRTLDHLRVDDVGGGKTA----RSVGGDGK 93
            +D  +F  WE HT+G  S+MM +MGYR G GLG   QG+  P+P++VLP +++LDH       GG       RS GG  K
Sbjct:  293 TDTVIFAKWEHHTRGVASKMMAKMGYREGMGLGVSGQGMLDPIPVKVLPPKQSLDHALAASEAGGSIGSGKKRSRGGKRK 372          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig86.16678.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBV1_ECTSI9.370e-13991.67G-patch domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KPC0_9PHAE1.950e-11480.41Zinc finger CCCH-type with G patch domain-containi... [more]
A0A4P9VUV8_9FUNG8.190e-1157.89G-patch domain-containing protein (Fragment) n=1 T... [more]
A0A0D9VM24_9ORYZ1.190e-1048.15G-patch domain-containing protein n=1 Tax=Leersia ... [more]
UPI001F5D34AA5.250e-1047.89zinc finger CCCH domain-containing protein 18-like... [more]
A0A3L6ETS4_MAIZE5.260e-1046.84Zinc finger CCCH domain-containing protein 18 n=1 ... [more]
I1IDD7_BRADI7.050e-1053.57Uncharacterized protein n=3 Tax=Brachypodium dista... [more]
J3LHX4_ORYBR8.900e-1045.68G-patch domain-containing protein n=1 Tax=Oryza br... [more]
B4FAY0_MAIZE9.340e-1046.84Zinc finger CCCH domain-containing protein 22 n=7 ... [more]
A0A3L6RNK1_PANMI1.210e-943.75Zinc finger CCCH domain-containing protein 18 n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 256..276
NoneNo IPR availablePANTHERPTHR46297FAMILY NOT NAMEDcoord: 22..287
IPR000467G-patch domainSMARTSM00443G-patch_5coord: 28..74
e-value: 1.1E-9
score: 48.1
IPR000467G-patch domainPFAMPF01585G-patchcoord: 30..70
e-value: 2.9E-12
score: 46.3
IPR000467G-patch domainPROSITEPS50174G_PATCHcoord: 30..76
score: 13.16

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig86contigE-siliculosus-1a_M_contig86:534988..537578 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig86.16678.1mRNA_E-siliculosus-1a_M_contig86.16678.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig86 534988..537578 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig86.16678.1 ID=prot_E-siliculosus-1a_M_contig86.16678.1|Name=mRNA_E-siliculosus-1a_M_contig86.16678.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=309bp
AAGSGDAGGGGGGGGLGSDAYMFGDWEQHTKGFGSRMMNRMGYRRGEGLG
KEKQGISRPVPIRVLPERRTLDHLRVDDVGGGKTARSVGGDGKKKNKKKK
DNNNTKPGGSGGGGGGMFNFLNKTMHASMSKRIAEGGGAAAAASPLPGRR
IRPLFDAGGASYSSASSTSLPTATTATGAGTAHPLRKSGVFSDKKRGGGG
AGAAEAAAAAAASRMSQAELRSHLVGAREAEATLAAKIGRLKETISRNEE
LDPKTAAQARQKLKQVCQQAKEVRDSRGRAERALENRGGGGGKGGGRKGG
GKAGLFSF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000467G_patch_dom