prot_E-siliculosus-1a_M_contig86.16653.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig86.16653.1
Unique Nameprot_E-siliculosus-1a_M_contig86.16653.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length409
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig86.16653.1 vs. uniprot
Match: D8LBT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBT1_ECTSI)

HSP 1 Score: 566 bits (1460), Expect = 3.250e-200
Identity = 362/401 (90.27%), Postives = 368/401 (91.77%), Query Frame = 0 
Query:   12 MQVYLTSWQAMCRASAAIAKGLAKLARGSDGAVGARGDNDGVKDKQGVSPLVDMARLYDSAHRAIDRGVREPTQRQVPFRHRADTTLRETGALLSRFPPIFAKVTRRKQVLADVEAAKSRVRAAEAAREKERDSFAVVAGKEHRRRMSDALATAVAVAEGVTAEVVADAERLEREREAMLVPQVSALVGGQAFFMRRSATVLEKLAAQLPHSALALCRLLGPRPMENPSPPPPLPRR-SSIQQTLSPSVAPVDVSGHSAGSSSTVVRGFDGXXXXXXXXXXXXMGLVSPNQQAATT-TPVFSPPGLRPHGAKFEPVGLSPTGSSASXXXXXXAAVGAPDRSQSCSRPNAMARGDPASTSKSAEAMNPAAAXXXXXXXXXXXX--PPRPEINSGRAGGDGTR 408
            MQVYLTSWQAMCRASAAIAKGLAKLA+GSDGAVGARGDNDGVKDKQGVSPLVDMARLYDSAHRAIDRGVREPTQR V      DTTLRETGALLSRFPPIFAKVTRRKQVLADVEAAKSRVRAAEAAREKERDSFAVVAGKEHRRRMSDALATAVAVAEGVTAEVVADAERLEREREAMLVPQVSALVGGQAFFMRRSA VLEKLA+QLPHSALALC+LLGPRPMEN S PPPLPRR SSIQQTLSPSVAPVDVSGHSAGSSSTVVRGFDGXXXXXXXXXXXX              TP  SPPGL+PHGAKFEPVGLSPTGSSASXXXXXXAAVG PDRSQSCSRP+AMARGDP STSKSAEAMNPAAAXXXXXXXXXXXX  PPRPEI+ GRAGGDG R
Sbjct:    1 MQVYLTSWQAMCRASAAIAKGLAKLAKGSDGAVGARGDNDGVKDKQGVSPLVDMARLYDSAHRAIDRGVREPTQRVVE-----DTTLRETGALLSRFPPIFAKVTRRKQVLADVEAAKSRVRAAEAAREKERDSFAVVAGKEHRRRMSDALATAVAVAEGVTAEVVADAERLEREREAMLVPQVSALVGGQAFFMRRSAVVLEKLASQLPHSALALCQLLGPRPMENRSAPPPLPRRRSSIQQTLSPSVAPVDVSGHSAGSSSTVVRGFDGXXXXXXXXXXXXXXXXXXXXXXXXXXTPALSPPGLQPHGAKFEPVGLSPTGSSASXXXXXXAAVGTPDRSQSCSRPSAMARGDPTSTSKSAEAMNPAAAXXXXXXXXXXXXLLPPRPEISGGRAGGDGKR 396
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BLAST of mRNA_E-siliculosus-1a_M_contig86.16653.1 vs. uniprot
Match: A0A6H5KWM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWM0_9PHAE)

HSP 1 Score: 378 bits (970), Expect = 1.910e-127
Identity = 253/288 (87.85%), Postives = 262/288 (90.97%), Query Frame = 0 
Query:  122 LADVEAAKSRVRAAEAAREKERDSFAVVAGKEHRRRMSDALATAVAVAEGVTAEVVADAERLEREREAMLVPQVSALVGGQAFFMRRSATVLEKLAAQLPHSALALCRLLGPRPMENPSPPPPLPRRSSIQQTLSPSVAPVDVSGHSAGSSSTVVRGFDGXXXXXXXXXXXXMGLVSPNQQAATTT-PVFSPPGLRPHGAKFEPVGLSPTGSSASXXXXXXAAVGAPDRSQSCSRPNAMARGDPASTSKSAEAMNPAAAXXXXXXXXXXXXPPRPEINSGRAGGDGTR 408
            +ADVEAAKSRVRAAEAAREKERDSFAVVAGKEHRRRMSDALATAVAVA+GVTAEVVADAERLERER AMLVPQVSALVGGQAFFMRRSATVLEKLAAQLPHSALALCRLLGPRPMENP  P       SIQQT S S+A VDVSGHSAGSSSTVVRGFD XXXXXXXXXXXX GL+SP++QAATTT P  SPPGL+ HGAKFEPVGLSPTGSSA XXXXXXAAVG PDRSQSCSRPNAMARGDP STSKSAEA+NPAAAXXXXXXXXXXXX PRPE + GRAGGDG R
Sbjct:    1 MADVEAAKSRVRAAEAAREKERDSFAVVAGKEHRRRMSDALATAVAVADGVTAEVVADAERLERERAAMLVPQVSALVGGQAFFMRRSATVLEKLAAQLPHSALALCRLLGPRPMENPFTPXXXXXXXSIQQTFSTSIASVDVSGHSAGSSSTVVRGFDXXXXXXXXXXXXXXGLISPHRQAATTTTPALSPPGLQSHGAKFEPVGLSPTGSSAXXXXXXXAAVGTPDRSQSCSRPNAMARGDPTSTSKSAEAINPAAAXXXXXXXXXXXXXPRPETSGGRAGGDGKR 288
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig86.16653.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBT1_ECTSI3.250e-20090.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWM0_9PHAE1.910e-12787.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 118..145
IPR027267AH/BAR domain superfamilyGENE3D1.20.1270.60coord: 1..223
e-value: 5.4E-15
score: 57.5
IPR027267AH/BAR domain superfamilySUPERFAMILY103657BAR/IMD domain-likecoord: 2..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig86contigE-siliculosus-1a_M_contig86:325861..329564 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig86.16653.1mRNA_E-siliculosus-1a_M_contig86.16653.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig86 324750..330362 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig86.16653.1 ID=prot_E-siliculosus-1a_M_contig86.16653.1|Name=mRNA_E-siliculosus-1a_M_contig86.16653.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=409bp
MHKTLAELQFNMQVYLTSWQAMCRASAAIAKGLAKLARGSDGAVGARGDN
DGVKDKQGVSPLVDMARLYDSAHRAIDRGVREPTQRQVPFRHRADTTLRE
TGALLSRFPPIFAKVTRRKQVLADVEAAKSRVRAAEAAREKERDSFAVVA
GKEHRRRMSDALATAVAVAEGVTAEVVADAERLEREREAMLVPQVSALVG
GQAFFMRRSATVLEKLAAQLPHSALALCRLLGPRPMENPSPPPPLPRRSS
IQQTLSPSVAPVDVSGHSAGSSSTVVRGFDGGGSRGGGSSSSTMGLVSPN
QQAATTTPVFSPPGLRPHGAKFEPVGLSPTGSSASSPPPPPAAVGAPDRS
QSCSRPNAMARGDPASTSKSAEAMNPAAAAAAAAAPAAPLLPPRPEINSG
RAGGDGTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027267AH/BAR_dom_sf