prot_E-siliculosus-1a_M_contig86.16648.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig86.16648.1
Unique Nameprot_E-siliculosus-1a_M_contig86.16648.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length77
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig86.16648.1 vs. uniprot
Match: A0A6H5JFX2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFX2_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 6.870e-31
Identity = 59/75 (78.67%), Postives = 61/75 (81.33%), Query Frame = 0
Query:    1 MRSDPRLVKMWWDGGLVMVPAIVEDAAGVTGLPGVPFTHGPGSSPSRRWGQRLTSQLQRTRRTKIDLSLVAGGIL 75
            MRSDPRLVKMWWDG LVMV AIVEDAAGVTGLPGV FTHGP          RLTSQLQR RRTK+DLSLVAGG+L
Sbjct:   12 MRSDPRLVKMWWDGDLVMVTAIVEDAAGVTGLPGVTFTHGPWKLTIEALKTRLTSQLQRMRRTKMDLSLVAGGML 86          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16648.1 vs. uniprot
Match: D8LBS6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS6_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 2.620e-15
Identity = 43/71 (60.56%), Postives = 48/71 (67.61%), Query Frame = 0
Query:    1 MRSDPRLVKMWWDGGLVMVPAIVEDAAGVTGLPGVPFTHGPGSSPSRRWGQRLTSQLQRTRRTKIDLSLVA 71
            MRS+PRL  MWWDGGLVMV AIVEDAAGVTGLPGV FTH        RW  +LT +   T   KID++  A
Sbjct:    1 MRSNPRLANMWWDGGLVMVSAIVEDAAGVTGLPGVTFTHS-------RW--KLTIEALET---KIDITAPA 59          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16648.1 vs. uniprot
Match: D7FWI3_ECTSI (Global transcription factor group n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWI3_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 4.550e-8
Identity = 29/74 (39.19%), Postives = 37/74 (50.00%), Query Frame = 0
Query:    3 SDPRLVKMWWDGGLVMVPAIVEDAAGVTGLPGVPFTHGPGSSPSRRWGQRLTSQLQRTRRTKIDLSLVAGGILG 76
            SDPRLVKM WDGGLVMV A+V+DA G   +P +  T  P        G ++        +     S   GG +G
Sbjct: 2088 SDPRLVKMQWDGGLVMVTAVVKDAKGGKAIPDIDLTQSPSGMTMEALGVKIRIAAPPEAKNNDGFSAACGGAVG 2161          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16648.1 vs. uniprot
Match: A0A6H5KNI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI2_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 2.180e-7
Identity = 28/74 (37.84%), Postives = 37/74 (50.00%), Query Frame = 0
Query:    3 SDPRLVKMWWDGGLVMVPAIVEDAAGVTGLPGVPFTHGPGSSPSRRWGQRLTSQLQRTRRTKIDLSLVAGGILG 76
            SDPRLVKM WDGGLVMV A+++DA G   +P +  T  P        G ++        +     S   GG +G
Sbjct: 2814 SDPRLVKMRWDGGLVMVTAVIKDAVGGKAIPHIDLTQSPSGMTIEALGVKVRIAAPPEAKNMDGFSAACGGAVG 2887          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig86.16648.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JFX2_9PHAE6.870e-3178.67Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LBS6_ECTSI2.620e-1560.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWI3_ECTSI4.550e-839.19Global transcription factor group n=1 Tax=Ectocarp... [more]
A0A6H5KNI2_9PHAE2.180e-737.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig86contigE-siliculosus-1a_M_contig86:284026..284256 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig86.16648.1mRNA_E-siliculosus-1a_M_contig86.16648.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig86 283546..284256 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig86.16648.1 ID=prot_E-siliculosus-1a_M_contig86.16648.1|Name=mRNA_E-siliculosus-1a_M_contig86.16648.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=77bp
MRSDPRLVKMWWDGGLVMVPAIVEDAAGVTGLPGVPFTHGPGSSPSRRWG
QRLTSQLQRTRRTKIDLSLVAGGILG*
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