prot_E-siliculosus-1a_M_contig86.16639.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig86.16639.1
Unique Nameprot_E-siliculosus-1a_M_contig86.16639.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length163
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig86.16639.1 vs. uniprot
Match: D8LBS0_ECTSI (eIF-5a domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS0_ECTSI)

HSP 1 Score: 322 bits (825), Expect = 8.390e-111
Identity = 158/162 (97.53%), Postives = 160/162 (98.77%), Query Frame = 0
Query:    1 MATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGKEIKDKFEEGATLCVTVMAAMGHEQIVTYKEESG 162
            MATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYP+GFG EIK KF+EGATLCVTVMAAMGHEQIVTYKEESG
Sbjct:   39 MATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPEGFGNEIKAKFDEGATLCVTVMAAMGHEQIVTYKEESG 200          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16639.1 vs. uniprot
Match: A0A6H5KDL5_9PHAE (eIF-5a domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDL5_9PHAE)

HSP 1 Score: 321 bits (823), Expect = 1.100e-109
Identity = 158/162 (97.53%), Postives = 159/162 (98.15%), Query Frame = 0
Query:    1 MATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGKEIKDKFEEGATLCVTVMAAMGHEQIVTYKEESG 162
            MATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYP+GFG EIK KFEEG TLCVTVMAAMGHEQIVTYKEESG
Sbjct:   93 MATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPEGFGNEIKAKFEEGLTLCVTVMAAMGHEQIVTYKEESG 254          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16639.1 vs. uniprot
Match: A0A835Z7R2_9STRA (Eukaryotic translation initiation factor 5A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7R2_9STRA)

HSP 1 Score: 245 bits (626), Expect = 5.880e-81
Identity = 114/160 (71.25%), Postives = 141/160 (88.12%), Query Frame = 0
Query:    2 ATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGKEIKDKFEEGATLCVTVMAAMGHEQIVTYKEES 161
            AT++ LN+YDFT +DAGASHT P +AGQIRKGGYIVIKG PCKV NVSTSKTGKHGHAKANFTA DIFTGKKLED++P++H TSVP V+R +YQLLDISDDGF SLLTE GDTKDDL+LP +P+GF ++++ +F+ G TL VTV++AMGH+Q++ YKE++
Sbjct:    6 ATDEALNNYDFTSSDAGASHTFPMDAGQIRKGGYIVIKGRPCKVANVSTSKTGKHGHAKANFTAIDIFTGKKLEDIVPTSHATSVPNVARVDYQLLDISDDGFLSLLTESGDTKDDLKLPGFPEGFDEQLRTEFDAGKTLIVTVVSAMGHDQVMAYKEDT 165          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16639.1 vs. uniprot
Match: A0A7S2UU65_9STRA (Eukaryotic translation initiation factor 5A n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU65_9STRA)

HSP 1 Score: 226 bits (576), Expect = 2.050e-73
Identity = 109/156 (69.87%), Postives = 134/156 (85.90%), Query Frame = 0
Query:    6 KLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGKEIKDKFEEGATLCVTVMAAMGHEQIVTYKEES 161
            KL+D+ F   ++GAS TIP EAGQIRKGG+IVIKG PCKVVNVSTSKTGKHGHAKANFTA DIFTGKK ED++P+THTTSVP VSR EYQL+DISDDG+ SLLT+ GDTKDDL LPT+P+GF  EI+  F+EG ++ +TV++AMG +Q+V+ KE++
Sbjct:    7 KLDDFHFDTGESGASLTIPMEAGQIRKGGHIVIKGKPCKVVNVSTSKTGKHGHAKANFTAIDIFTGKKYEDIVPTTHTTSVPNVSRAEYQLIDISDDGYLSLLTDSGDTKDDLVLPTHPEGFADEIRAAFDEGKSMVLTVLSAMGTDQVVSMKEDT 162          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16639.1 vs. uniprot
Match: A0A8K1CGM3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGM3_PYTOL)

HSP 1 Score: 222 bits (565), Expect = 8.480e-72
Identity = 106/154 (68.83%), Postives = 126/154 (81.82%), Query Frame = 0
Query:    8 NDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGKEIKDKFEEGATLCVTVMAAMGHEQIVTYKEES 161
            +DY F  TDAGAS T P EAGQI+K G+I+IKGHPCKVVNVSTSKTGKHGHAK NFTA DIFT KKLED++PSTHTTSVP VSR EY LLDIS+D F SL+ E GDT++D++LP+YPDGF  EI+  FE+G  L VTV+ A G EQI++ KE++
Sbjct:    3 DDYTFESTDAGASETYPMEAGQIKKNGFIMIKGHPCKVVNVSTSKTGKHGHAKCNFTALDIFTNKKLEDIVPSTHTTSVPFVSRKEYTLLDISEDDFVSLMDESGDTREDVKLPSYPDGFANEIRSDFEDGKQLVVTVLKACGTEQIISKKEDT 156          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16639.1 vs. uniprot
Match: M4B4L4_HYAAE (Eukaryotic translation initiation factor 5A n=18 Tax=Peronosporaceae TaxID=4777 RepID=M4B4L4_HYAAE)

HSP 1 Score: 219 bits (558), Expect = 1.020e-70
Identity = 106/160 (66.25%), Postives = 130/160 (81.25%), Query Frame = 0
Query:    1 MATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGKEIKDKFEEGATLCVTVMAAMGHEQIVTYKEE 160
            MA E++  D+ F  TDAGAS T PSEAGQIRKGG+I+IKGHPCKVVN+STSKTGKHGHAK NFTA DIFT KK ED++PSTHTTSVP VSR EY LLDI+DD FCSL+ + GDT++D++LPT+P+ FG+EI+  F +G  L +TV+ A G EQI+  KE+
Sbjct:    1 MAEEEQ--DFTFHSTDAGASETYPSEAGQIRKGGFIMIKGHPCKVVNMSTSKTGKHGHAKCNFTALDIFTNKKYEDIVPSTHTTSVPFVSRAEYTLLDITDDDFCSLMDDSGDTREDIKLPTFPETFGEEIRADFNDGKQLVLTVLKACGTEQIIAKKED 158          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16639.1 vs. uniprot
Match: W7U6Y6_9STRA (Eukaryotic translation initiation factor 5A n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6Y6_9STRA)

HSP 1 Score: 219 bits (558), Expect = 1.090e-70
Identity = 106/155 (68.39%), Postives = 131/155 (84.52%), Query Frame = 0
Query:    7 LNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGKEIKDKFEEGATLCVTVMAAMGHEQIVTYKEES 161
            + DYDF+GT AGAS   PSEAGQI+KGGYI+IKG PCKVVNVSTSKTGKHGHAKANFTA DIF GKK+EDV+P+THTT VP V+R+EYQLLDI +DGF SLL E+G T+DDL+LP YP+GF +EI   +++G +L V+V++A G +QI+ YKEE+
Sbjct:    9 IEDYDFSGTTAGASDVFPSEAGQIKKGGYIMIKGRPCKVVNVSTSKTGKHGHAKANFTAIDIFNGKKVEDVVPTTHTTYVPNVNRSEYQLLDI-EDGFVSLLQEDGGTRDDLKLPDYPEGFDQEILKAYQDGKSLSVSVLSACGIDQIIAYKEEA 162          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16639.1 vs. uniprot
Match: K3WUI8_GLOUD (Eukaryotic translation initiation factor 5A n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUI8_GLOUD)

HSP 1 Score: 215 bits (548), Expect = 3.280e-69
Identity = 101/154 (65.58%), Postives = 127/154 (82.47%), Query Frame = 0
Query:    8 NDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGKEIKDKFEEGATLCVTVMAAMGHEQIVTYKEES 161
            +DY F  TDAGAS T P EAGQIRKGG+I+IKGHPCKVV+VSTSKTGKHGHAK NFTA DIFT KKLED++PSTHTTSVP VSR+EY LLDI+DD F SL+ + G+T++D++LPT+PD F +EI+  F+ G  L +TV+ A G EQ+++ KE++
Sbjct:    3 DDYTFESTDAGASDTFPCEAGQIRKGGFIMIKGHPCKVVSVSTSKTGKHGHAKCNFTALDIFTNKKLEDIVPSTHTTSVPFVSRSEYTLLDITDDDFLSLMDDSGETREDIKLPTFPDNFAEEIRADFDAGKQLVLTVLKACGTEQVISKKEDT 156          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16639.1 vs. uniprot
Match: A0A5D6XTX1_9STRA (Eukaryotic translation initiation factor 5A n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTX1_9STRA)

HSP 1 Score: 215 bits (548), Expect = 3.280e-69
Identity = 104/153 (67.97%), Postives = 124/153 (81.05%), Query Frame = 0
Query:    9 DYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGKEIKDKFEEGATLCVTVMAAMGHEQIVTYKEES 161
            DY F  TDAGAS T P EAGQIRKGG+I+IKGHPCKVV+VSTSKTGKHGHAK NFTA DIFT KKLED++PSTHTTSVP V+R EY LLDISDD F +L+ + GDT+DD++LPT+PD F  EI+  F+ G  L VTV+ A G EQI++ KE++
Sbjct:    5 DYTFESTDAGASDTYPCEAGQIRKGGFIMIKGHPCKVVSVSTSKTGKHGHAKCNFTALDIFTNKKLEDIVPSTHTTSVPFVARAEYTLLDISDDDFVTLMDDGGDTRDDIKLPTFPDNFADEIRADFDSGKQLVVTVLKACGIEQIISKKEDT 157          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16639.1 vs. uniprot
Match: A0A6A3TKK1_9STRA (Eukaryotic translation initiation factor 5A n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TKK1_9STRA)

HSP 1 Score: 215 bits (547), Expect = 8.990e-69
Identity = 102/159 (64.15%), Postives = 128/159 (80.50%), Query Frame = 0
Query:    4 EDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGKEIKDKFEEGATLCVTVMAAMGHEQIVTYKEESG 162
            E + +D++F  TDAGAS T PSEAGQIRKGG+I+IKGHPCKVVNVSTSKTGKHGHAK NFTA DIFT KK ED++PSTHTTSVP VSR EY LLDI+DD F SL+ + G+T++D++LPT+P+ F  EI+  F++G  L +TV+ A G EQ++  KE+ G
Sbjct:   20 EHEEHDFEFHSTDAGASETYPSEAGQIRKGGFIMIKGHPCKVVNVSTSKTGKHGHAKCNFTALDIFTNKKYEDIVPSTHTTSVPFVSRAEYTLLDITDDDFVSLMDDSGETREDIKLPTFPETFADEIRADFDDGKQLVLTVLKACGTEQVIAKKEDLG 178          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig86.16639.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBS0_ECTSI8.390e-11197.53eIF-5a domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KDL5_9PHAE1.100e-10997.53eIF-5a domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835Z7R2_9STRA5.880e-8171.25Eukaryotic translation initiation factor 5A n=2 Ta... [more]
A0A7S2UU65_9STRA2.050e-7369.87Eukaryotic translation initiation factor 5A n=1 Ta... [more]
A0A8K1CGM3_PYTOL8.480e-7268.83Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
M4B4L4_HYAAE1.020e-7066.25Eukaryotic translation initiation factor 5A n=18 T... [more]
W7U6Y6_9STRA1.090e-7068.39Eukaryotic translation initiation factor 5A n=2 Ta... [more]
K3WUI8_GLOUD3.280e-6965.58Eukaryotic translation initiation factor 5A n=1 Ta... [more]
A0A5D6XTX1_9STRA3.280e-6967.97Eukaryotic translation initiation factor 5A n=1 Ta... [more]
A0A6A3TKK1_9STRA8.990e-6964.15Eukaryotic translation initiation factor 5A n=3 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020189Translation elongation factor, IF5A C-terminalSMARTSM01376eIF_5a_2coord: 88..158
e-value: 1.2E-32
score: 124.5
IPR020189Translation elongation factor, IF5A C-terminalPFAMPF01287eIF-5acoord: 88..158
e-value: 1.2E-26
score: 92.6
IPR001884Translation elongation factor IF5A-likeTIGRFAMTIGR00037TIGR00037coord: 22..156
e-value: 7.8E-40
score: 133.7
IPR001884Translation elongation factor IF5A-likePIRSFPIRSF003025Transl_init_eIF5Acoord: 1..162
e-value: 3.5E-60
score: 200.0
IPR001884Translation elongation factor IF5A-likePANTHERPTHR11673TRANSLATION INITIATION FACTOR 5A-RELATEDcoord: 12..162
NoneNo IPR availableGENE3D2.40.50.140coord: 89..162
e-value: 9.4E-28
score: 98.1
NoneNo IPR availablePANTHERPTHR11673:SF32EUKARYOTIC TRANSLATION INITIATION FACTOR 5A-2coord: 12..162
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 4..88
e-value: 7.5E-36
score: 123.8
IPR013185Translation elongation factor, KOW-likePFAMPF08207EFP_Ncoord: 27..80
e-value: 2.4E-5
score: 24.3
IPR019769Translation elongation factor, IF5A, hypusine sitePROSITEPS00302IF5A_HYPUSINEcoord: 53..60
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 18..96
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 89..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig86contigE-siliculosus-1a_M_contig86:228139..230916 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig86.16639.1mRNA_E-siliculosus-1a_M_contig86.16639.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig86 224808..233104 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig86.16639.1 ID=prot_E-siliculosus-1a_M_contig86.16639.1|Name=mRNA_E-siliculosus-1a_M_contig86.16639.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=163bp
MATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVST
SKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDIS
DDGFCSLLTEEGDTKDDLQLPTYPDGFGKEIKDKFEEGATLCVTVMAAMG
HEQIVTYKEESG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR008991Translation_prot_SH3-like_sf
IPR019769Trans_elong_IF5A_hypusine_site
IPR013185Transl_elong_KOW-like
IPR014722Rib_L2_dom2
IPR001884IF5A-like
IPR020189Transl_elong_IF5A_C