prot_E-siliculosus-1a_M_contig85.16609.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig85.16609.1
Unique Nameprot_E-siliculosus-1a_M_contig85.16609.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length181
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig85.16609.1 vs. uniprot
Match: D7FWU3_ECTSI (Copper transport protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWU3_ECTSI)

HSP 1 Score: 298 bits (762), Expect = 3.470e-101
Identity = 172/180 (95.56%), Postives = 176/180 (97.78%), Query Frame = 0
Query:    1 MSHDHGSXXXXXXXXXXXXXXXGDQFCNGDGRVMLMGFQSATSASVDCILFLFEGAGVDTKTKYVFAALGAFCMGFANEMIRYGRDRMAKTSDVSLASDLKMTAAFAVQMYLAYMLMLLVMLYEYVILIMLISGLATGHLLTLRWSADRRRAALRDSGAKTPPEVMGSSGTPCCNTDTVA 180
            MSHDHGSXXXXXXXXXXXXXXXGDQFCNGDG VMLMGFQSATSASV+CILFLFEGAGVDTKTKY FAALGAF MGFANEMIRYGRDRMAKTSDVSLASDLKMTAAFAVQ+YLAYMLMLLVMLYEYVILIM+ISGLATGHLLTLRWSA RRRAALRD+GAKTPPEVMGSSGTPCCNTDTVA
Sbjct:    1 MSHDHGSXXXXXXXXXXXXXXXGDQFCNGDGTVMLMGFQSATSASVNCILFLFEGAGVDTKTKYAFAALGAFFMGFANEMIRYGRDRMAKTSDVSLASDLKMTAAFAVQIYLAYMLMLLVMLYEYVILIMIISGLATGHLLTLRWSAGRRRAALRDAGAKTPPEVMGSSGTPCCNTDTVA 180          
BLAST of mRNA_E-siliculosus-1a_M_contig85.16609.1 vs. uniprot
Match: D7FH71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH71_ECTSI)

HSP 1 Score: 248 bits (632), Expect = 5.230e-81
Identity = 136/180 (75.56%), Postives = 144/180 (80.00%), Query Frame = 0
Query:    1 MSHDHGSXXXXXXXXXXXXXXXGDQFCNGDGRVMLMGFQSATSASVDCILFLFEGAGVDTKTKYVFAALGAFCMGFANEMIRYGRDRMAKTSDVSLASDLKMTAAFAVQMYLAYMLMLLVMLYEYVILIMLISGLATGHLLTLRWSADRRRAALRDSGAKTPPEVMGSSGTPCCNTDTVA 180
            MSHDHGS               GDQFC GDG VMLMGFQ+ATSASV CILFLFEGAGVDTKTKY FAALGAFCMGFANEMIRYGRDRMAK S V + SD+K T AFAVQM+LAYMLMLLVMLYEYVILIM+ISGLA GHL+TLR SA RRRAAL+D GAK    V GSSGTPCCN+ T A
Sbjct:   28 MSHDHGSHSSDASSMASSMTDMGDQFCEGDGTVMLMGFQAATSASVRCILFLFEGAGVDTKTKYAFAALGAFCMGFANEMIRYGRDRMAKASGVCVGSDVKATFAFAVQMFLAYMLMLLVMLYEYVILIMIISGLAAGHLVTLRLSAGRRRAALKD-GAKEASGVAGSSGTPCCNSATQA 206          
BLAST of mRNA_E-siliculosus-1a_M_contig85.16609.1 vs. uniprot
Match: A0A819B819_9BILA (Copper transport protein n=7 Tax=Adineta steineri TaxID=433720 RepID=A0A819B819_9BILA)

HSP 1 Score: 78.6 bits (192), Expect = 3.560e-15
Identity = 58/154 (37.66%), Postives = 74/154 (48.05%), Query Frame = 0
Query:   33 VMLMGFQSATSASVDCILFLFEGAGVDTKTKYVFAALGAFCMGFANEMIRYGRDRMAKTSDVS---LASDLKMTAAFAVQMYLAYMLMLLVMLYEYVILIMLISGLATGHLLTLRWSADRRRAALRDSGAKTPPEVMGSS------GTPCCNTD 177
            VM  GFQ A      CILFLF+G  VDT  KY F  +G  CMG  N  + Y R  +   S  +   L   + ++  +A+Q+ LAY +MLLVM YE  I I LI GL  GH +     A  R      S     PE   ++       TPCC T+
Sbjct:   12 VMQNGFQVANGKD-GCILFLFQGWNVDTHVKYAFMLIGVICMGLLNGALAYIRHCLVNNSKHTSSLLIHQIYLSLLYAIQIVLAYWMMLLVMTYETGIFISLIGGLVLGHFIFGYIEAKNR------SSTSIQPETTNTTFQNQFNSTPCCQTN 158          
BLAST of mRNA_E-siliculosus-1a_M_contig85.16609.1 vs. uniprot
Match: A0A0L0D9P1_THETB (Copper transport protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D9P1_THETB)

HSP 1 Score: 77.4 bits (189), Expect = 2.200e-14
Identity = 69/193 (35.75%), Postives = 93/193 (48.19%), Query Frame = 0
Query:   26 FCNGDGRVMLMGFQSATSASV-----DCILFLFEGAGVDTKTKYVFAALGAFCMGFANEMIRYGRDRMA-----KTSDV----------SLAS--------DLKMTAAFAVQMYLAYMLMLLVMLYEYVILIMLISGLATGHLLTLR----WSADRRRAALRDSGAKTPPEVMGS---------SGTPCCNTD 177
            FC G GRVM+ GFQ+  + S       CIL+LF+GA VDT  KY  A +G+F +  A   ++  R+R++     ++S            SL S        DL + A FA+QM LAY +MLLVMLYE  I   +I G     LL +R    W   R R     S ++  P V GS         + +PCC  D
Sbjct:    2 FCKGMGRVMMPGFQTTYNPSKMIEGNSCILWLFQGAVVDTPGKYALACIGSFSLVLAMVFLQLVRERVSLWASRRSSSXXXXXXXXXXPSLCSGGLPMLGLDLAVAALFALQMVLAYWIMLLVMLYEAWIFTSIIIGFFVSQLLAIRLRRRW---RERTCGCPSSSEQAPLVAGSKMDTVHAAAASSPCCGGD 191          
BLAST of mRNA_E-siliculosus-1a_M_contig85.16609.1 vs. uniprot
Match: A0A835YUT5_9STRA (Copper transport protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUT5_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 4.620e-14
Identity = 57/160 (35.62%), Postives = 83/160 (51.88%), Query Frame = 0
Query:   26 FCNGDGRVMLMGFQSATSASVDCILFLFEGAGVDTKTKYVFAALGAFCMGFANEMIRYGRDRMAK---------TSDV-SLASDLKMTAAFAVQMYLAYMLMLLVMLYEYVILIMLISGLATGHLLTLRWSADRRRAALRDS----------GAKTPPEV 165
            FC G G VM  GF+ + +  + CI++LFEGA +DT  KY  A +G F + FANE IR+ R R             SD+ + A D+ +   +  QM +AY LML+VM YE  +   ++ GL  G+L T  +   R + A  D           G+ TPP++
Sbjct:   23 FCEGTGMVMQKGFRVSFTNGM-CIIWLFEGAVLDTAGKYTGAVIGTFLLAFANEGIRWLRSRAMSGKAPFTRCHLSDMPAFARDVVLALMYGFQMLIAYWLMLIVMTYEVFLFTAILLGLTAGYL-TFNYVDRRAKEAATDCNCAVSAAKTVGSNTPPQL 180          
BLAST of mRNA_E-siliculosus-1a_M_contig85.16609.1 vs. uniprot
Match: A0A815NM06_9BILA (Copper transport protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A815NM06_9BILA)

HSP 1 Score: 77.0 bits (188), Expect = 2.960e-13
Identity = 57/154 (37.01%), Postives = 74/154 (48.05%), Query Frame = 0
Query:   33 VMLMGFQSATSASVDCILFLFEGAGVDTKTKYVFAALGAFCMGFANEMIRYGRDRMAKTSDVSLA---SDLKMTAAFAVQMYLAYMLMLLVMLYEYVILIMLISGLATGHLLTLRWSADRRRAALRDSGAKTPPEVMGSS------GTPCCNTD 177
            VM  GFQ A      CILFLF+G  VDT  KY F  +G  CMG  N  + Y R  +   S  + +     + ++  +A+Q+ LAY +MLLVM YE  I I LI GL  GH +     A  R      S     PE   ++       TPCC T+
Sbjct:  288 VMQNGFQVANGKD-GCILFLFQGWNVDTHVKYAFMLIGVICMGLLNGALAYVRHCLVNNSKHTSSLFIHQIYLSLLYAIQIVLAYWMMLLVMTYETGIFISLICGLVLGHFIFGYIEAKNR------SSTSIQPETTNTTFQNQFNSTPCCQTN 434          
BLAST of mRNA_E-siliculosus-1a_M_contig85.16609.1 vs. uniprot
Match: W7U9L9_9STRA (Copper transport protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U9L9_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 3.390e-12
Identity = 60/174 (34.48%), Postives = 81/174 (46.55%), Query Frame = 0
Query:   26 FCNGDGRVMLMGFQSATSASVDCILFLFEGAGVDTKTKYVFAALGAFCMGFANEMIRYGRDRMA------------KTSDVSLASDLKMTAA--------FAVQMYLAYMLMLLVMLYEYVILIMLISGLATGHLLTLRWSADRRRAALRDSGAKTPPEVMGSSGTPCCNTDTV 179
            FC G+G VM  GF         CIL+LF+GA V+T  KY  A +G F + F+ E +R+ R  M             K  +V     L+            F V M++AY++MLLVMLYE+ I I L+ GLA G+     W A       R +  K  P  +G+ G  C   D V
Sbjct:   70 FCQGEGSVMNNGFVFMPQDGY-CILYLFQGAVVNTAGKYAGALIGTFFLAFSVEALRHFRLWMRLRRATVVLAHGEKEGEVVTGPPLRAQVLPIFLEALLFGVHMFVAYLIMLLVMLYEWAIFISLLLGLAAGYFTFEMWEA------YRVANKKQLPSAIGAIGGGCGCVDEV 236          
BLAST of mRNA_E-siliculosus-1a_M_contig85.16609.1 vs. uniprot
Match: W7TTP6_9STRA (Copper transport protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTP6_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.520e-9
Identity = 52/152 (34.21%), Postives = 72/152 (47.37%), Query Frame = 0
Query:   48 CILFLFEGAGVDTKTKYVFAALGAFCMGFANEMIRYGRDRMA------------KTSDVSLASDLKMTAA--------FAVQMYLAYMLMLLVMLYEYVILIMLISGLATGHLLTLRWSADRRRAALRDSGAKTPPEVMGSSGTPCCNTDTV 179
            CIL+LF+GA V+T  KY  A +G F + F+ E +R+ R  M             K  +V     L+            F V M++AY++MLLVMLYE+ I I L+ GLA G+     W A       R +  K  P  +G+ G  C   D V
Sbjct:   33 CILYLFQGAVVNTAGKYAGALIGTFFLAFSVEALRHFRLWMRLRRATVVLAHGEKEGEVVTGPPLRAQVLPIFLEALLFGVHMFVAYLIMLLVMLYEWAIFISLLLGLAAGYFTFEMWEA------YRVANKKQLPSAIGAIGGGCGCVDEV 178          
BLAST of mRNA_E-siliculosus-1a_M_contig85.16609.1 vs. uniprot
Match: A0A1V9ZD67_9STRA (3-ketoacyl-CoA thiolase A n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZD67_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.890e-5
Identity = 40/126 (31.75%), Postives = 61/126 (48.41%), Query Frame = 0
Query:   24 DQFCNGDGRVMLMGFQSATSASVDCILFLFEGAGVDTKTKYVFAALGAFCMGFANEMIRYGRD--------RMAKTSDVSLASDLKMTAAFAVQMYLAYMLMLLVMLYEYVILIMLISGLATGHLL 141
            ++FC G   VM  GFQ+    +  C+   F+   +DT  KY F  +G F +   NE +   R+        R  KT  V     + +T  +  QM +AY+ ML+VM+Y+  + I LI G   G +L
Sbjct:  207 ERFCTG-ASVMFSGFQTTVHGT--CVKLFFQPWVLDTSVKYAFGFIGVFALPLMNEYLVRTRESLRQTFRKRKNKTPSVKQMHKIILTLLYMAQMTIAYLAMLVVMIYDTGLFISLILGFGFGFIL 329          
BLAST of mRNA_E-siliculosus-1a_M_contig85.16609.1 vs. uniprot
Match: A0A1V9Z435_9STRA (Copper transport protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z435_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 5.300e-5
Identity = 43/143 (30.07%), Postives = 67/143 (46.85%), Query Frame = 0
Query:   24 DQFCNGDGRVMLMGFQSATSASVDCILFLFEGAGVDTKTKYVFAALGAFCMGFANEMIRYGRDRMA----KTSDVSLASDLKMTAAFAVQMYLAYMLMLLVMLYEYVILIMLISGLATGHLLTLRWSADRRRAALRDSGAKTP 162
            + FC G   VM  GFQ+    +  C+   F+   +++  KY F  LG F +   NE +   R+R+     K +       L +T  + +QM LAY+ ML+VM+Y+  + I LI G   G L    +  D++ AA        P
Sbjct:  208 EPFCTG-ASVMFSGFQTTVHGT--CVKLFFQPWVLNSGVKYAFGFLGVFALPLLNEYLVRTRERLRQQLRKRAGNKRLHKLVLTVLYMMQMTLAYLAMLVVMIYDTGLFIALIFGFGAGFLF---FKVDKQTAAAATGDMAAP 344          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig85.16609.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7FWU3_ECTSI3.470e-10195.56Copper transport protein n=2 Tax=Ectocarpus TaxID=... [more]
D7FH71_ECTSI5.230e-8175.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A819B819_9BILA3.560e-1537.66Copper transport protein n=7 Tax=Adineta steineri ... [more]
A0A0L0D9P1_THETB2.200e-1435.75Copper transport protein n=1 Tax=Thecamonas trahen... [more]
A0A835YUT5_9STRA4.620e-1435.63Copper transport protein n=1 Tax=Tribonema minus T... [more]
A0A815NM06_9BILA2.960e-1337.01Copper transport protein n=1 Tax=Adineta steineri ... [more]
W7U9L9_9STRA3.390e-1234.48Copper transport protein n=3 Tax=Monodopsidaceae T... [more]
W7TTP6_9STRA1.520e-934.21Copper transport protein n=1 Tax=Nannochloropsis g... [more]
A0A1V9ZD67_9STRA1.890e-531.753-ketoacyl-CoA thiolase A n=1 Tax=Thraustotheca cl... [more]
A0A1V9Z435_9STRA5.300e-530.07Copper transport protein n=1 Tax=Achlya hypogyna T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007274Ctr copper transporterPANTHERPTHR12483SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERScoord: 1..174
NoneNo IPR availablePANTHERPTHR12483:SF27COPPER TRANSPORTER 1A, ISOFORM C-RELATEDcoord: 1..174
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..63
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 146..180
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 64..81
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 125..145
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 102..119
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 120..124
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 82..101
NoneNo IPR availableTMHMMTMhelixcoord: 110..132
NoneNo IPR availableTMHMMTMhelixcoord: 64..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig85contigE-siliculosus-1a_M_contig85:457551..467284 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig85.16609.1mRNA_E-siliculosus-1a_M_contig85.16609.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig85 457471..467294 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig85.16609.1 ID=prot_E-siliculosus-1a_M_contig85.16609.1|Name=mRNA_E-siliculosus-1a_M_contig85.16609.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=181bp
MSHDHGSHGSDASSMASSMSDMGDQFCNGDGRVMLMGFQSATSASVDCIL
FLFEGAGVDTKTKYVFAALGAFCMGFANEMIRYGRDRMAKTSDVSLASDL
KMTAAFAVQMYLAYMLMLLVMLYEYVILIMLISGLATGHLLTLRWSADRR
RAALRDSGAKTPPEVMGSSGTPCCNTDTVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007274Cop_transporter