prot_E-siliculosus-1a_M_contig85.16601.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig85.16601.1
Unique Nameprot_E-siliculosus-1a_M_contig85.16601.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length367
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig85.16601.1 vs. uniprot
Match: D7G5U8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5U8_ECTSI)

HSP 1 Score: 281 bits (718), Expect = 7.980e-89
Identity = 181/289 (62.63%), Postives = 191/289 (66.09%), Query Frame = 0 
Query:   89 VALLQPNLAKATRSDYQS------CERIFRGFGG---RVSGSKTPLCSSHDAVLRMLGCYRFRSLIEN-NTAAAMPGRARKWSSFPCWGFSFPPLLSKTTHMNPLLTPALASFRNEPGKDDWYSFKPHVDAIIAKCVTLGLMTERSMLDDFVCRGNDLLLQFGVPEKVLRIFTDLLPNARNISRETKLRDRSRLKAIIKISGGGKLAPTLATAHLSGYAGAYQQAASQASTIAAGNTAPLAPVGGGPLTVPLPGLATQHTFSSRAKGRSKARAPGGGRGSSGPPVPVSA 367
            VALLQPNLAKAT     +      C  +F G  G   RV G +    S    V  +       S  +  +TA  +   AR         F    LLSKTT MNPL T AL   R E GK+DWYSFKPHVDAIIAK VTLGLMT RSMLDDFV RGND+LLQFGVPEKV  IFTDL+PNARNISRET LRDRSRLKAI  ISGG KLA TLATAHLSGYAGAYQQAASQASTIAAG TAPLAPVGG PL VPLPGLAT HT SSR K            GSSGPP P SA
Sbjct:   85 VALLQPNLAKATVVASSTPLADLPCMAVF-GLAGSEPRVHGDRVLFPSGEALVTEVAPLPGVPSYFQAVDTAMGIERGARDAPPL----FRKALLLSKTTQMNPLPTTALTPLRTEKGKEDWYSFKPHVDAIIAKGVTLGLMTWRSMLDDFVYRGNDMLLQFGVPEKVFGIFTDLMPNARNISRETTLRDRSRLKAIDTISGGWKLAATLATAHLSGYAGAYQQAASQASTIAAGITAPLAPVGGRPLAVPLPGLATLHTSSSRGKXXXXXXXXXXXXGSSGPPAPASA 368
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig85.16601.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G5U8_ECTSI7.980e-8962.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig85contigE-siliculosus-1a_M_contig85:362111..363750 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig85.16601.1mRNA_E-siliculosus-1a_M_contig85.16601.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig85 362111..363750 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig85.16601.1 ID=prot_E-siliculosus-1a_M_contig85.16601.1|Name=mRNA_E-siliculosus-1a_M_contig85.16601.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=367bp
MSGRSTRSGASGAASSSRGRGRGRGGSSAGRGSGAAPAAAPAPAPAAPAP
AAAPAPAAAPAAAAAAAAAAAAASAPAPAAPPAPTPPPVALLQPNLAKAT
RSDYQSCERIFRGFGGRVSGSKTPLCSSHDAVLRMLGCYRFRSLIENNTA
AAMPGRARKWSSFPCWGFSFPPLLSKTTHMNPLLTPALASFRNEPGKDDW
YSFKPHVDAIIAKCVTLGLMTERSMLDDFVCRGNDLLLQFGVPEKVLRIF
TDLLPNARNISRETKLRDRSRLKAIIKISGGGKLAPTLATAHLSGYAGAY
QQAASQASTIAAGNTAPLAPVGGGPLTVPLPGLATQHTFSSRAKGRSKAR
APGGGRGSSGPPVPVSA
back to top