prot_E-siliculosus-1a_M_contig840.16573.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig840.16573.1
Unique Nameprot_E-siliculosus-1a_M_contig840.16573.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length72
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig840.16573.1 vs. uniprot
Match: D7G6P9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6P9_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 9.790e-25
Identity = 50/55 (90.91%), Postives = 54/55 (98.18%), Query Frame = 0 
Query:   18 PGATTVYAKIRERSMKFVMCASLEKECLVAAITANLERFSRLYDGEKRVVILAID 72
            PGA+TVYAKIRERSMKFV+CASLEK+CLVAAITANLERFSRLYDGE+RVVIL ID
Sbjct:   19 PGASTVYAKIRERSMKFVVCASLEKDCLVAAITANLERFSRLYDGERRVVILEID 73
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BLAST of mRNA_E-siliculosus-1a_M_contig840.16573.1 vs. uniprot
Match: D7FQM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM1_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 7.340e-20
Identity = 43/55 (78.18%), Postives = 47/55 (85.45%), Query Frame = 0 
Query:   18 PGATTVYAKIRERSMKFVMCASLEKECLVAAITANLERFSRLYDGEKRVVILAID 72
            PGATTVYAKIRERSMKF +CAS + ECL AAITANLERF  LY GEKRV+IL +D
Sbjct:   19 PGATTVYAKIRERSMKFALCASADVECLTAAITANLERFVSLYKGEKRVIILQMD 73
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig840.16573.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6P9_ECTSI9.790e-2590.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FQM1_ECTSI7.340e-2078.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig840contigE-siliculosus-1a_M_contig840:17..416 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig840.16573.1mRNA_E-siliculosus-1a_M_contig840.16573.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig840 17..416 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig840.16573.1 ID=prot_E-siliculosus-1a_M_contig840.16573.1|Name=mRNA_E-siliculosus-1a_M_contig840.16573.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=72bp
AARGTIGTACVAQSSRVPGATTVYAKIRERSMKFVMCASLEKECLVAAIT
ANLERFSRLYDGEKRVVILAID
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