prot_E-siliculosus-1a_M_contig84.16534.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig84.16534.1
Unique Nameprot_E-siliculosus-1a_M_contig84.16534.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length451
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig84.16534.1 vs. uniprot
Match: A0A6H5L7W1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W1_9PHAE)

HSP 1 Score: 744 bits (1920), Expect = 1.600e-268
Identity = 426/458 (93.01%), Postives = 438/458 (95.63%), Query Frame = 0 
Query:    1 MSRSGAIRSDGSSTXXXXXXXXXXXXXXXXXXXXX--------SCRRFSSTLGPVASSAVALLLALLSRNPRGADAQGFEYGDPIDVVVTAGDTLAMSFEGSLATAVAVSFQQCSGDVYMDMDVSFNGTSLVTSTAVETSKCVRVVGQSASADDSAIFYDNLCAFQNSGPVGQGYLEESAELSSTNVDPEYITAQFTNTGTVTASAQVVMFSTEYPAPNSDEAIDRVVAEFEQEGNIFTVDAEFQADGTEDENFCAGDNGCSLAAYYIEIDTESGDADRIFGTTCQATNGVLMYEGFTGVGDSTFSDTEVIGDDGETTTTDEVGVTDDEIAETTTDDAEAVLNGTGGARTRSRALSTTSFDVSACVGFPKNTGAVYRMYIVVSPDTDSYTRTGYGLQDQLMYASDQITVEEDDSDYECPEVVDEEEGSGARPRVVLTASRASTAVAAGLAVAAAAARA 450
            M+RSGAIRSDGS  XXXXXXXXXXXXXXXXXXXXX        SCRR SSTL P+ASSAVALLLALLSRNPRGADAQGFEYGDPIDVVVTAGDTLAMSFEG LATAVAVSFQQCSGDVYMDMDVSFNGTSLVTSTAVETSKCVRVVGQSASADDSAIFYDNLCAF+NSGPVGQGYLEESAELSST VDPEYITAQFTNTGT+TASAQVVMFSTEYPAPN+DEAIDRVVAE+EQEGNIFTVDAEFQADGTEDENFCAGD+GCSLAAYYIEIDTESGDADRIFGTTCQA+NGVL+YEGFTGVGDSTFSDTEVI DD ETT TDEVGVTDDEIAETTTDDAEAVLNGTGGARTRSRALSTTSFDV+ACV FPKNTGAVYRMYIVVSPDTDSYTRTG+G+QDQLMYASDQITVEEDDSDYECPEVVDEE GSGARPRVVLTASRASTAVAAGLAVA AAARA
Sbjct:    1 MARSGAIRSDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCRRISSTLRPMASSAVALLLALLSRNPRGADAQGFEYGDPIDVVVTAGDTLAMSFEGGLATAVAVSFQQCSGDVYMDMDVSFNGTSLVTSTAVETSKCVRVVGQSASADDSAIFYDNLCAFRNSGPVGQGYLEESAELSSTTVDPEYITAQFTNTGTITASAQVVMFSTEYPAPNADEAIDRVVAEYEQEGNIFTVDAEFQADGTEDENFCAGDDGCSLAAYYIEIDTESGDADRIFGTTCQASNGVLLYEGFTGVGDSTFSDTEVIDDDEETTATDEVGVTDDEIAETTTDDAEAVLNGTGGARTRSRALSTTSFDVTACVEFPKNTGAVYRMYIVVSPDTDSYTRTGFGVQDQLMYASDQITVEEDDSDYECPEVVDEEAGSGARPRVVLTASRASTAVAAGLAVATAAARA 458
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BLAST of mRNA_E-siliculosus-1a_M_contig84.16534.1 vs. uniprot
Match: D8LQ00_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ00_ECTSI)

HSP 1 Score: 666 bits (1718), Expect = 2.560e-239
Identity = 355/362 (98.07%), Postives = 357/362 (98.62%), Query Frame = 0 
Query:   89 MSFEGSLATAVAVSFQQCSGDVYMDMDVSFNGTSLVTSTAVETSKCVRVVGQSASADDSAIFYDNLCAFQNSGPVGQGYLEESAELSSTNVDPEYITAQFTNTGTVTASAQVVMFSTEYPAPNSDEAIDRVVAEFEQEGNIFTVDAEFQADGTEDENFCAGDNGCSLAAYYIEIDTESGDADRIFGTTCQATNGVLMYEGFTGVGDSTFSDTEVIGDDGETTTTDEVGVTDDEIAETTTDDAEAVLNGTGGARTRSRALSTTSFDVSACVGFPKNTGAVYRMYIVVSPDTDSYTRTGYGLQDQLMYASDQITVEEDDSDYECPEVVDEEEGSGARPRVVLTASRASTAVAAGLAVAAAAARA 450
            MSFEGSLATAVAVSFQQCSGDVYMDMDVSFNGTSLVTSTAVETSKCVRVVGQSASADDSAIFYDNLCAFQNSGPVGQGYLEESAELSSTNVDPEYITAQFTNTGTVTASAQVVMFSTEYPAPNSDEAIDRVVAEFEQEGNIFTVDAEFQADGTEDENFCAGDNGCSLAAYYIEIDTES DADRIFGTTCQATNGVL+YEGFTGVGDSTFSDTEVIGDDGETT TDEVGVTDDEIAETTTDD EAVLNG GGARTRSRALSTTSFDVSACV FPKNTGAVYRMYIVVSPDTDSYTRTGYGLQDQLMYASDQITVEEDDSDYECPEVV+EEEGSGARPRVVLTASRASTAVAAGLAVAAAAARA
Sbjct:    1 MSFEGSLATAVAVSFQQCSGDVYMDMDVSFNGTSLVTSTAVETSKCVRVVGQSASADDSAIFYDNLCAFQNSGPVGQGYLEESAELSSTNVDPEYITAQFTNTGTVTASAQVVMFSTEYPAPNSDEAIDRVVAEFEQEGNIFTVDAEFQADGTEDENFCAGDNGCSLAAYYIEIDTESDDADRIFGTTCQATNGVLLYEGFTGVGDSTFSDTEVIGDDGETTATDEVGVTDDEIAETTTDDTEAVLNGAGGARTRSRALSTTSFDVSACVEFPKNTGAVYRMYIVVSPDTDSYTRTGYGLQDQLMYASDQITVEEDDSDYECPEVVEEEEGSGARPRVVLTASRASTAVAAGLAVAAAAARA 362
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig84.16534.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L7W1_9PHAE1.600e-26893.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ00_ECTSI2.560e-23998.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 60..450
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..59
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig84contigE-siliculosus-1a_M_contig84:317801..328774 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig84.16534.1mRNA_E-siliculosus-1a_M_contig84.16534.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig84 317392..329289 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig84.16534.1 ID=prot_E-siliculosus-1a_M_contig84.16534.1|Name=mRNA_E-siliculosus-1a_M_contig84.16534.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=451bp
MSRSGAIRSDGSSTSTTTAAAAAAAARRPAAGRRRSCRRFSSTLGPVASS
AVALLLALLSRNPRGADAQGFEYGDPIDVVVTAGDTLAMSFEGSLATAVA
VSFQQCSGDVYMDMDVSFNGTSLVTSTAVETSKCVRVVGQSASADDSAIF
YDNLCAFQNSGPVGQGYLEESAELSSTNVDPEYITAQFTNTGTVTASAQV
VMFSTEYPAPNSDEAIDRVVAEFEQEGNIFTVDAEFQADGTEDENFCAGD
NGCSLAAYYIEIDTESGDADRIFGTTCQATNGVLMYEGFTGVGDSTFSDT
EVIGDDGETTTTDEVGVTDDEIAETTTDDAEAVLNGTGGARTRSRALSTT
SFDVSACVGFPKNTGAVYRMYIVVSPDTDSYTRTGYGLQDQLMYASDQIT
VEEDDSDYECPEVVDEEEGSGARPRVVLTASRASTAVAAGLAVAAAAARA
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