prot_E-siliculosus-1a_M_contig84.16531.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig84.16531.1
Unique Nameprot_E-siliculosus-1a_M_contig84.16531.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length632
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig84.16531.1 vs. uniprot
Match: A0A6H5JII0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JII0_9PHAE)

HSP 1 Score: 338 bits (868), Expect = 6.500e-106
Identity = 362/520 (69.62%), Postives = 370/520 (71.15%), Query Frame = 0
Query:   37 MKRACDGGSPCALCSRRGKVCERRLRRKSGPAKGAKYAPRRRKFDSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------VRRIQXXXXXXXXXXXXXXXXXXXXXXLTXPATAMATPPPAGRPPVLKTEEAASPSQPQPQPQQLNQ--------ELWSKRGRGEKRGSSCSDXXXXXXXXXXXSAESPSWSRGVPRKRRFPSKGWARAAGRGGDERAPASPSGDSCGRTWQVSGGDERESGGVGVGVCGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPVSCYNSGPAEDLRPSNGGSCPYSPKVVARVPRRDEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSPAAVAGEAVEQGGRRCRPSYPKEEVPDDMDYTDGRVVSVSPLKKAVTGEGGDEEGPDHRGG 536
            MKRACDGGSPCALCSRRGKVCERRLRRKSGPAKGAKYAPRRRKFDSEAXXXXXXXXXXXXXXXXXXX                                  XXXXXXXXXXXXXXXXXXXXXXX            VRRIQ    XXXXXXXXXXXXXXXXXX  X     A     GRPPVLKTEEA S SQPQ                E W K GRGEKRGSSCSD           SAESPSWSRGVPRKRRFPSKGWARAAGRGGDERAPASPSGD+CGRTWQ SGG+ER SGGVGVG CGG               XXXXXXXXXXXXXXXXX       APVSCYN+ PAEDLRP+ GGS PYSPK VARVPRR+EGA XXXXXX             XXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        RSPAAVAG+AVEQ GRRCRPSYPK+EV DDMDYT GRVVSVSPLKKAVT EGGDEEGPDH+GG
Sbjct:    1 MKRACDGGSPCALCSRRGKVCERRLRRKSGPAKGAKYAPRRRKFDSEAXXXXXXXXXXXXXXXXXXXSLKDKERNRGGFNKCGGGGGRYGDALGSSGVSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLATKPVRRIQGSKRXXXXXXXXXXXXXXXXXXXXXXXXXXA-----GRPPVLKTEEAPSTSQPQXXXXXXXXXXXXXXXXEHWRKPGRGEKRGSSCSDDRSSTSSTSGGSAESPSWSRGVPRKRRFPSKGWARAAGRGGDERAPASPSGDTCGRTWQTSGGEERASGGVGVGACGGGREVGRESSRRNGSSXXXXXXXXXXXXXXXXXAAAA---APVSCYNNVPAEDLRPTAGGSRPYSPKDVARVPRREEGAXXXXXXXRGVSQRNQSVDRHXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------RSPAAVAGKAVEQAGRRCRPSYPKQEVRDDMDYTAGRVVSVSPLKKAVTREGGDEEGPDHQGG 504          
BLAST of mRNA_E-siliculosus-1a_M_contig84.16531.1 vs. uniprot
Match: A0A6H5L009_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L009_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 9.900e-14
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 0
Query:   27 LRKSCDYCARMKRACDGGSPCALCSRRGKVCERRLRRKSGPAKGAKYAPRRRK 79
            LRKSCDYC R+KRACDG +PC+LC+RR K C R  R+KSGPAKG KYAPRR++
Sbjct:   10 LRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKR 62          
BLAST of mRNA_E-siliculosus-1a_M_contig84.16531.1 vs. uniprot
Match: D7FPF9_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF9_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 9.960e-14
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 0
Query:   27 LRKSCDYCARMKRACDGGSPCALCSRRGKVCERRLRRKSGPAKGAKYAPRRRK 79
            LRKSCDYC R+KRACDG +PC+LC+RR K C R  R+KSGPAKG KYAPRR++
Sbjct:   18 LRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKR 70          
BLAST of mRNA_E-siliculosus-1a_M_contig84.16531.1 vs. uniprot
Match: D8LKM5_ECTSI (Zinc finger transcriptional regulator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM5_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 5.870e-12
Identity = 34/51 (66.67%), Postives = 41/51 (80.39%), Query Frame = 0
Query:   27 LRKSCDYCARMKRACDGGSPCALCSRRGKVCERRLRRKSGPAKGAKYAPRR 77
            LRKSCDYC RMKR C GG+PCALC+RR K C R ++++SGPAKG KY  R+
Sbjct:   23 LRKSCDYCVRMKRGCSGGTPCALCNRRNKNCIRSIKKRSGPAKGTKYCKRK 73          
BLAST of mRNA_E-siliculosus-1a_M_contig84.16531.1 vs. uniprot
Match: A0A6H5L7F3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F3_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 5.530e-11
Identity = 35/51 (68.63%), Postives = 39/51 (76.47%), Query Frame = 0
Query:   27 LRKSCDYCARMKRACDGGSPCALCSRRGKVCERRLRRKSGPAKGAKYAPRR 77
            LRKSCD C R+KRACDG SPC LC RR + C R ++RKSGPAKG KY  RR
Sbjct:   34 LRKSCDLCVRLKRACDGQSPCQLCLRRRETCTRSVKRKSGPAKGTKYTTRR 84          
BLAST of mRNA_E-siliculosus-1a_M_contig84.16531.1 vs. uniprot
Match: D8LPZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ9_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 1.370e-10
Identity = 34/56 (60.71%), Postives = 42/56 (75.00%), Query Frame = 0
Query:   27 LRKSCDYCARMKRACDGGSPCALCSRRGKVCERRLRRKSGPAKGAKYAPRRRKFDS 82
            LRKSCD C R+KRACDG +PC LC RR + C R ++RKSGPAKG KY  RR + ++
Sbjct:   62 LRKSCDLCVRLKRACDGKNPCHLCLRRRETCTRSVKRKSGPAKGTKYTTRRSRMEA 117          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig84.16531.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JII0_9PHAE6.500e-10669.62Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L009_9PHAE9.900e-1471.70Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7FPF9_ECTSI9.960e-1471.70Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LKM5_ECTSI5.870e-1266.67Zinc finger transcriptional regulator n=1 Tax=Ecto... [more]
A0A6H5L7F3_9PHAE5.530e-1168.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPZ9_ECTSI1.370e-1060.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 624..632
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS00463ZN2_CY6_FUNGAL_1coord: 30..57
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 24..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig84contigE-siliculosus-1a_M_contig84:296710..299599 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig84.16531.1mRNA_E-siliculosus-1a_M_contig84.16531.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig84 296710..299600 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig84.16531.1 ID=prot_E-siliculosus-1a_M_contig84.16531.1|Name=mRNA_E-siliculosus-1a_M_contig84.16531.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=632bp
QGKSGREEHGHEQPQQQQQRQQQQPGLRKSCDYCARMKRACDGGSPCALC
SRRGKVCERRLRRKSGPAKGAKYAPRRRKFDSEAAALAEEEAAAAAEAAA
TVASLKDKERNRGGFNTCGGGGGGGGYGDALDSSGVSRSSGGGGSCGGGA
AAAVAVAMKPVRRIQARKTREENDRPPSGGGGSPSATLTSPATAMATPPP
AGRPPVLKTEEAASPSQPQPQPQQLNQELWSKRGRGEKRGSSCSDDSSTT
TTSSGGSAESPSWSRGVPRKRRFPSKGWARAAGRGGDERAPASPSGDSCG
RTWQVSGGDERESGGVGVGVCGGGGGEVGRESSRRNGSSSSSSSSSSGGS
SEAPCYSAAAAAAPVSCYNSGPAEDLRPSNGGSCPYSPKVVARVPRRDEG
AEEEEEEEEAGGVSQRSRYVDRHHPPERQASRGGDVETTTRSPSSGTGWT
AAAAAAAAAAAAAAAAAATRTTTRSPAAVAGEAVEQGGRRCRPSYPKEEV
PDDMDYTDGRVVSVSPLKKAVTGEGGDEEGPDHRGGGRGREKYVGGFFAA
PGASVGANRGGGRDRFGGGVVCGAGGGSQEPVDWKPAPEGTATAGPQRPA
AHASPQQRRLLRLRRRREERQHSSDAHERRRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036864Zn2-C6_fun-type_DNA-bd_sf
IPR001138Zn2-C6_fun-type_DNA-bd