prot_E-siliculosus-1a_M_contig84.16516.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig84.16516.1
Unique Nameprot_E-siliculosus-1a_M_contig84.16516.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length254
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig84.16516.1 vs. uniprot
Match: F4NSK2_BATDJ (Uncharacterized protein (Fragment) n=1 Tax=Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) TaxID=684364 RepID=F4NSK2_BATDJ)

HSP 1 Score: 92.4 bits (228), Expect = 4.610e-19
Identity = 52/139 (37.41%), Postives = 64/139 (46.04%), Query Frame = 0 
Query:   44 TFCPDEQCCSVWGFCGVTSEHCGEGCQPEFGGCDDGGSSP-------TPAPVQADDXXXXXXXXXXXXXXXXXXVTVTDDASEGICGVVDATETFDXXXXXCPDEQCCSVWGFCGATSEYCGEGCQPEFGACDDDTRSP 175
            T CP   CCS +GFCG TS+HCG GCQ ++G C DG   P        PAP    D                         ++G CG    T         CPD  CCS +GFCG TS++CG GCQ ++G C D  + P
Sbjct:  110 TRCPYNTCCSKYGFCGETSDHCGNGCQKDYGICWDGDKPPKSSAQPKAPAPAPKADYPI---------------------GADGQCGEGSGTR--------CPDRTCCSKYGFCGETSDHCGVGCQKDYGICWDGDKPP 219
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BLAST of mRNA_E-siliculosus-1a_M_contig84.16516.1 vs. uniprot
Match: A0A0F8CN71_CERFI (Chitinase n=1 Tax=Ceratocystis fimbriata f. sp. platani TaxID=88771 RepID=A0A0F8CN71_CERFI)

HSP 1 Score: 94.7 bits (234), Expect = 2.070e-18
Identity = 54/143 (37.76%), Postives = 61/143 (42.66%), Query Frame = 0 
Query:   32 PGGECGVVDVTDTFCPDEQCCSVWGFCGVTSEHCGEGCQPEFGGCDDGGSSPTPAPVQADDXXXXXXXXXXXXXXXXXXVTVTDDASEGICGVVDATETFDXXXXXCPDEQCCSVWGFCGATSEYCGEGCQPEFGACDDDTRS 174
            P G CG    T   C +  CCS WG+CG TSE+CG GCQ  FG CD       P  V+A                          + +G CG              C    CCS WG+CG TSEYCG GCQ  FG CD D  S
Sbjct:  496 PNGSCG--GKTGYTCTNSNCCSKWGWCGGTSEYCGAGCQTGFGLCDSDAPKEAPKEVEAPKTAELAL------------------SPDGSCG--------GKTGYTCTGSNCCSKWGWCGGTSEYCGAGCQTGFGRCDSDATS 610
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BLAST of mRNA_E-siliculosus-1a_M_contig84.16516.1 vs. uniprot
Match: A0A0F8BQ26_CERFI (Chitinase n=1 Tax=Ceratocystis fimbriata f. sp. platani TaxID=88771 RepID=A0A0F8BQ26_CERFI)

HSP 1 Score: 93.6 bits (231), Expect = 4.910e-18
Identity = 57/155 (36.77%), Postives = 67/155 (43.23%), Query Frame = 0 
Query:   24 DRSLAVALPGGECGVVDVTDTFCPDEQCCSVWGFCGVTSEHCGEGCQPEFGGCDDGGSSPTPAPVQADDXXXXXXXXXXXXXXXXXXVTVT---DDASEGICGVVDATETFDXXXXXCPDEQCCSVWGFCGATSEYCGEGCQPEFGACDDDTRSP 175
            DRS  V  P  +CG    T   C ++ CCS WGFCG T +HC  GCQP+FG C        P   +  D                  V  T     + +G CG              C    CCS  G+CGATS+YCG GCQ  FG CD D  SP
Sbjct:  334 DRSKLVLSPNTKCG--GSTGYTCGEKSCCSQWGFCGNTPDHCATGCQPDFGHC-----GAFPESNEVSDKATTEKVSGTSEASKEDEVPKTAKLTPSPDGSCG--------SKTGFTCTGNNCCSQSGWCGATSDYCGTGCQTGFGLCDSDATSP 473
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BLAST of mRNA_E-siliculosus-1a_M_contig84.16516.1 vs. uniprot
Match: A0A1Y3N1X5_PIRSE (Carbohydrate-binding module family 18 protein (Fragment) n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3N1X5_PIRSE)

HSP 1 Score: 88.2 bits (217), Expect = 5.530e-18
Identity = 48/126 (38.10%), Postives = 59/126 (46.83%), Query Frame = 0 
Query:   43 DTFCPDEQCCSVWGFCGVTSEHCGEGCQPEFGGCDDGGSSPTPAPVQADDXXXXXXXXXXXXXXXXXXVTVTDDASEGICGVVDATETFDXXXXXCPDEQCCSVWGFCGATSEYCGEGCQPEFGAC 168
            +T CPD +CCS +G+CG +S HC  GCQ EFG C  G S PT                                ++ G CG        D     CP+ QCCS +G+CG   +YCG GCQ EFGAC
Sbjct:   84 NTSCPDGKCCSKYGWCGTSSSHCDAGCQSEFGVCY-GASHPT--------------------------------STNGKCGA-------DNGNTSCPNNQCCSKYGWCGTDDQYCGTGCQAEFGAC 169
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BLAST of mRNA_E-siliculosus-1a_M_contig84.16516.1 vs. uniprot
Match: A0A1Y1UX90_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1UX90_9FUNG)

HSP 1 Score: 89.7 bits (221), Expect = 7.950e-18
Identity = 52/146 (35.62%), Postives = 64/146 (43.84%), Query Frame = 0 
Query:   35 ECGVVDVTDTFCPDEQCCSVWGFCGVTSEHCGEGCQPEFGGCDDGGSSPTPAPVQADDXXXXXXXXXXXXXXXXXXVTVTD------DASEGICGVVDATETF------DXXXXXCPDEQCCSVWGFCGATSEYCGEGCQPEFGAC 168
            +CG     D  CP+ QCCS  G+CG TS +CG GCQ EFG CD G +  T                           T +        +  G C  V  T T       +     CP+ QCCS +G+CG TS+YCG GCQ  FG C
Sbjct:  104 KCGRKGSVDYICPNSQCCSQKGYCGTTSAYCGVGCQSEFGRCDSGKAISTDTKCGRKGSVDYICPNSQCCSQKGYCGTTSAYCGVGCQSEFGKCNSVKVTSTDYTCGRKNNVDYICPNSQCCSKYGYCGTTSDYCGTGCQSGFGKC 249
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BLAST of mRNA_E-siliculosus-1a_M_contig84.16516.1 vs. uniprot
Match: A0A0G4J3H8_PLABS (Uncharacterized protein (Fragment) n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J3H8_PLABS)

HSP 1 Score: 89.0 bits (219), Expect = 1.190e-17
Identity = 63/148 (42.57%), Postives = 74/148 (50.00%), Query Frame = 0 
Query:   32 PGGECGVVDVTDTFCPDEQCCSVWGFCGVTSEHCGEGCQPEFGGCDDGGSSPTPAPVQADDXXXXXXXXXXXXXXXXXXVTVTDDASEGICGVVDATETFDXXXXXCPDEQCCSVWGFCGATSEYCGEGCQPEFGACDDDTRSPTPAP 179
            P G CG + V +  C    CCS++G+CG T  +CG GCQ  FG C+      T AP     XXXXXXX            TVTD      CG   A  T       C D QCCS +G+CG T++YCG GCQ  FGAC       TPAP
Sbjct:   67 PNGRCGPL-VGNARCRPGYCCSIFGYCGTTPSYCGLGCQASFGVCNASPDGQTAAPTPXXXXXXXXXXG-----------TVTD------CGATGAGRT-------CRDAQCCSQFGYCGTTAQYCGPGCQSGFGACQ------TPAP 183
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig84.16516.1 vs. uniprot
Match: A0A0F8AWC4_CERFI (Chitinase n=1 Tax=Ceratocystis fimbriata f. sp. platani TaxID=88771 RepID=A0A0F8AWC4_CERFI)

HSP 1 Score: 92.4 bits (228), Expect = 1.230e-17
Identity = 53/142 (37.32%), Postives = 59/142 (41.55%), Query Frame = 0 
Query:   33 GGECGVVDVTDTFCPDEQCCSVWGFCGVTSEHCGEGCQPEFGGCDDGGSSPTPAPVQADDXXXXXXXXXXXXXXXXXXVTVTDDASEGICGVVDATETFDXXXXXCPDEQCCSVWGFCGATSEYCGEGCQPEFGACDDDTRS 174
            GGE G        C +  CCS WG+CGVT  HCG GCQ  FG CD       P  V+A                          + +G CG              C    CCS WG+CG TSEYCG GCQ  FG CD D  S
Sbjct:  427 GGETGYT------CGESNCCSKWGWCGVTPGHCGSGCQTGFGLCDSDAPKEAPKEVEAPKTAELAP------------------SPDGSCG--------GKTGYTCTGSNCCSKWGWCGGTSEYCGAGCQTGFGLCDSDVTS 536
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig84.16516.1 vs. uniprot
Match: A0A1Y1WU21_9FUNG (Glycoside hydrolase/deacetylase (Fragment) n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1WU21_9FUNG)

HSP 1 Score: 88.6 bits (218), Expect = 1.100e-16
Identity = 50/119 (42.02%), Postives = 59/119 (49.58%), Query Frame = 0 
Query:   51 CCSVWGFCGVTSEHCGEGCQPEFGGCDDGGSSPTPAPVQADDXXXXXXXXXXXXXXXXXXVTVTDDAS-EGICGVVDATETFDXXXXXCPDEQCCSVWGFCGATSEYCGEGCQPEFGAC 168
            CCS +G+CG TSE+CG GCQ  FG CDDG S+ T  P                        T T   S  G CG        D     CPD+ CCS +G+CG +SE+CG GCQ EFG C
Sbjct:    1 CCSQYGYCGKTSEYCGTGCQSGFGKCDDGKSTTTTTPK-----------------------TPTGKISTNGRCGK-------DNGNTVCPDDLCCSQYGYCGESSEHCGTGCQSEFGQC 89
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig84.16516.1 vs. uniprot
Match: A0A1Y2CZ43_9FUNG (Uncharacterized protein n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2CZ43_9FUNG)

HSP 1 Score: 85.5 bits (210), Expect = 1.670e-16
Identity = 45/128 (35.16%), Postives = 58/128 (45.31%), Query Frame = 0 
Query:   42 TDTFCPDEQCCSVWGFCGVTSEHCGEGCQPEFGGCDDGGSSPTPAPVQADDXXXXXXXXXXXXXXXXXXVTVTDDASEGICGVVDATETFDXXXXXCPDEQCCSVWGFCGATSEYCGEGCQPEFGACD 169
            T   C D QCCS +G+CG ++ +CG+GCQ EFG C +  S       +                            S+  CGV +           C  +QCCS +G+CG T EYCG GCQ EFG CD
Sbjct:  115 TILICQDHQCCSKYGYCGTSNSYCGQGCQSEFGTCSNSNSGKKEQKKKYSSPALAIIY------------------SDTFCGVKE------DGIYRCDGQQCCSPYGYCGTTKEYCGRGCQIEFGRCD 218
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig84.16516.1 vs. uniprot
Match: A0A1Y1V122_9FUNG (Uncharacterized protein n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1V122_9FUNG)

HSP 1 Score: 88.6 bits (218), Expect = 1.690e-16
Identity = 62/123 (50.41%), Postives = 78/123 (63.41%), Query Frame = 0 
Query:   46 CPDEQCCSVWGFCGVTSEHCGEGCQPEFGGCDDGGSSPTPAPVQADDXXXXXXXXXXXXXXXXXXVTVTDDASEGICGVVDATETFDXXXXXCPDEQCCSVWGFCGATSEYCGEGCQPEFGAC 168
            CPD +CCS +G+CG +S++CG GC PEFG C++     T   ++   XXXXXXXXXXXXXXXXXX++     + G CGV       D     CPD  CCS + +CG T E+CG GCQ EFG C
Sbjct:  231 CPDNECCSKYGYCGTSSDYCGSGCNPEFGRCNNSNGKTTTT-IKXXXXXXXXXXXXXXXXXXXXXIS-----TNGRCGV-------DFKNSICPDSLCCSQYSYCGDTEEHCGTGCQSEFGKC 340
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig84.16516.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F4NSK2_BATDJ4.610e-1937.41Uncharacterized protein (Fragment) n=1 Tax=Batrach... [more]
A0A0F8CN71_CERFI2.070e-1837.76Chitinase n=1 Tax=Ceratocystis fimbriata f. sp. pl... [more]
A0A0F8BQ26_CERFI4.910e-1836.77Chitinase n=1 Tax=Ceratocystis fimbriata f. sp. pl... [more]
A0A1Y3N1X5_PIRSE5.530e-1838.10Carbohydrate-binding module family 18 protein (Fra... [more]
A0A1Y1UX90_9FUNG7.950e-1835.62Uncharacterized protein (Fragment) n=1 Tax=Piromyc... [more]
A0A0G4J3H8_PLABS1.190e-1742.57Uncharacterized protein (Fragment) n=1 Tax=Plasmod... [more]
A0A0F8AWC4_CERFI1.230e-1737.32Chitinase n=1 Tax=Ceratocystis fimbriata f. sp. pl... [more]
A0A1Y1WU21_9FUNG1.100e-1642.02Glycoside hydrolase/deacetylase (Fragment) n=1 Tax... [more]
A0A1Y2CZ43_9FUNG1.670e-1635.16Uncharacterized protein n=1 Tax=Neocallimastix cal... [more]
A0A1Y1V122_9FUNG1.690e-1650.41Uncharacterized protein n=1 Tax=Anaeromyces robust... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001002Chitin-binding, type 1SMARTSM00270ChitinBD_3coord: 121..164
e-value: 4.7E-10
score: 49.4
coord: 35..72
e-value: 3.3E-12
score: 56.5
IPR001002Chitin-binding, type 1PFAMPF00187Chitin_bind_1coord: 35..70
e-value: 1.7E-10
score: 41.2
coord: 133..162
e-value: 3.9E-9
score: 36.8
IPR001002Chitin-binding, type 1PROSITEPS50941CHIT_BIND_I_2coord: 119..170
score: 9.165
IPR001002Chitin-binding, type 1PROSITEPS50941CHIT_BIND_I_2coord: 33..78
score: 9.21
IPR036861Endochitinase-like superfamilyGENE3D3.30.60.10coord: 131..178
e-value: 3.8E-12
score: 47.8
IPR036861Endochitinase-like superfamilyGENE3D3.30.60.10coord: 34..75
e-value: 5.2E-11
score: 44.5
IPR036861Endochitinase-like superfamilySUPERFAMILY57016Plant lectins/antimicrobial peptidescoord: 132..175
IPR036861Endochitinase-like superfamilySUPERFAMILY57016Plant lectins/antimicrobial peptidescoord: 40..79
NoneNo IPR availablePANTHERPTHR47849:SF3coord: 135..171
coord: 44..171
NoneNo IPR availablePANTHERPTHR47849FAMILY NOT NAMEDcoord: 135..171
coord: 44..171
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..210
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 236..253
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 211..235
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePRODOMPD000609coord: 133..164
e-value: 4.0E-4
score: 103.0
coord: 39..72
e-value: 7.0E-4
score: 102.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.812
NoneNo IPR availableTMHMMTMhelixcoord: 213..235
IPR018371Chitin-binding, type 1, conserved sitePROSITEPS00026CHIT_BIND_I_1coord: 138..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig84contigE-siliculosus-1a_M_contig84:39480..41066 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig84.16516.1mRNA_E-siliculosus-1a_M_contig84.16516.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig84 27734..41220 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig84.16516.1 ID=prot_E-siliculosus-1a_M_contig84.16516.1|Name=mRNA_E-siliculosus-1a_M_contig84.16516.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=254bp
MTSKMLYLFGGMFLCYLLGGVQGDRSLAVALPGGECGVVDVTDTFCPDEQ
CCSVWGFCGVTSEHCGEGCQPEFGGCDDGGSSPTPAPVQADDPTPAPVQA
VDPTPSPVTEVTVTDDASEGICGVVDATETFDATETFCPDEQCCSVWGFC
GATSEYCGEGCQPEFGACDDDTRSPTPAPVNEGQNDGATPSPLDGTASDG
EDSDDSALLDAAWEVAVAVVASAVFAAGAGCMALACRRRRAENEREGRPL
VLA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018371Chitin-binding_1_CS
IPR036861Endochitinase-like_sf
IPR001002Chitin-bd_1