prot_E-siliculosus-1a_M_contig835.16515.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig835.16515.1
Unique Nameprot_E-siliculosus-1a_M_contig835.16515.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length103
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig835.16515.1 vs. uniprot
Match: D7FPI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI0_ECTSI)

HSP 1 Score: 171 bits (434), Expect = 5.780e-52
Identity = 89/104 (85.58%), Postives = 94/104 (90.38%), Query Frame = 0
Query:    1 GATKGKRIQDQLEKAGVFRTLGATKPHRVWWLAFRRKDAIRPRFEDRGEDNLCVPDGSGAEENVGTLRDTNPAVGATTAQEGG--STVTPDEEQEQELPEETKR 102
            GATKGKRIQDQLEKAGVFR+ G TKPHRVWWLAFR KDA RPR EDRGEDNLCVP GSGAEE+ GT RDTNPAVGATTAQEGG  STVTPDE++EQELPE+TKR
Sbjct:   67 GATKGKRIQDQLEKAGVFRSQGDTKPHRVWWLAFRGKDATRPRLEDRGEDNLCVPAGSGAEEHRGTPRDTNPAVGATTAQEGGGSSTVTPDEQEEQELPEKTKR 170          
BLAST of mRNA_E-siliculosus-1a_M_contig835.16515.1 vs. uniprot
Match: D8LNQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ4_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 5.540e-40
Identity = 72/81 (88.89%), Postives = 74/81 (91.36%), Query Frame = 0
Query:    1 GATKGKRIQDQLEKAGVFRTLGATKPHRVWWLAFRRKDAIRPRFEDRGEDNLCVPDGSGAEENVGTLRDTNPAVGATTAQE 81
            GATKGKRIQDQLEKAGVFR+ G TKPHRVWWLAFR KDA RPRFEDRGEDNLCVP GSGAEE+ GT RDTNPAVGATTAQE
Sbjct:   67 GATKGKRIQDQLEKAGVFRSQGDTKPHRVWWLAFRGKDATRPRFEDRGEDNLCVPAGSGAEEHRGTPRDTNPAVGATTAQE 147          
BLAST of mRNA_E-siliculosus-1a_M_contig835.16515.1 vs. uniprot
Match: A0A6H5KB44_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB44_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 5.440e-36
Identity = 63/82 (76.83%), Postives = 68/82 (82.93%), Query Frame = 0
Query:    2 ATKGKRIQDQLEKAGVFRTLGATKPHRVWWLAFRRKDAIRPRFEDRGEDNLCVPDGSGAEENVGTLRDTNPAVGATTAQEGG 83
            AT G+R+ D+LE+AGVFR LG      VWWLAF  KDA RPRFEDRGEDNLC P GSGAEE+VGTLRDTNPAVGATTAQEGG
Sbjct:   10 ATNGRRVLDRLEEAGVFRWLGTNSLRSVWWLAFTGKDATRPRFEDRGEDNLCEPAGSGAEEHVGTLRDTNPAVGATTAQEGG 91          
BLAST of mRNA_E-siliculosus-1a_M_contig835.16515.1 vs. uniprot
Match: A0A6H5K0V0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0V0_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 3.060e-29
Identity = 66/104 (63.46%), Postives = 76/104 (73.08%), Query Frame = 0
Query:    1 GATKGKRIQ-DQLEKAGVFRTLGATKPHRVWWLAFRRKDAIRPRFEDRGEDNLCVPDGSGAEENVGTLRDTNPAVGATTAQEGGSTVTPDEEQEQELPEETKRR 103
            GATKG+R+  ++LE+AGVFR LG   P RVWWLA+R KDA RPRFEDRGEDNLC P GSGAEE+VGT R           Q G   +TPDE+QE+ELPE TKRR
Sbjct:    9 GATKGRRVLINRLEEAGVFRWLGTNSPRRVWWLAYRGKDATRPRFEDRGEDNLCEPAGSGAEEHVGTER----------YQPG---LTPDEQQEEELPENTKRR 99          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig835.16515.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FPI0_ECTSI5.780e-5285.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNQ4_ECTSI5.540e-4088.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KB44_9PHAE5.440e-3676.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0V0_9PHAE3.060e-2963.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig835contigE-siliculosus-1a_M_contig835:2731..3039 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig835.16515.1mRNA_E-siliculosus-1a_M_contig835.16515.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig835 2731..3039 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig835.16515.1 ID=prot_E-siliculosus-1a_M_contig835.16515.1|Name=mRNA_E-siliculosus-1a_M_contig835.16515.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=103bp
GATKGKRIQDQLEKAGVFRTLGATKPHRVWWLAFRRKDAIRPRFEDRGED
NLCVPDGSGAEENVGTLRDTNPAVGATTAQEGGSTVTPDEEQEQELPEET
KRR
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