prot_E-siliculosus-1a_M_contig83.16513.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig83.16513.1
Unique Nameprot_E-siliculosus-1a_M_contig83.16513.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length93
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig83.16513.1 vs. uniprot
Match: D7G4Z5_ECTSI (Dynein light chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4Z5_ECTSI)

HSP 1 Score: 188 bits (478), Expect = 1.040e-60
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
Query:    1 MESSGVSAKMVSDMDDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 92
            MESSGVSAKMVSDMDDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG
Sbjct:    1 MESSGVSAKMVSDMDDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 92          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16513.1 vs. uniprot
Match: A0A835YST4_9STRA (Dynein light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YST4_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.810e-43
Identity = 68/92 (73.91%), Postives = 79/92 (85.87%), Query Frame = 0
Query:    1 MESSGVSAKMVSDMDDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 92
            ME+SG S+ +VSDMDDH EMR DAQ WAAAAIES ++EK IS+ IK + + KYGPTWHCIVGTDFKA+VTHE+K F+FFYHGKMA CLYKAG
Sbjct:    1 MENSGASSSVVSDMDDHSEMRTDAQAWAAAAIESHAEEKAISKDIKGRMDDKYGPTWHCIVGTDFKAYVTHETKTFMFFYHGKMAICLYKAG 92          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16513.1 vs. uniprot
Match: A0A7S2V5R3_9STRA (Dynein light chain (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5R3_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.550e-38
Identity = 65/93 (69.89%), Postives = 77/93 (82.80%), Query Frame = 0
Query:    1 MESSGVS-AKMVSDMDDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 92
            MES G    K+V DMD+HGEM+ DA+N AAAA+E   +EK+ISR IK+ F+ KYGPTWHCIVGTDF+AFVTHESKHF+FFY GK+A CLYKAG
Sbjct:   39 MESRGSGEGKLVCDMDEHGEMKNDAKNVAAAAVEQHQEEKDISRHIKAHFDQKYGPTWHCIVGTDFRAFVTHESKHFIFFYIGKIAICLYKAG 131          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16513.1 vs. uniprot
Match: A0A7S2CIH5_9STRA (Dynein light chain n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CIH5_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.550e-35
Identity = 59/86 (68.60%), Postives = 70/86 (81.40%), Query Frame = 0
Query:    7 SAKMVSDMDDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 92
            S+K+V DMD+HGEM+ DA   A  AIE  ++EK IS +IKS F+ KYGPTWHCIVG+DF+AFVTHESKHF+FFY GK A CLYKAG
Sbjct:   31 SSKIVCDMDEHGEMKADAHTVAGEAIEKFTEEKAISTSIKSFFDAKYGPTWHCIVGSDFRAFVTHESKHFIFFYIGKTAICLYKAG 116          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16513.1 vs. uniprot
Match: A0A7S0SUZ6_9STRA (Dynein light chain n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SUZ6_9STRA)

HSP 1 Score: 119 bits (298), Expect = 3.860e-33
Identity = 59/92 (64.13%), Postives = 73/92 (79.35%), Query Frame = 0
Query:    3 SSGVSAKMVSDMDDHG---EMRVDAQNWAAAAIESKSDEKEISRAIKSKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKA 91
            SSG  +KMV DM+DHG   EM+ DA + A+ A+E+  +EK+ISR IKS F+ KYGPTWHCIVG+DF+AFVT+ESKHF+FFY GK A CLYK 
Sbjct:   10 SSGPHSKMVCDMEDHGIHGEMKNDALSVASTALEANQEEKDISRHIKSFFDQKYGPTWHCIVGSDFRAFVTYESKHFIFFYIGKTAICLYKT 101          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16513.1 vs. uniprot
Match: F0XW00_AURAN (Dynein light chain (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XW00_AURAN)

HSP 1 Score: 108 bits (271), Expect = 2.580e-29
Identity = 49/78 (62.82%), Postives = 61/78 (78.21%), Query Frame = 0
Query:   15 DDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 92
            D+HGEM+ +  N AA AIE    E E+S+ IK+ F+ KYGPTWHCIVG+DF+A+VTHESK+F+FFY GK A CLYK G
Sbjct:    1 DEHGEMKQEVYNLAAYAIEQYVTEMEVSKHIKAHFDQKYGPTWHCIVGSDFRAYVTHESKNFIFFYQGKTAICLYKCG 78          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16513.1 vs. uniprot
Match: A0A482SJR4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJR4_9ARCH)

HSP 1 Score: 105 bits (261), Expect = 7.300e-28
Identity = 47/72 (65.28%), Postives = 60/72 (83.33%), Query Frame = 0
Query:   20 MRVDAQNWAAAAIESKSDEKEISRAIKSKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKA 91
            M+ DA    AAA+E+ ++EK+IS+ +K+ F+ KYGPTWHCIVG+DF+AFVTHESKHF+FFY GK A CLYKA
Sbjct:    1 MKHDAFTVVAAALETNTEEKDISKHVKTYFDQKYGPTWHCIVGSDFRAFVTHESKHFIFFYIGKTAICLYKA 72          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16513.1 vs. uniprot
Match: A0A8J2SHI5_9STRA ([Phosphatase 2A protein]-leucine-carboxy methyltransferase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SHI5_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.220e-25
Identity = 49/79 (62.03%), Postives = 61/79 (77.22%), Query Frame = 0
Query:   14 MDDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 92
            +D+HGEM+ +A N AA A+E    E EIS+ IK++F+ KYGPTWHCIVG+DFK   THE+KHF+FFYHGK A  LYK G
Sbjct:  300 VDEHGEMKQEAYNLAAYAVEQFVTEMEISKHIKAQFDEKYGPTWHCIVGSDFKLQCTHEAKHFIFFYHGKTAVALYKCG 378          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16513.1 vs. uniprot
Match: A0A7S1YV50_9STRA (Dynein light chain n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YV50_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.300e-25
Identity = 49/84 (58.33%), Postives = 60/84 (71.43%), Query Frame = 0
Query:    9 KMVSDMDDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 92
            K + DMD+H EM+ DA + A  AIES   EK+ +  IK  F+ KYGPTWH IVG+DFKA+ THE+K F FFY GK A C+YKAG
Sbjct:   36 KQICDMDEHSEMKSDAISVATNAIESHIQEKDQANHIKRAFDAKYGPTWHVIVGSDFKAYGTHEAKTFFFFYVGKAAICMYKAG 119          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16513.1 vs. uniprot
Match: A0A0R3UCN8_MESCO (Dynein light chain n=1 Tax=Mesocestoides corti TaxID=53468 RepID=A0A0R3UCN8_MESCO)

HSP 1 Score: 94.0 bits (232), Expect = 4.380e-23
Identity = 48/91 (52.75%), Postives = 69/91 (75.82%), Query Frame = 0
Query:    5 GVSAKMV---SDMDDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 92
            G S K V   +DM D  EM+ DA + A+ A+++++ EK+I+ AIK KF+ KYGPTWHCIVG +F ++VTHESKHF++FY G++A  L+K+G
Sbjct:   14 GQSQKAVVKNADMSD--EMQHDAVDCASEAMQNQTIEKDIAAAIKKKFDSKYGPTWHCIVGRNFGSYVTHESKHFIYFYMGQVAILLFKSG 102          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig83.16513.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4Z5_ECTSI1.040e-60100.00Dynein light chain n=2 Tax=Ectocarpus TaxID=2879 R... [more]
A0A835YST4_9STRA1.810e-4373.91Dynein light chain n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7S2V5R3_9STRA1.550e-3869.89Dynein light chain (Fragment) n=1 Tax=Fibrocapsa j... [more]
A0A7S2CIH5_9STRA1.550e-3568.60Dynein light chain n=1 Tax=Florenciella parvula Ta... [more]
A0A7S0SUZ6_9STRA3.860e-3364.13Dynein light chain n=1 Tax=Chromulina nebulosa Tax... [more]
F0XW00_AURAN2.580e-2962.82Dynein light chain (Fragment) n=1 Tax=Aureococcus ... [more]
A0A482SJR4_9ARCH7.300e-2865.28Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A8J2SHI5_9STRA1.220e-2562.03[Phosphatase 2A protein]-leucine-carboxy methyltra... [more]
A0A7S1YV50_9STRA1.300e-2558.33Dynein light chain n=1 Tax=Ditylum brightwellii Ta... [more]
A0A0R3UCN8_MESCO4.380e-2352.75Dynein light chain n=1 Tax=Mesocestoides corti Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001372Dynein light chain, type 1/2SMARTSM01375Dynein_light_2coord: 2..91
e-value: 6.9E-31
score: 118.6
IPR001372Dynein light chain, type 1/2PFAMPF01221Dynein_lightcoord: 12..90
e-value: 6.3E-27
score: 93.7
IPR001372Dynein light chain, type 1/2PANTHERPTHR11886DYNEIN LIGHT CHAINcoord: 12..92
IPR037177Dynein light chain superfamilyGENE3D3.30.740.10coord: 7..92
e-value: 4.3E-27
score: 96.0
IPR037177Dynein light chain superfamilySUPERFAMILY54648DLCcoord: 10..91
NoneNo IPR availablePANTHERPTHR11886:SF35DYNEIN LIGHT CHAIN 2, CYTOPLASMICcoord: 12..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig83contigE-siliculosus-1a_M_contig83:719603..721767 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig83.16513.1mRNA_E-siliculosus-1a_M_contig83.16513.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig83 719603..721767 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig83.16513.1 ID=prot_E-siliculosus-1a_M_contig83.16513.1|Name=mRNA_E-siliculosus-1a_M_contig83.16513.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=93bp
MESSGVSAKMVSDMDDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFE
VKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037177DLC_sf
IPR001372Dynein_light_chain_typ-1/2