prot_E-siliculosus-1a_M_contig83.16498.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig83.16498.1
Unique Nameprot_E-siliculosus-1a_M_contig83.16498.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length345
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig83.16498.1 vs. uniprot
Match: A0A6H5KA32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA32_9PHAE)

HSP 1 Score: 375 bits (964), Expect = 6.950e-126
Identity = 257/383 (67.10%), Postives = 260/383 (67.89%), Query Frame = 0
Query:    6 TEDGIERAMALSRGSQTTEGVFSRPP---QSDNSSGSAAGRTRTASSSSRQRALVSPIDASLTLWSEGRRERVAELEEELRLRDARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------------------RAVED----------------------------TATNTGASARSGEAAGTRDRGRPRGGSSSTTLEDRLGRWGAGWRPPALRPLPRGGEGFFSGWTHLGQPERFELVKSANRSVGPDGEPLSDAELEWAVLCLEEAEERMSAMDFSTAAGILEGVLGRCPGLTLAYYRLALCVLAARGEHGSRQAKLLLDCAMSLEGAENRHLSAGVDLVLRILR 313
            TEDG E  MALSRGSQTTE V SR     QSDN           ASSS RQRALVSPIDASLTLWS+GRRERVAELEEELRL DAR   XXXXXXXXXXXXXXXXXXXXX                                                          RA                               TAT  GASAR G+AAG RDR  PRGGSSSTTLEDRLGRWGAGWRPP LRPLPRGGEGFFSGWTHLGQPERFELVKSANRSVGPDGEPLSD ELEWAVLCLEEAEERMSAMDFSTAAGILEGVLGRCPGLTLAYYRLALC+LAARGEHGSRQAKLLLDCAMSLEGAENRHLSAGVDLVLRILR
Sbjct:   20 TEDGTE-PMALSRGSQTTEAVVSRSQPQAQSDNXXXXXXXXXXXASSS-RQRALVSPIDASLTLWSDGRRERVAELEEELRLWDARRRQXXXXXXXXXXXXXXXXXXXXXQEGESATGRDATPAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIPRATAQPPSRDHHGGXXXXXXXXXXXXXXXXXXGTATTAGASARPGDAAGARDRRHPRGGSSSTTLEDRLGRWGAGWRPPPLRPLPRGGEGFFSGWTHLGQPERFELVKSANRSVGPDGEPLSDPELEWAVLCLEEAEERMSAMDFSTAAGILEGVLGRCPGLTLAYYRLALCILAARGEHGSRQAKLLLDCAMSLEGAENRHLSAGVDLVLRILR 400          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16498.1 vs. uniprot
Match: D7FZF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF3_ECTSI)

HSP 1 Score: 313 bits (803), Expect = 2.040e-104
Identity = 189/316 (59.81%), Postives = 189/316 (59.81%), Query Frame = 0
Query:    1 MRCGGTEDGIERAMALSRGSQTTEGVFSRPP---QSDNSSGSAAGRTRTASSSSRQRALVSPIDASLTLWSEGRRERVAELEEELRLRDARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVEDTATNTGASARSGEAAGTRDRGRPRGGSSSTTLEDRLGRWGAGWRPPALRPLPRGGEGFFSGWTHLGQPERFELVKSANRSVGPDGEPLSDAELEWAVLCLEEAEERMSAMDFSTAAGILEGVLGRCPGLTLAYYRLALCVLAARGEHGSRQAKLLLDCAMSLEGAENRHLSAGVDLVLRILR 313
            MRCGGTEDG ERAMALSRGSQTTEGV SR     QSDNSSGSAAGRTRTASSS                                                                                                                   RL RWGAGWRPPALRPLPRGGEGFFSGWTHLGQ ERFELVKSANRSVGPDGEPLSDAELEWAVLCLEEAEERMSAM FSTAAGILEGVLGRCPGLTLAYYRLALCVLAARGEHGS QAKLLLDCAMSLEG ENRHLSAGVDLVLRILR
Sbjct:    1 MRCGGTEDGTERAMALSRGSQTTEGVVSRSQPQAQSDNSSGSAAGRTRTASSS-------------------------------------------------------------------------------------------------------------------RLARWGAGWRPPALRPLPRGGEGFFSGWTHLGQSERFELVKSANRSVGPDGEPLSDAELEWAVLCLEEAEERMSAMYFSTAAGILEGVLGRCPGLTLAYYRLALCVLAARGEHGSSQAKLLLDCAMSLEGVENRHLSAGVDLVLRILR 201          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16498.1 vs. uniprot
Match: A0A7S1CKU0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CKU0_9STRA)

HSP 1 Score: 110 bits (274), Expect = 2.170e-25
Identity = 67/162 (41.36%), Postives = 93/162 (57.41%), Query Frame = 0
Query:  179 LRPLPRGGEGFFSGWTHLGQPERFELVKSANRSVGPDGEPLSDAELEWAVLCLEEAEERMSAMDFSTAAGILEGVLGRCPGLTLAYYRLALCVLAARGEHGSRQAKLLLDCAMSLEGAENRHLSAGVDLVLRILRNDAIPESYWSEDYPRSLGDLRALDAAI 340
            L+PLP   E +++  T +G+ ERFELVKSA RS+   G   +D +LE  VL  E A+  M+  +F  A  +L     R P  TLAY+R A   LA  G  G   AK LL  A++LE   N+ L+ GVDL+LR++   A+P  YW  +  +S GD+ AL A +
Sbjct:    1 LKPLPHADE-YWTTETWMGECERFELVKSARRSLDATGRAPTDEQLELCVLLAEAADGAMTREEFPRARDLLLEAARRLPSFTLAYFRAAEATLAIDGRRGLAAAKPLLRAAVALEPG-NKQLATGVDLLLRVVSRVAVPGHYWLAENAKSSGDVLALAAIV 160          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig83.16498.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KA32_9PHAE6.950e-12667.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZF3_ECTSI2.040e-10459.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1CKU0_9STRA2.170e-2541.36Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 75..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig83contigE-siliculosus-1a_M_contig83:543767..548556 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig83.16498.1mRNA_E-siliculosus-1a_M_contig83.16498.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig83 543767..549542 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig83.16498.1 ID=prot_E-siliculosus-1a_M_contig83.16498.1|Name=mRNA_E-siliculosus-1a_M_contig83.16498.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=345bp
MRCGGTEDGIERAMALSRGSQTTEGVFSRPPQSDNSSGSAAGRTRTASSS
SRQRALVSPIDASLTLWSEGRRERVAELEEELRLRDARRRQQQQQQQQQQ
RREEDEDQEQQRTRQHRREAAVAAAARAVEDTATNTGASARSGEAAGTRD
RGRPRGGSSSTTLEDRLGRWGAGWRPPALRPLPRGGEGFFSGWTHLGQPE
RFELVKSANRSVGPDGEPLSDAELEWAVLCLEEAEERMSAMDFSTAAGIL
EGVLGRCPGLTLAYYRLALCVLAARGEHGSRQAKLLLDCAMSLEGAENRH
LSAGVDLVLRILRNDAIPESYWSEDYPRSLGDLRALDAAIDHLV*
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