prot_E-siliculosus-1a_M_contig83.16496.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig83.16496.1
Unique Nameprot_E-siliculosus-1a_M_contig83.16496.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length256
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig83.16496.1 vs. uniprot
Match: A0A6H5KJ01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ01_9PHAE)

HSP 1 Score: 244 bits (623), Expect = 1.510e-77
Identity = 133/155 (85.81%), Postives = 138/155 (89.03%), Query Frame = 0 
Query:    1 MLTYFRTLLVVEVLLARLSANSSAAAAAAVLRPGDIVTMSHRSKVTGSVEEKREAPWEEALRSQMPRFGRPDTVQFKPILPDGGTPHSPDGDQVAVVFAFSREQFVLRRVMLREEGGGREEGRRLKRLVVTFACAGGEIVNIRSDPV--CRVPLG 153
            M TYFR LLVVE+LLA LSA S AAAAAAVLRPGDIV+MS+RSKVTGSVEEKREAPWEEALRSQMPRFGRPDTVQFKP LPDGGT HS D DQVAVVFAF +EQFVLRRVMLREEG G EEGRRLKRLVVTFACAGGEIV IRSDPV  CR  +G
Sbjct:    1 MFTYFRALLVVELLLAHLSATSIAAAAAAVLRPGDIVSMSYRSKVTGSVEEKREAPWEEALRSQMPRFGRPDTVQFKPNLPDGGTSHSADRDQVAVVFAFFQEQFVLRRVMLREEGSGNEEGRRLKRLVVTFACAGGEIVKIRSDPVYACRTVVG 155
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig83.16496.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJ01_9PHAE1.510e-7785.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..255
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.622

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig83contigE-siliculosus-1a_M_contig83:525243..527893 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig83.16496.1mRNA_E-siliculosus-1a_M_contig83.16496.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig83 525243..528105 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig83.16496.1 ID=prot_E-siliculosus-1a_M_contig83.16496.1|Name=mRNA_E-siliculosus-1a_M_contig83.16496.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=256bp
MLTYFRTLLVVEVLLARLSANSSAAAAAAVLRPGDIVTMSHRSKVTGSVE
EKREAPWEEALRSQMPRFGRPDTVQFKPILPDGGTPHSPDGDQVAVVFAF
SREQFVLRRVMLREEGGGREEGRRLKRLVVTFACAGGEIVNIRSDPVCRV
PLGTPPRGGRAGWSLVPALRVPGGHDRARRGRVQQHCRGSGSGWDVGLAG
RGWESGVGGPPGREWGRRFATCGGRGRAAKTKIDSRFSVSGFMCHQDASS
GEAIS*
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