prot_E-siliculosus-1a_M_contig83.16484.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig83.16484.1
Unique Nameprot_E-siliculosus-1a_M_contig83.16484.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length839
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig83.16484.1 vs. uniprot
Match: D7FT47_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT47_ECTSI)

HSP 1 Score: 1364 bits (3530), Expect = 0.000e+0
Identity = 787/838 (93.91%), Postives = 797/838 (95.11%), Query Frame = 0 
Query:    1 MVDYSKWDNLDSDDSDSGSDGXXXXXXXXXXXQPSARKAADDKRQLDQADALRLQGNSAYELGDVSKAIAAYDAQLRVLEGRKDEAAVEMTCGALLNQASGFISLKKFEEAEARCSRLLASATPRGGTKAYGGAEARTRALHFRGFARLRLGLFDGACSDLRSSLAAGTSSGDEARALLLEAEAGAAMSSCPDPEAEGREHLRQGRGREAAKSFRDAASRARRRKDAAGAEAGEGAVATTVALSRNLRLEGIAVAMAGDPPSAEMLLRAALREFRVEGXXXXXXXXXXXXXEEEGLTLAALGSLLAQRGKHADALKPLREAVAVLDEAIAGVSANEGGAANSSAGTNAGSSPPTPSTTEGRITALTRTLTGTLAFLGTSLLAPEVQPSANYGSSXXXXXXXXXXXGVTPGVMKEGAEKVTVPAPGFSCDGKGPIVADSGAAGSSKEADEAIDVLKRAHEMLKAETAAMAAAGPGQKGGPAGVYSAVGESRGEADVRKQTAKVLDTLSEAYGREKRWERARSAAEQSLTAWRSLGAAGRVGAAASLLSLGHLLLQLHGVGAGFEEASTRWEEAATCFKDCAERPSVEAEVRLKIAGYYTKVARSDPARLESLEGKISAHYSEAAVLFARERDEKTSSLKRAAEAVAAAQAPRDKTAEGSGSAEPVPPLPPPLVDSLEPDGRSRWELAEKEAFAWEGCAGAAGDDHEAAVRALTKAEKLLDHASVSDKNERWTLRKVGVLDSLALALARSGEHAMAENKLLEAIRELQELDGVDSNAEACAHKGTLTNLYKYLAIARRARGDLPGAKEALAKVETLGGCEGREELEGLNRLLAESAVSVG 838
            MVDYSKWDNLDSDDS SGSDGXXXXXXXXXXX PSARKAADDKRQLDQA+ALRLQGNSAYELGDVSKAIAAYDAQLRVLEGRKDEAAVEMTCGALLNQASGFISLKKF+EAEARCSRLLASATPRGGTKAYGGAEARTRALHFRGFAR RLGLFDGACSDLRSSLAAGTSSGDEARALLLEAEAGAAMSSCPDPEAEGREHLRQGRGREAAKSFRDAASRARRRKDAAGAEAGEGAVATTVALSRNLRLEGIAVAMAGDPPSAEMLLR ALR+ RV GXXXXXXXXXXXXXEEEGLTLAALGSLLAQRGKHADAL+PLREAVAVLDEAIAGVSANEGG ANSSAGTNA SSPPTPS TEGRITALTRTLTGTLAFLGTSLLAPEVQPSANYGS+           GVTPGVMK GAEKVTVPAPGFSCD KGPIVADSG AGSSKEADEAIDVLKRAHEMLKAET AMA AGPGQKGG AGVYSAVGESRGEADVRKQTAKVLDTLSEAYGREKRWERAR AAEQSLTAWRSLG AGRVGAAASLLSLGHLLLQLHGVGAGFEEAS RWEEAATCFK CAERPSVEAEVRLKIAGYYTKVARSDPARLESLEGKISAHYSEAAVLFARERDEKTSSLKRAAEAVAAAQAPRDKTAEGSGSAEPVPPLPPPLVDSLEPDGRSRWELAE+EAFAWEG AGAAG+DHEAAV AL KAEKLLDHASVSDK+ERWTLRKVGVL SLALALARSGEHAMAENKLLEAIRELQ+LDGVDS AEAC HKGTLT+LYKYLAI RRARGD  GAK ALAKVETLGGCEG EELEGLNRLLAESAVSVG
Sbjct:    1 MVDYSKWDNLDSDDSGSGSDGXXXXXXXXXXX-PSARKAADDKRQLDQAEALRLQGNSAYELGDVSKAIAAYDAQLRVLEGRKDEAAVEMTCGALLNQASGFISLKKFKEAEARCSRLLASATPRGGTKAYGGAEARTRALHFRGFARFRLGLFDGACSDLRSSLAAGTSSGDEARALLLEAEAGAAMSSCPDPEAEGREHLRQGRGREAAKSFRDAASRARRRKDAAGAEAGEGAVATTVALSRNLRLEGIAVAMAGDPPSAEMLLRTALRDLRVGGXXXXXXXXXXXXXEEEGLTLAALGSLLAQRGKHADALEPLREAVAVLDEAIAGVSANEGGVANSSAGTNARSSPPTPSITEGRITALTRTLTGTLAFLGTSLLAPEVQPSANYGSNGSSTTTTSSG-GVTPGVMKGGAEKVTVPAPGFSCDDKGPIVADSGEAGSSKEADEAIDVLKRAHEMLKAETVAMATAGPGQKGGLAGVYSAVGESRGEADVRKQTAKVLDTLSEAYGREKRWERARLAAEQSLTAWRSLGVAGRVGAAASLLSLGHLLLQLHGVGAGFEEASARWEEAATCFKGCAERPSVEAEVRLKIAGYYTKVARSDPARLESLEGKISAHYSEAAVLFARERDEKTSSLKRAAEAVAAAQAPRDKTAEGSGSAEPVPPLPPPLVDSLEPDGRSRWELAEQEAFAWEGYAGAAGEDHEAAVTALAKAEKLLDHASVSDKDERWTLRKVGVLHSLALALARSGEHAMAENKLLEAIRELQQLDGVDSIAEACVHKGTLTDLYKYLAIVRRARGDFAGAKAALAKVETLGGCEGSEELEGLNRLLAESAVSVG 836
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig83.16484.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FT47_ECTSI0.000e+093.91Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 444..464
NoneNo IPR availablePANTHERPTHR46423FAMILY NOT NAMEDcoord: 2..169
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 500..533
e-value: 270.0
score: 2.3
coord: 735..768
e-value: 200.0
score: 3.5
coord: 49..82
e-value: 2.8
score: 16.9
coord: 92..125
e-value: 450.0
score: 0.4
coord: 138..171
e-value: 260.0
score: 2.5
coord: 295..328
e-value: 73.0
score: 7.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 14..330
e-value: 1.6E-13
score: 52.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 48..607

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig83contigE-siliculosus-1a_M_contig83:371493..379210 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig83.16484.1mRNA_E-siliculosus-1a_M_contig83.16484.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig83 371413..379909 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig83.16484.1 ID=prot_E-siliculosus-1a_M_contig83.16484.1|Name=mRNA_E-siliculosus-1a_M_contig83.16484.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=839bp
MVDYSKWDNLDSDDSDSGSDGAAAAVKTKQQQQPSARKAADDKRQLDQAD
ALRLQGNSAYELGDVSKAIAAYDAQLRVLEGRKDEAAVEMTCGALLNQAS
GFISLKKFEEAEARCSRLLASATPRGGTKAYGGAEARTRALHFRGFARLR
LGLFDGACSDLRSSLAAGTSSGDEARALLLEAEAGAAMSSCPDPEAEGRE
HLRQGRGREAAKSFRDAASRARRRKDAAGAEAGEGAVATTVALSRNLRLE
GIAVAMAGDPPSAEMLLRAALREFRVEGGGGRAGGGGGGAVEEEGLTLAA
LGSLLAQRGKHADALKPLREAVAVLDEAIAGVSANEGGAANSSAGTNAGS
SPPTPSTTEGRITALTRTLTGTLAFLGTSLLAPEVQPSANYGSSSSTTTT
SSSSGGVTPGVMKEGAEKVTVPAPGFSCDGKGPIVADSGAAGSSKEADEA
IDVLKRAHEMLKAETAAMAAAGPGQKGGPAGVYSAVGESRGEADVRKQTA
KVLDTLSEAYGREKRWERARSAAEQSLTAWRSLGAAGRVGAAASLLSLGH
LLLQLHGVGAGFEEASTRWEEAATCFKDCAERPSVEAEVRLKIAGYYTKV
ARSDPARLESLEGKISAHYSEAAVLFARERDEKTSSLKRAAEAVAAAQAP
RDKTAEGSGSAEPVPPLPPPLVDSLEPDGRSRWELAEKEAFAWEGCAGAA
GDDHEAAVRALTKAEKLLDHASVSDKNERWTLRKVGVLDSLALALARSGE
HAMAENKLLEAIRELQELDGVDSNAEACAHKGTLTNLYKYLAIARRARGD
LPGAKEALAKVETLGGCEGREELEGLNRLLAESAVSVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR019734TPR_repeat