prot_E-siliculosus-1a_M_contig83.16467.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig83.16467.1
Unique Nameprot_E-siliculosus-1a_M_contig83.16467.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length849
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig83.16467.1 vs. uniprot
Match: A0A6H5KQZ1_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ1_9PHAE)

HSP 1 Score: 1327 bits (3434), Expect = 0.000e+0
Identity = 768/848 (90.57%), Postives = 784/848 (92.45%), Query Frame = 0
Query:    1 MMSTEVPLDVCTHACQLLGASLFVASRQSSPETWVGLVKVIPEGGVDGLLECLRVAPARAKAARALFYAAKVPLAGGTGGELIESRGGVSIILEVLESLPLAPPPTAAVETKGLRVWLCATLQPVMADRPRAVQAFLACRGIPLLCRQLVAGPADIAVHVCGVLASALRSGGSGGVADSSAAVPRSAIEAVDASIIDPLLGMLAGGTNKDAHASALAMELLVVLASHPPFSGRLRAAGTIPAVAACLEDHPARGAAAAEPVARASLMQLALIVLTGFLSGDGDQPSAVAVAAAGEVDEVAAEIAATRAHVRVVALLSAPDPKLRFTAAELALQLSRRCHPGPAPNSXXXXXXXXXXXIAKDMIEAGGLGALWTACSDPSPMARPVALEALAAMLGTAAAMSRSNASSEAVLALVSEGAVGGLVRRHVDPALSALGRRGRGGTGSGSATTPGDAAAAS----VATSALLALHFLAANPDPAVHGLFVVAAGVDEQXXXXXXXXXXS-TWSTILSCVEAGAEGRGGPAFLEAALLAAGSVCGAPPLPVLGGGGGAVAPSGSVAADEIDRILPAYQARAQTADCLLAAASATSRGLATRAVALLDAGGSSGRGGFLSTDSEALSSAKLTRAAIRVVWSLSRGPSSATLAAHGTLPRLMGRMSCLRRKDSGGXXXXADGARGDMAAGVLVLDTIAAFLSLEDSSNGHRRGGSKDSAAPVSPATATTIGRTVDELCELVLHGTTAKRAATADDAGDGGSSAAAAGSLGPRSLALLAKAAANPRLRPMLVDSPKFPAVLNLLMVERHLDGASSNNEISLEVALGALSVVEAAVSDERTASRLVKLGVVSKLAAL 843
            MMSTEVPLDVCTHACQLLGASLFVASRQSSP+TWV LVKVIPEGGVDGLLECLRVAPARAKAARALFYAAKVPLAGGTGGELIESRGGVSI+LEVLESLPLAPPPTAAVETKGLRVWLCATLQPVMADRPRAVQAFLACRGIPLLCRQLVAGPADIAVHVCGVLASALRSG         AAVPRSAIEAVDASIIDPLLGMLAGGT+KDAHASALAMELLVVLASHPPFSGRLRAAGTIPAVAACLEDHPARGAAAAEPV RASLMQLALIVLTGFL GDGDQP+A A A   +VDE+AAEIAATRAHVRVVALLSAPDPKLRFT AELALQLSRRC PGPAPNS           IAKDMIEAGGLGALW ACSDPSPMARPVALEALAAMLGTAAAMSRS ASSEAVLALVSEGAV GLVR+HVDPALS LGRRGRG  G GSAT PGDAAAA+    VATSALLALHFLAANPDPAVHGLFVVAAGVDEQXXXXXXXXXXS TWSTILS VEAGAEGRGGPAFLEAALLAAGSVCGAPPLPVLG GGGAVAPSGSVAADE+DR+LPAYQARAQTA+CLLAAASATSRGLATRAVALLDAGGSSG GGF+STDSEALSSAKLTRAAIRVVWSLSRGPSSATLAAHGTLPRLMGRMSCLR K SGG    AD ARGD AAGVLVLDTIAAFLSLEDSS+GHRRG S+DS APVSPATA TIGRTVDELCELVLHGTTA RA TA +AGDGGSS AAAGSLGPRSLALLAKAAANPRLRPMLVDSPKFPAVL+LLMV RHLDGASSNN I LEVALGALSVVEAAVSDERTASRLVKLGVVSKLAAL
Sbjct:  135 MMSTEVPLDVCTHACQLLGASLFVASRQSSPKTWVDLVKVIPEGGVDGLLECLRVAPARAKAARALFYAAKVPLAGGTGGELIESRGGVSIMLEVLESLPLAPPPTAAVETKGLRVWLCATLQPVMADRPRAVQAFLACRGIPLLCRQLVAGPADIAVHVCGVLASALRSGXXXXXXXXXAAVPRSAIEAVDASIIDPLLGMLAGGTSKDAHASALAMELLVVLASHPPFSGRLRAAGTIPAVAACLEDHPARGAAAAEPVTRASLMQLALIVLTGFLRGDGDQPAAAAEA---KVDEIAAEIAATRAHVRVVALLSAPDPKLRFTTAELALQLSRRCRPGPAPNSNRGGGGG----IAKDMIEAGGLGALWRACSDPSPMARPVALEALAAMLGTAAAMSRSRASSEAVLALVSEGAVEGLVRQHVDPALSVLGRRGRGVAGGGSATIPGDAAAAATXXXVATSALLALHFLAANPDPAVHGLFVVAAGVDEQXXXXXXXXXXSSTWSTILSSVEAGAEGRGGPAFLEAALLAAGSVCGAPPLPVLGVGGGAVAPSGSVAADEVDRVLPAYQARAQTANCLLAAASATSRGLATRAVALLDAGGSSGGGGFISTDSEALSSAKLTRAAIRVVWSLSRGPSSATLAAHGTLPRLMGRMSCLRLKGSGGGGG-ADRARGDTAAGVLVLDTIAAFLSLEDSSSGHRRGSSEDSVAPVSPATAATIGRTVDELCELVLHGTTANRA-TAYNAGDGGSSGAAAGSLGPRSLALLAKAAANPRLRPMLVDSPKFPAVLDLLMVGRHLDGASSNNAIPLEVALGALSVVEAAVSDERTASRLVKLGVVSKLAAL 973          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16467.1 vs. uniprot
Match: D7FT64_ECTSI (E3 ubiquitin-protein ligase Nedd-4, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT64_ECTSI)

HSP 1 Score: 1013 bits (2618), Expect = 0.000e+0
Identity = 610/804 (75.87%), Postives = 619/804 (76.99%), Query Frame = 0
Query:    1 MMSTEVPLDVCTHACQLLGASLFVASRQSSPETWVGLVKVIPEGGVDGLLECLRVAPARAKAARALFYAAKVPLAGGTGGELIESRGGVSIILEVLESLPLAPPPTAAVETKGLRVWLCATLQPVMADRPRAVQAFLACRGIPLLCRQLVAGPADIAVHVCGVLASALRSGGSGGVADSSAAVPRSAIEAVDASIIDPLLGMLAGGTNKDAHASALAMELLVVLASHPPFSGRLRAAGTIPAVAACLEDHPARGAAAA--EPVARASLMQLALIVLTGFLSGDGDQPSAVAVAAAGEVDEVAAEIAATRAHVRVVALLSAPDPKLRFTAAELALQLSRRCHPGPAPNSXXXXXXXXXXXIAKDMIEAGGLGALWTACSDPSPMARPVALEALAAMLGTAAAMSRSNASSEAVLALVSEGAVGGLVRRHVDPALSALGRRGRGGTGSGSATTPGDAAAASVATSALLALHFLAANPDPAVHGLFVVAAGVDEQXXXXXXXXXXSTWSTILSCVEAGAEGRGGPAFLEAALLAAGSVCGAPPLPVLGGGGGAVAPSGSVAADEIDRILPAYQARAQTADCLLAAASATSRGLATRAVALLDAGGSSGRGGFLSTDSEALSSAKLTRAAIRVVWSLSRGPSSATLAAHGTLPRLMGRMSCLRRKDSGGXXXXADGARGDMAAGVLVLDTIAAFLSLEDSSNGHRRGGSKDSAAPVSPATATTIGRTVDELCELVLHGTTAKRAATADDAGDGGSSAAAAGSLGPRSLALLAKAAANPRLRPMLVDSPKFPAVLNLLMVERHLDGASS 802
            MMSTEVPLDVCTHACQLLGASLFVASRQSSPETWVGLVKVIPEG VDGLLECLRVAPARAKAARALFYAAKVPLAGGTGGELIESRGGVSI+LEVLESLPLAPPPTAAVETKGLRVWLCATLQPVMADRPRAVQAFLACRGIPLLCRQL AGPADIAVHVCGVLASALRSGG+G  A SSAAVPRSAIE VDASIIDPLLGMLAGGTNKDAHASALAMELLVVLASHPPFSGRLRAAGTIPAVAACLEDHPARGAAAA  EPVARASLMQLALIVLTGFL GDGDQP+AVA  A GEVDEVAAEIAATRAHVRVVALLSAPDPKLRFTAAELALQLSRRC PGPA   XXXXXXX    IAKDMIEAGGLGALW+ACSDPSPMARPVALEALAAMLGTAAAMSRS+ASSEAVLALVSEGAVGGLVR+HVDPALS LGRRGRG T                                                                                                                                                      VALLDAGGSSGRGGFLSTDSEALSSAKLTRAAIRVVWSLSRGPSSATLAAHGTLPRLMG MSCLRRK SGG    ADGARGD AAGVLVLDTIAAFLSLEDSS+GHRRGGSKDS APV P+TATTIGRTVDELCELVLHGTT KRA TADDAGD GSS AAAGSLGPRSLALLAKAAANPRLRPMLVDSPKFPAVL+LLMVERHLDGASS
Sbjct:  301 MMSTEVPLDVCTHACQLLGASLFVASRQSSPETWVGLVKVIPEGCVDGLLECLRVAPARAKAARALFYAAKVPLAGGTGGELIESRGGVSIMLEVLESLPLAPPPTAAVETKGLRVWLCATLQPVMADRPRAVQAFLACRGIPLLCRQLAAGPADIAVHVCGVLASALRSGGAGAGAGSSAAVPRSAIETVDASIIDPLLGMLAGGTNKDAHASALAMELLVVLASHPPFSGRLRAAGTIPAVAACLEDHPARGAAAAAAEPVARASLMQLALIVLTGFLRGDGDQPAAVA--ATGEVDEVAAEIAATRAHVRVVALLSAPDPKLRFTAAELALQLSRRCRPGPAXXXXXXXXXXG---IAKDMIEAGGLGALWSACSDPSPMARPVALEALAAMLGTAAAMSRSSASSEAVLALVSEGAVGGLVRQHVDPALSVLGRRGRGVT------------------------------------------------------------------------------------------------------------------------------------------------------VALLDAGGSSGRGGFLSTDSEALSSAKLTRAAIRVVWSLSRGPSSATLAAHGTLPRLMGHMSCLRRKGSGGGG--ADGARGDTAAGVLVLDTIAAFLSLEDSSSGHRRGGSKDSVAPVPPSTATTIGRTVDELCELVLHGTTTKRA-TADDAGDDGSSGAAAGSLGPRSLALLAKAAANPRLRPMLVDSPKFPAVLDLLMVERHLDGASS 946          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig83.16467.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KQZ1_9PHAE0.000e+090.57FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FT64_ECTSI0.000e+075.87E3 ubiquitin-protein ligase Nedd-4, putative n=1 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 178..438
e-value: 5.3E-11
score: 44.2
coord: 2..177
e-value: 2.4E-5
score: 25.7
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 191..395
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 36..254
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 312..847

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig83contigE-siliculosus-1a_M_contig83:225671..229499 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig83.16467.1mRNA_E-siliculosus-1a_M_contig83.16467.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig83 225671..232313 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig83.16467.1 ID=prot_E-siliculosus-1a_M_contig83.16467.1|Name=mRNA_E-siliculosus-1a_M_contig83.16467.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=849bp
MMSTEVPLDVCTHACQLLGASLFVASRQSSPETWVGLVKVIPEGGVDGLL
ECLRVAPARAKAARALFYAAKVPLAGGTGGELIESRGGVSIILEVLESLP
LAPPPTAAVETKGLRVWLCATLQPVMADRPRAVQAFLACRGIPLLCRQLV
AGPADIAVHVCGVLASALRSGGSGGVADSSAAVPRSAIEAVDASIIDPLL
GMLAGGTNKDAHASALAMELLVVLASHPPFSGRLRAAGTIPAVAACLEDH
PARGAAAAEPVARASLMQLALIVLTGFLSGDGDQPSAVAVAAAGEVDEVA
AEIAATRAHVRVVALLSAPDPKLRFTAAELALQLSRRCHPGPAPNSNRGG
GGGGGGGIAKDMIEAGGLGALWTACSDPSPMARPVALEALAAMLGTAAAM
SRSNASSEAVLALVSEGAVGGLVRRHVDPALSALGRRGRGGTGSGSATTP
GDAAAASVATSALLALHFLAANPDPAVHGLFVVAAGVDEQQGGAARGGGG
STWSTILSCVEAGAEGRGGPAFLEAALLAAGSVCGAPPLPVLGGGGGAVA
PSGSVAADEIDRILPAYQARAQTADCLLAAASATSRGLATRAVALLDAGG
SSGRGGFLSTDSEALSSAKLTRAAIRVVWSLSRGPSSATLAAHGTLPRLM
GRMSCLRRKDSGGGGGGADGARGDMAAGVLVLDTIAAFLSLEDSSNGHRR
GGSKDSAAPVSPATATTIGRTVDELCELVLHGTTAKRAATADDAGDGGSS
AAAAGSLGPRSLALLAKAAANPRLRPMLVDSPKFPAVLNLLMVERHLDGA
SSNNEISLEVALGALSVVEAAVSDERTASRLVKLGVVSKLAALVRQKPA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR011989ARM-like