prot_E-siliculosus-1a_M_contig83.16466.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig83.16466.1
Unique Nameprot_E-siliculosus-1a_M_contig83.16466.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length615
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig83.16466.1 vs. uniprot
Match: D7FT64_ECTSI (E3 ubiquitin-protein ligase Nedd-4, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT64_ECTSI)

HSP 1 Score: 780 bits (2014), Expect = 4.100e-258
Identity = 510/569 (89.63%), Postives = 522/569 (91.74%), Query Frame = 0
Query:   27 AEVVAPRREEVCAGLRVLAGLAAHEACVPLVLESEDLGCLLQVIREAMTPTPAVGREAPGGSGHRVRAEMREEVEDALRCLLPLTARPQRRSSLNRALGLVATSPAHPGLDALLNLASAEGGPALQVVFQLVAADAAKSVPSSPVLRPLGDGRHPAVLKGLLGPADFPWQGGIGPSARDSAVKAARARACDALRHACSELSLSSSSAPAATRDPGNPTGXXXXXXXXXXDSAEAGPGGNVTAGGGKLDVEAVAEVFPLVLSLAGTTLEGARCLRAMFAARGGGGEAAQASVLGGGVVGDAGGAGAAGIGAIVGMLHSTPLEIRAAGASILRKLVFATAAPAHRPDGGGQAAAASTRPCRALLESLHACGGRSEALRSLSSVGLFGEQDQAAVPGGTMAVIDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGA-----EDAEGLVGWSGGGEEGFDAQESEALSGVCVEALQALATDNFTGPLEKARCLALLADLALDPRCARTLFQGGAIPQMLLNAQGCTHVDLID 590
            + V APRREEVCAGLRVLAGLAAHEACVPLVLESEDLGCLLQ I E MTPTPAVGRE PGG G  VRA+MREE+EDALRCLLPL  RPQ+RSSLNRALGLVATSPAHPGLDALL+LASAEGGPALQVVFQLVAADAAKSVPSSPVLRPLGDGRHPAVLKGLLGPADFPWQGGIGPSARDSAVKAARARACDALRHACSELS SSSSAPAA RD GNPTG          DSAEAGPGGNVTAG GKLDVEAVAEVFPLVL LAGTTLEGARCLRAMFAARGG GEAAQA+VL  GVVGDA GAGA GIGAIV MLHST +EIRAAGASILRKLVF TAAP HRP+GGGQAAAAS RPCRALLESLHACGGRSEALRSLSS GLFGEQDQAAVPGGT++VIDN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        E AEGLVGW+GGGEEGFDAQESEALSGVCVEALQALATDNFTGPLEKARCL+LLADLALDPRCARTLFQGGAIPQMLLNAQGCTHVDLID
Sbjct:  945 SSVEAPRREEVCAGLRVLAGLAAHEACVPLVLESEDLGCLLQGIPEGMTPTPAVGRETPGGHGPPVRAQMREEMEDALRCLLPLKGRPQQRSSLNRALGLVATSPAHPGLDALLHLASAEGGPALQVVFQLVAADAAKSVPSSPVLRPLGDGRHPAVLKGLLGPADFPWQGGIGPSARDSAVKAARARACDALRHACSELSPSSSSAPAAARDTGNPTGDGG-------DSAEAGPGGNVTAGSGKLDVEAVAEVFPLVLPLAGTTLEGARCLRAMFAARGGVGEAAQAAVLRRGVVGDAAGAGAGGIGAIVAMLHSTYVEIRAAGASILRKLVFPTAAPTHRPEGGGQAAAASIRPCRALLESLHACGGRSEALRSLSSFGLFGEQDQAAVPGGTLSVIDNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEAAEGLVGWNGGGEEGFDAQESEALSGVCVEALQALATDNFTGPLEKARCLSLLADLALDPRCARTLFQGGAIPQMLLNAQGCTHVDLID 1506          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16466.1 vs. uniprot
Match: A0A6H5KQZ1_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ1_9PHAE)

HSP 1 Score: 544 bits (1401), Expect = 2.260e-170
Identity = 348/520 (66.92%), Postives = 358/520 (68.85%), Query Frame = 0
Query:   26 TAEVVAPRREEVCAGLRVLAGLAAHEACVPLVLESEDLGCLLQVIREAMTPTPAVGREAPGGSGHRVRAEMREEVEDALRCLLPLTARPQRRSSLNRALGLVATSPAHPGLDALLNLASAEGGPALQVVFQLVAADAAKSVPSSPVLRPLGDGRHPAVLKGLLGPADFPWQGGIGPSARDSAVKAARARACDALRHACSELSLSSSSAPAATRDPGNPTGXXXXXXXXXXDSAEAGPGGNVTAGGGKLDVEAVAEVFPLVLSLAGTTLEGARCLRAMFAARGGGGEAAQASVLGGGVVGDAGGAGAAGIGAIVGMLHSTPLEIRAAGASILRKLVFATAAPAHRPDGGGQAAAA------STRPCRALLESLHACGGRSEALRSLSSVGLFGEQDQAAVPGGTMAVIDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SGAEDAEGLVGWSGGGEEGFDAQESEALSGVCVEALQAL 536
            TAEV APR +EVCAGLRVLAGLAAHEACVPLVLESEDLGCLLQVIREAMTPT A GREA GGSGHRVRAEMREEVEDALRCLL LTARPQ+RSSLNRALGLVATSPAHP LDALLNLAS EGGPALQ                                    GPADFPWQGGIGP+ARDS VKAARARACDALR ACSEL  SSS AP A RDPG P+G          DSAEAG GGNVTAGGGKLDVEAVAEVFPLV SLA TTLEGARCLRAMFAARGG GEAAQA+VL GGVVGD GG GA GI AIV MLHS  +EIRAAGASILRKLVFA+AAP H                 STRPCRALLESLHACGGRSEALRSL SVGLFGEQDQAAVP GT+AVIDN XXXXXX                                                                 SGAE A+GLVG SGGGEEGFDAQESEALSGVCVEAL+AL
Sbjct:  994 TAEVEAPR-QEVCAGLRVLAGLAAHEACVPLVLESEDLGCLLQVIREAMTPTSAAGREASGGSGHRVRAEMREEVEDALRCLLSLTARPQQRSSLNRALGLVATSPAHPRLDALLNLASVEGGPALQ------------------------------------GPADFPWQGGIGPAARDSVVKAARARACDALRRACSELWPSSSPAPVAARDPGVPSGGGGSGG----DSAEAGLGGNVTAGGGKLDVEAVAEVFPLVFSLARTTLEGARCLRAMFAARGGVGEAAQAAVLRGGVVGDGGGPGAGGITAIVAMLHSKHVEIRAAGASILRKLVFASAAPTHXXXXXXXXXXXXXXXXXSTRPCRALLESLHACGGRSEALRSLCSVGLFGEQDQAAVPSGTIAVIDNGXXXXXXERAGSRKGNAGCGRRKGAAQEARWRGQLRDDATAVLVSLVGAVTGGAGNGSGGAPSWRQLRRRRSSGAEAADGLVGLSGGGEEGFDAQESEALSGVCVEALRAL 1472          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig83.16466.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FT64_ECTSI4.100e-25889.63E3 ubiquitin-protein ligase Nedd-4, putative n=1 T... [more]
A0A6H5KQZ1_9PHAE2.260e-17066.92FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig83contigE-siliculosus-1a_M_contig83:220267..225631 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig83.16466.1mRNA_E-siliculosus-1a_M_contig83.16466.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig83 220267..225631 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig83.16466.1 ID=prot_E-siliculosus-1a_M_contig83.16466.1|Name=mRNA_E-siliculosus-1a_M_contig83.16466.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=615bp
GGEAPQGGAARGGAASPPPPAAAGATAEVVAPRREEVCAGLRVLAGLAAH
EACVPLVLESEDLGCLLQVIREAMTPTPAVGREAPGGSGHRVRAEMREEV
EDALRCLLPLTARPQRRSSLNRALGLVATSPAHPGLDALLNLASAEGGPA
LQVVFQLVAADAAKSVPSSPVLRPLGDGRHPAVLKGLLGPADFPWQGGIG
PSARDSAVKAARARACDALRHACSELSLSSSSAPAATRDPGNPTGGGGGG
GGGGGDSAEAGPGGNVTAGGGKLDVEAVAEVFPLVLSLAGTTLEGARCLR
AMFAARGGGGEAAQASVLGGGVVGDAGGAGAAGIGAIVGMLHSTPLEIRA
AGASILRKLVFATAAPAHRPDGGGQAAAASTRPCRALLESLHACGGRSEA
LRSLSSVGLFGEQDQAAVPGGTMAVIDNGGGGERAGSRKGSAGGGRRKGA
AQEARWRRQLRDDAAAVLVAVVGAVTSGAGNGSGGGASWRQRRRRRSSGA
EDAEGLVGWSGGGEEGFDAQESEALSGVCVEALQALATDNFTGPLEKARC
LALLADLALDPRCARTLFQGGAIPQMLLNAQGCTHVDLIDGFVTDSRFAD
SVVSLWRRGTAPCAS
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