prot_E-siliculosus-1a_M_contig82.16426.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig82.16426.1
Unique Nameprot_E-siliculosus-1a_M_contig82.16426.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length236
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig82.16426.1 vs. uniprot
Match: D7FWH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWH1_ECTSI)

HSP 1 Score: 446 bits (1148), Expect = 3.290e-158
Identity = 234/235 (99.57%), Postives = 235/235 (100.00%), Query Frame = 0 
Query:    1 MSSAPAVPAGVRHRAGAAPSTAGRGPPPSTPASRARNDQPKQRKVFLVYWAVCFATAITWLFAVAAASDDAWLQFEGYPLLKLGERCEFSASFCDYYKTGTAFQFFAAIVISATVVVMIVAAFKPAPATGRLGAAAGTMLLVFSLLQLAAFSIMAASAGRLNRDNDNYFQIKAGPTIGVAVIAWVFGLAGGSAILLLRPHATPGQDGPLRRFSRREGVRSAPRPRAPSSPSGVTI 235
            MSSAPAVPAGVRHRAGAAPSTAGRGPPPSTPASRARNDQPKQRKVFLVYWAVCFATAITWLFAVAAASDDAWLQFEGYPLLKLGERCEFSASFCDYYKTGTAFQFFAAIVISATVVVMIVAAFKPAPATGRLGAAAGTMLLVFS+LQLAAFSIMAASAGRLNRDNDNYFQIKAGPTIGVAVIAWVFGLAGGSAILLLRPHATPGQDGPLRRFSRREGVRSAPRPRAPSSPSGVTI
Sbjct:    1 MSSAPAVPAGVRHRAGAAPSTAGRGPPPSTPASRARNDQPKQRKVFLVYWAVCFATAITWLFAVAAASDDAWLQFEGYPLLKLGERCEFSASFCDYYKTGTAFQFFAAIVISATVVVMIVAAFKPAPATGRLGAAAGTMLLVFSVLQLAAFSIMAASAGRLNRDNDNYFQIKAGPTIGVAVIAWVFGLAGGSAILLLRPHATPGQDGPLRRFSRREGVRSAPRPRAPSSPSGVTI 235
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BLAST of mRNA_E-siliculosus-1a_M_contig82.16426.1 vs. uniprot
Match: A0A6H5JD07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD07_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 6.790e-24
Identity = 58/109 (53.21%), Postives = 73/109 (66.97%), Query Frame = 0 
Query:   49 YWAVCFATAI-TWLFAVAAASDDAWLQFEGYPLLKLGERCEFSASFCDYYKTGTAFQFFAAIVISATVVVMIVAAFKPAPATGRLGAAAGTMLLVFSLLQLAAFSIMAA 156
            YW V F T I TW+FAVAAA+DDAW+  + Y    LGE C+    FC  YK  TAFQ+ A IV+S  +V+++VAAF PAP TG+LG A G ML VF++ +L AF   AA
Sbjct:    9 YWIVLFVTTIFTWIFAVAAAADDAWIA-DAYEA-GLGESCD-GYDFCGLYKAATAFQYLATIVVSVVLVMVVVAAFTPAPVTGKLGLAVGIMLFVFAVFELLAFCTYAA 114
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig82.16426.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWH1_ECTSI3.290e-15899.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JD07_9PHAE6.790e-2453.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 68..101
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..45
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..67
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 135..157
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 102..123
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 177..197
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 158..176
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 124..134
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 198..235
NoneNo IPR availableTMHMMTMhelixcoord: 173..195
NoneNo IPR availableTMHMMTMhelixcoord: 136..158
NoneNo IPR availableTMHMMTMhelixcoord: 45..67
NoneNo IPR availableTMHMMTMhelixcoord: 101..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig82contigE-siliculosus-1a_M_contig82:515323..520455 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig82.16426.1mRNA_E-siliculosus-1a_M_contig82.16426.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig82 514805..520962 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig82.16426.1 ID=prot_E-siliculosus-1a_M_contig82.16426.1|Name=mRNA_E-siliculosus-1a_M_contig82.16426.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=236bp
MSSAPAVPAGVRHRAGAAPSTAGRGPPPSTPASRARNDQPKQRKVFLVYW
AVCFATAITWLFAVAAASDDAWLQFEGYPLLKLGERCEFSASFCDYYKTG
TAFQFFAAIVISATVVVMIVAAFKPAPATGRLGAAAGTMLLVFSLLQLAA
FSIMAASAGRLNRDNDNYFQIKAGPTIGVAVIAWVFGLAGGSAILLLRPH
ATPGQDGPLRRFSRREGVRSAPRPRAPSSPSGVTI*
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