prot_E-siliculosus-1a_M_contig82.16419.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig82.16419.1
Unique Nameprot_E-siliculosus-1a_M_contig82.16419.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length128
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig82.16419.1 vs. uniprot
Match: A0A6H5JM54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM54_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 1.630e-74
Identity = 119/129 (92.25%), Postives = 122/129 (94.57%), Query Frame = 0 
Query:    1 MSWAGLSVTLWAVVGGVFILLLLAIDRWTHCARNCC--CRCKKPPPDPLDGVPEQPDVENQEGYHREHDRDFERNWHVVALQRDETQEEAEEILRLRAEAARRRELEAASREKVKIVRGVATVRGIQTE 127
            MS+AGLSVTLWAVVGGVFILLLLA+DRW HC RN    C CKKPPPDPLDGVPEQPDVENQEGYHREHDRDFERNWH+VALQRDETQEEAEEILRLRAEAARRRELEAASREKVKIVRGVATVRGIQTE
Sbjct:    1 MSYAGLSVTLWAVVGGVFILLLLAMDRWIHCTRNWADWCSCKKPPPDPLDGVPEQPDVENQEGYHREHDRDFERNWHLVALQRDETQEEAEEILRLRAEAARRRELEAASREKVKIVRGVATVRGIQTE 129
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BLAST of mRNA_E-siliculosus-1a_M_contig82.16419.1 vs. uniprot
Match: D7FWH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWH8_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 5.700e-47
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 
Query:   45 DPLDGVPEQPDVENQEGYHREHDRDFERNWHVVALQRDETQEEAEEILRLRAEAARRRELEAASREKVKIVRGVATVRGIQTE 127
            DPLDGVPEQPDVENQEGYHREHDRDFERNWHVVALQRDETQEEAEEILRLRAEAARRRELEAASREKVKIVRGVATVRGIQTE
Sbjct:   22 DPLDGVPEQPDVENQEGYHREHDRDFERNWHVVALQRDETQEEAEEILRLRAEAARRRELEAASREKVKIVRGVATVRGIQTE 104
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig82.16419.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JM54_9PHAE1.630e-7492.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWH8_ECTSI5.700e-47100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 81..101
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..127
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..31
score: 0.525
NoneNo IPR availableTMHMMTMhelixcoord: 4..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig82contigE-siliculosus-1a_M_contig82:467325..470974 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig82.16419.1mRNA_E-siliculosus-1a_M_contig82.16419.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig82 467213..473313 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig82.16419.1 ID=prot_E-siliculosus-1a_M_contig82.16419.1|Name=mRNA_E-siliculosus-1a_M_contig82.16419.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=128bp
MSWAGLSVTLWAVVGGVFILLLLAIDRWTHCARNCCCRCKKPPPDPLDGV
PEQPDVENQEGYHREHDRDFERNWHVVALQRDETQEEAEEILRLRAEAAR
RRELEAASREKVKIVRGVATVRGIQTE*
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