prot_E-siliculosus-1a_M_contig82.16413.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig82.16413.1
Unique Nameprot_E-siliculosus-1a_M_contig82.16413.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length454
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig82.16413.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 65..69
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..64
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 392..420
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 98..117
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 70..89
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 160..352
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 381..391
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 118..136
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 353..380
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 421..453
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 90..97
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..45
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 137..159
NoneNo IPR availableTMHMMTMhelixcoord: 46..68
NoneNo IPR availableTMHMMTMhelixcoord: 396..418
NoneNo IPR availableTMHMMTMhelixcoord: 10..29
NoneNo IPR availableTMHMMTMhelixcoord: 133..155
NoneNo IPR availableTMHMMTMhelixcoord: 72..89
NoneNo IPR availableTMHMMTMhelixcoord: 96..118
NoneNo IPR availableTMHMMTMhelixcoord: 359..381

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig82contigE-siliculosus-1a_M_contig82:435965..437326 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig82.16413.1mRNA_E-siliculosus-1a_M_contig82.16413.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig82 435965..437326 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig82.16413.1 ID=prot_E-siliculosus-1a_M_contig82.16413.1|Name=mRNA_E-siliculosus-1a_M_contig82.16413.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=454bp
AAALTSPWRFLARGVGAAAVTVGAGSGVLHRRRCLWRPAPRPARRSMLVA
LTTVTSSSVPAVAASGAAPAAAHGFATAIVIAIVVVAIVRPRTPPPSLFA
AILAVAFASPAAAFRLAADGPVSVARGTFFARGPFLVVGPIVALLLVSVA
PLGGGVSAVSPARVSLLLPGPVPLLLLSRRAPAGPSLPLAVTDTLEAPFT
AAVAATTPSGPISPSIPAVLVLAPAARARRVAAADALPLVNRATTPAYRV
PAVVPPPFPFPRAARAATASLSPRLATAPPTFGGLEAHGGVAAVSALLFL
RRTVAAAATAPVIPPAVWGPGPAAIVASTPALAVVAYASAGASPPRPVAV
RAAVAAAAAAAAPPSPVAAAAAAAVAAAAAASSPPPPPPPSYSVAAAAVV
AAATAAAAATAAAAMAAAAAHAPGRKSYLRLEGSNGVLRKRSRALLVHVR
LSD*
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