prot_E-siliculosus-1a_M_contig82.16387.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig82.16387.1
Unique Nameprot_E-siliculosus-1a_M_contig82.16387.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length489
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig82.16387.1 vs. uniprot
Match: D8LQ38_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ38_ECTSI)

HSP 1 Score: 735 bits (1898), Expect = 1.590e-264
Identity = 414/448 (92.41%), Postives = 425/448 (94.87%), Query Frame = 0 
Query:   31 MALDDDASCSSGVMLLEVDECPSVGADIIFKNITGMLGAMVGVALLLNVFNRVSNRRRSRKLKKSIFTLPVYVYNSSTRERAKAARKARPQLQAPLDSSQGIEDVGSARSSXXXXXXXXXXXXXXXXXXXXXXDSASPITCAICLAAYQEEEVIKVLPCDHDFHSDCLDPWLEVKAECPLCKAPAFTKSRDRDEVAHGRAVHAINSSAVAQAPPLFRSRSRDESGGSQLDGRPRTEEGVDGGMLPVRPSSPLPPESSARSTQVGTNQEERSLPIERAGE--RTPEQARVLEGIQQTGEVVPVRPDWDARGESKMADFAADGQPLAAEHNISLDTAAAGVGAPNEPAVVGSRPLDVGDPAVTASAGSKAADGCADRQGNELGITSSESNIPPSFERGVNTTGVAQPRAAPGFGREEVSLDELETGQVGTGKGRGIADVATDGFSAVLAA 476
            MALDDDASCSSGVMLLEVDECPSVGADIIFKNITG+LGAMVGVALLLNVFNRVSNRRRSRKLKKSIFTLPVYVYNSSTRERAKAAR ARPQLQAPLDSSQGIEDVGSARSSXXXXXXXXXXXXXXXXXXXXXXDSASPITCAICLAAYQEEEVIKVLPC HDFHSDCLDPWLEVKAECPLCKAPAFTKSRDRDEVAHGRAVHAINSSA+AQAPPLFRSRS DES GSQLDGRPRTE GVDGGM PV+PSSPLPPESSARSTQVG NQEERSLPIERAGE  RTP QARVLEGIQQTGEVVPVRPDWDARGESKMADF ADGQPLAA HNI+ DTAAAG+GAP   AV+GSRPLDVG+ AVTA AGSKAAD CA+RQGNELGI+SSESNIPPS ERGV TTGVAQPRAAPGFGREEVSLDELETGQVGTGKGRGIADVATDGFSA + +
Sbjct:    1 MALDDDASCSSGVMLLEVDECPSVGADIIFKNITGILGAMVGVALLLNVFNRVSNRRRSRKLKKSIFTLPVYVYNSSTRERAKAARTARPQLQAPLDSSQGIEDVGSARSSXXXXXXXXXXXXXXXXXXXXXXDSASPITCAICLAAYQEEEVIKVLPCGHDFHSDCLDPWLEVKAECPLCKAPAFTKSRDRDEVAHGRAVHAINSSAIAQAPPLFRSRSPDESRGSQLDGRPRTEGGVDGGMPPVKPSSPLPPESSARSTQVGANQEERSLPIERAGESERTPLQARVLEGIQQTGEVVPVRPDWDARGESKMADFTADGQPLAAGHNIAPDTAAAGIGAPIASAVLGSRPLDVGEAAVTARAGSKAADSCANRQGNELGISSSESNIPPSSERGVKTTGVAQPRAAPGFGREEVSLDELETGQVGTGKGRGIADVATDGFSAPMGS 448
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BLAST of mRNA_E-siliculosus-1a_M_contig82.16387.1 vs. uniprot
Match: A0A6H5KUT0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUT0_9PHAE)

HSP 1 Score: 488 bits (1255), Expect = 4.440e-169
Identity = 261/308 (84.74%), Postives = 272/308 (88.31%), Query Frame = 0 
Query:  183 VIKVLPCDHDFHSDCLDPWLEVKAECPLCK--APAFTKSRDRDEVAHGRAVHAINSSAVAQAPPLFRSRSRDESGGSQLDGRPRTEEGVDGGMLPVRPSSPLPPESSARSTQVGTNQEERSLPIERAGERTPEQARVLEGIQQTGEVVPVRPDWDARGESKMADFAADGQPLAAEHNISLDTAAAGVGAPNEPAVVGSRPLDVGDPAVTASAGSKAADGCADRQGNELGITSSESNIPPSFERGVNTTGVAQPRAAPGFGREEVSLDELETGQVGTGKGRGIADVATDGFSAVLAADGYGLSVDQAVL 488
            +IKVLPC HDFHSDCLDPWLEVKAECPLCK  APAF KSR RDEVAHGRAVHAINSSA+AQAPPL RSRSR  S GSQLDGR R E  VDGGMLP+RPSSPLPPESSARST VG  QEERSLPIERAGERTPEQARVLEG QQTGEVVP RPDWDA GESKMADFAADGQPLAAEHNI+LDTAA G+G P E AVVGSRPLDVG+ AVTASAG KAADGCADRQGNELG+ SSESN+P   E GVNTTGVAQP AAPGFGREEV LDELETGQVGTGKGRGIA+VAT GFSAV+A DG  +SVDQAVL
Sbjct:    5 LIKVLPCGHDFHSDCLDPWLEVKAECPLCKVPAPAFIKSRHRDEVAHGRAVHAINSSAIAQAPPLLRSRSRHASRGSQLDGRRRREGKVDGGMLPMRPSSPLPPESSARSTHVGAIQEERSLPIERAGERTPEQARVLEGTQQTGEVVPGRPDWDAWGESKMADFAADGQPLAAEHNIALDTAATGIGPPVESAVVGSRPLDVGEAAVTASAGGKAADGCADRQGNELGMASSESNVPQRAESGVNTTGVAQPPAAPGFGREEVPLDELETGQVGTGKGRGIANVATCGFSAVVAKDGCDVSVDQAVL 312
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BLAST of mRNA_E-siliculosus-1a_M_contig82.16387.1 vs. uniprot
Match: A0A3F2RQ68_9STRA (RING-type domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RQ68_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 2.460e-11
Identity = 25/53 (47.17%), Postives = 39/53 (73.58%), Query Frame = 0 
Query:  164 DSASPITCAICLAAYQEEEVIKVLPCDHDFHSDCLDPWLEVKAECPLCKAPAF 216
            +++   +CA+CL A+Q +  ++++PC H FH DC+DPWL+ KA CP+CK PA 
Sbjct:   73 EASENASCAVCLNAFQVDARVRMMPCFHHFHPDCIDPWLQEKASCPVCKFPAI 125
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BLAST of mRNA_E-siliculosus-1a_M_contig82.16387.1 vs. uniprot
Match: A0A2V3IFI0_9FLOR (RING finger protein 44 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFI0_9FLOR)

HSP 1 Score: 70.1 bits (170), Expect = 1.090e-10
Identity = 27/51 (52.94%), Postives = 36/51 (70.59%), Query Frame = 0 
Query:  166 ASPITCAICLAAYQEEEVIKVLPCDHDFHSDCLDPWLEVKAECPLCKAPAF 216
            +SP  CAICLA YQ  E ++ LPC+H FH+ C+D WL  +  CP+CKA A+
Sbjct:   99 SSPHKCAICLAPYQPRETVRRLPCNHPFHAQCVDLWLNKRNSCPICKAHAY 149
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BLAST of mRNA_E-siliculosus-1a_M_contig82.16387.1 vs. uniprot
Match: UPI001EB08A28 (E3 ubiquitin-protein ligase ZNRF3-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EB08A28)

HSP 1 Score: 75.1 bits (183), Expect = 1.420e-10
Identity = 30/48 (62.50%), Postives = 38/48 (79.17%), Query Frame = 0 
Query:  165 SASPITCAICLAAYQEEEVIKVLPCDHDFHSDCLDPWLEVKAECPLCK 212
            S++  +CAICL  YQEE+V++VLPC+HDFH  C+DPWL  K  CPLCK
Sbjct:  256 SSASESCAICLEGYQEEQVLRVLPCNHDFHRICVDPWLLNKGTCPLCK 303
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BLAST of mRNA_E-siliculosus-1a_M_contig82.16387.1 vs. uniprot
Match: A0A3R7KYN5_9STRA (RING-type domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KYN5_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.490e-10
Identity = 25/53 (47.17%), Postives = 39/53 (73.58%), Query Frame = 0 
Query:  164 DSASPITCAICLAAYQEEEVIKVLPCDHDFHSDCLDPWLEVKAECPLCKAPAF 216
            +++   +CA+CL A+Q +  ++++PC H FH DC+DPWL+ KA CP+CK PA 
Sbjct:  139 EASENASCAVCLNAFQVDARVRMMPCFHRFHPDCIDPWLQEKASCPVCKFPAI 191
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig82.16387.1 vs. uniprot
Match: A0A1A9V9E2_GLOAU (RING-type domain-containing protein n=1 Tax=Glossina austeni TaxID=7395 RepID=A0A1A9V9E2_GLOAU)

HSP 1 Score: 68.6 bits (166), Expect = 2.450e-10
Identity = 26/53 (49.06%), Postives = 37/53 (69.81%), Query Frame = 0 
Query:  164 DSASPITCAICLAAYQEEEVIKVLPCDHDFHSDCLDPWLEVKAECPLCKAPAF 216
            D  +  +CA+CL  +Q  EVI+ LPC HDFH DC+D WL+++  CP+C+A  F
Sbjct:   77 DDGNEKSCAVCLNDFQLNEVIRKLPCAHDFHVDCVDKWLKLRRTCPMCRACVF 129
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BLAST of mRNA_E-siliculosus-1a_M_contig82.16387.1 vs. uniprot
Match: A0A8C4X9G5_ERPCA (RING-type domain-containing protein n=1 Tax=Erpetoichthys calabaricus TaxID=27687 RepID=A0A8C4X9G5_ERPCA)

HSP 1 Score: 68.2 bits (165), Expect = 4.780e-10
Identity = 31/84 (36.90%), Postives = 48/84 (57.14%), Query Frame = 0 
Query:  164 DSASPITCAICLAAYQEEEVIKVLPCDHDFHSDCLDPWLEVKAECPLCKAPAFTKSRDRDEVAHGRAVHAINSSAVAQAPPLFR 247
            ++ S  TC++CLAA+ E ++++ LPC H+FH +C D WL   + CP+C+ P FT S       +   +H     A+   PP FR
Sbjct:   48 ENNSVTTCSVCLAAFIEGDILRNLPCSHEFHMNCSDQWLSKNSTCPICR-PNFTASAQLLHPVYDANLHP----ALQAGPPTFR 126
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BLAST of mRNA_E-siliculosus-1a_M_contig82.16387.1 vs. uniprot
Match: A0A6I9YLF3_9SAUR (RING finger protein 215-like n=2 Tax=Thamnophis TaxID=34999 RepID=A0A6I9YLF3_9SAUR)

HSP 1 Score: 65.9 bits (159), Expect = 5.470e-10
Identity = 24/43 (55.81%), Postives = 33/43 (76.74%), Query Frame = 0 
Query:  170 TCAICLAAYQEEEVIKVLPCDHDFHSDCLDPWLEVKAECPLCK 212
            +CAICL  +Q  + ++VLPC H+FH DC+DPWL ++  CPLCK
Sbjct:   28 SCAICLDQFQRNQCLRVLPCLHEFHRDCVDPWLLLQQTCPLCK 70
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BLAST of mRNA_E-siliculosus-1a_M_contig82.16387.1 vs. uniprot
Match: A0A2T7PHL4_POMCA (RING-type E3 ubiquitin transferase n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7PHL4_POMCA)

HSP 1 Score: 72.4 bits (176), Expect = 6.890e-10
Identity = 26/44 (59.09%), Postives = 34/44 (77.27%), Query Frame = 0 
Query:  170 TCAICLAAYQEEEVIKVLPCDHDFHSDCLDPWLEVKAECPLCKA 213
            +CAICL  Y E ++++VLPCDH+FH  C+DPWLE    CPLCK+
Sbjct:  278 SCAICLDGYHEGQILRVLPCDHEFHRTCVDPWLEAHGTCPLCKS 321
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig82.16387.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ38_ECTSI1.590e-26492.41RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KUT0_9PHAE4.440e-16984.74RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A3F2RQ68_9STRA2.460e-1147.17RING-type domain-containing protein n=1 Tax=Phytop... [more]
A0A2V3IFI0_9FLOR1.090e-1052.94RING finger protein 44 n=1 Tax=Gracilariopsis chor... [more]
UPI001EB08A281.420e-1062.50E3 ubiquitin-protein ligase ZNRF3-like n=2 Tax=Hal... [more]
A0A3R7KYN5_9STRA1.490e-1047.17RING-type domain-containing protein n=2 Tax=Phytop... [more]
A0A1A9V9E2_GLOAU2.450e-1049.06RING-type domain-containing protein n=1 Tax=Glossi... [more]
A0A8C4X9G5_ERPCA4.780e-1036.90RING-type domain-containing protein n=1 Tax=Erpeto... [more]
A0A6I9YLF3_9SAUR5.470e-1055.81RING finger protein 215-like n=2 Tax=Thamnophis Ta... [more]
A0A2T7PHL4_POMCA6.890e-1059.09RING-type E3 ubiquitin transferase n=1 Tax=Pomacea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 171..211
e-value: 8.5E-8
score: 41.9
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 170..212
e-value: 1.2E-11
score: 44.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 171..212
score: 12.711
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 150..222
e-value: 1.1E-18
score: 68.2
NoneNo IPR availablePANTHERPTHR45977FAMILY NOT NAMEDcoord: 67..213
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..80
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 81..488
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..57
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 164..218
NoneNo IPR availableTMHMMTMhelixcoord: 58..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig82contigE-siliculosus-1a_M_contig82:268617..273085 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig82.16387.1mRNA_E-siliculosus-1a_M_contig82.16387.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig82 267090..273260 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig82.16387.1 ID=prot_E-siliculosus-1a_M_contig82.16387.1|Name=mRNA_E-siliculosus-1a_M_contig82.16387.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=489bp
MCSSSTCQGCARDDGCGWCNGPNAVTSGECMALDDDASCSSGVMLLEVDE
CPSVGADIIFKNITGMLGAMVGVALLLNVFNRVSNRRRSRKLKKSIFTLP
VYVYNSSTRERAKAARKARPQLQAPLDSSQGIEDVGSARSSSSSPSAPVA
PSSTRSRSSSEDSDSASPITCAICLAAYQEEEVIKVLPCDHDFHSDCLDP
WLEVKAECPLCKAPAFTKSRDRDEVAHGRAVHAINSSAVAQAPPLFRSRS
RDESGGSQLDGRPRTEEGVDGGMLPVRPSSPLPPESSARSTQVGTNQEER
SLPIERAGERTPEQARVLEGIQQTGEVVPVRPDWDARGESKMADFAADGQ
PLAAEHNISLDTAAAGVGAPNEPAVVGSRPLDVGDPAVTASAGSKAADGC
ADRQGNELGITSSESNIPPSFERGVNTTGVAQPRAAPGFGREEVSLDELE
TGQVGTGKGRGIADVATDGFSAVLAADGYGLSVDQAVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING