prot_E-siliculosus-1a_M_contig82.16384.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig82.16384.1
Unique Nameprot_E-siliculosus-1a_M_contig82.16384.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length314
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig82.16384.1 vs. uniprot
Match: D8LQ41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ41_ECTSI)

HSP 1 Score: 538 bits (1387), Expect = 4.920e-192
Identity = 293/313 (93.61%), Postives = 295/313 (94.25%), Query Frame = 0
Query:    1 MYVCVSICCTIHIIIDDSDEDEEGDDYELDYASLNANPELLRMLGASERVIAAKEAEVSAIVSTWAPPPEPGLENSTTIIADSGAVVLGSGKAPCGSGVARESKPVGGFDQGAAAAAATAQEAPVWKVSSKDESWDEASANGHAWWESGSEDEEYEMMSAMSPNLQAVLGLRRPSGIDTANAEQGDNKNEWHPPSFAGLNNSRRVKVLRPLVVGHGKMFDVEYRNRGXXXXXXXXXXXXXXXXXXXXGWDYQGITFKAIRRTCQKTTTIRTYVSGAPTYLRTSRGLWDAQARWNRKRRRCRNNYLGKLRRRLV 313
            MYVCVSICCTIHI+IDD DEDEEGDDYELDYASLNANPELLRMLGASERVIAAKEAEVSAIVSTWAPPPEPGLENSTTIIADS AVVLGSGKAPCGSGVAR SK VGGFDQ AAAAAATAQEAP WKVSSKDESWDEASAN HAWWESGSEDEEYEMMSAMSPNLQAVLGLRRPSG DTANAEQGDNKNEWHPPSFAGL+NSRRV VLRPLVVGHGKMFDVEYRNRG  XXXXXXXXXXXXX     GWDYQGITFKAIRRTCQKTTTIRT  SGAPTYLRTSRGLWDAQARWNRKRRRCRNNYLGKLRRRLV
Sbjct:    1 MYVCVSICCTIHILIDDRDEDEEGDDYELDYASLNANPELLRMLGASERVIAAKEAEVSAIVSTWAPPPEPGLENSTTIIADSAAVVLGSGKAPCGSGVARVSKLVGGFDQDAAAAAATAQEAPGWKVSSKDESWDEASANRHAWWESGSEDEEYEMMSAMSPNLQAVLGLRRPSGTDTANAEQGDNKNEWHPPSFAGLSNSRRVTVLRPLVVGHGKMFDVEYRNRGQQXXXXXXXXXXXXXLSEGEGWDYQGITFKAIRRTCQKTTTIRTCGSGAPTYLRTSRGLWDAQARWNRKRRRCRNNYLGKLRRRLV 313          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16384.1 vs. uniprot
Match: D8LQ40_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ40_ECTSI)

HSP 1 Score: 189 bits (479), Expect = 1.120e-53
Identity = 119/259 (45.95%), Postives = 147/259 (56.76%), Query Frame = 0
Query:   27 YELDYASLNANPELLRMLGASERVIAAKEAEVSAIVSTWAPPPEPGLENSTTIIADSGAVVLGSGKAPCGSGVARESKPVGGFDQGAAAAAATAQEAPVWKVS----------------------------SKDESWDEASA-NGHAWWESGSEDEEYEMMSAMSPNLQAVLGLRRPSGIDTANAEQG-DNKNEWHPPSFAGLNNSRRVKVLRPLVVGHGKMFDVEYRNR-GXXXXXXXXXXXXXXXXXXXXGWDYQGI 254
            YE+DYAS+N +PE+LRMLGASE VIAAKEAEVS + STW PP E GLE+S+ I ADS AV +G   AP G GV R  K VG FD+ A  AAA  + APV KV                               ++SWDEASA +GHAWWESGS+DEE E  +AMS NL+  LGL     + TA    G D   +W PPSFAGL+NS+ +  L PLV+G  K  ++EY+ + G                    GWDY+ +
Sbjct:   48 YEVDYASMNVSPEILRMLGASEEVIAAKEAEVSGVTSTWVPPTETGLEHSSAI-ADSAAVAIGGSGAPGGGGVERVFKAVGSFDKDAEDAAAAGERAPVLKVKVAHAPEPVPKKRESKLPPKSEDSWSDDDGSEDSWDEASAIDGHAWWESGSDDEELET-AAMSHNLRVALGLATAGEVATAETGSGGDGNGDWRPPSFAGLDNSKPLTTLMPLVIGQQKGLEIEYKKKMGEGEAEGGEGGDGDEEWSEEEGWDYEDV 304          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16384.1 vs. uniprot
Match: A0A6H5JS46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS46_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 4.290e-51
Identity = 106/122 (86.89%), Postives = 112/122 (91.80%), Query Frame = 0
Query:  131 KDESWDEASANGHAWWESGSEDEEYEMMSAMSPNLQAVLGLRRPSGIDTANAEQGDNKNEWHPPSFAGLNNSRRVKVLRPLVVGHGKMFDVEYRNRGXXXXXXXXXXXXXXXXXXXXGWDYQ 252
            +++SWDEASANGHAWW+SGSEDEEYE+MSAMSPNLQAVLGLRRPSGID  N EQGDNKNEW PPSFAGLNNS RVKVLRPLVVGHGKM +VE RNR XXXXXXXXXXXXXXXXXX  GWDYQ
Sbjct:   59 ENDSWDEASANGHAWWDSGSEDEEYEIMSAMSPNLQAVLGLRRPSGIDPPNEEQGDNKNEWQPPSFAGLNNSTRVKVLRPLVVGHGKMLEVECRNRXXXXXXXXXXXXXXXXXXXGEGWDYQ 180          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig82.16384.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LQ41_ECTSI4.920e-19293.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LQ40_ECTSI1.120e-5345.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JS46_9PHAE4.290e-5186.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig82contigE-siliculosus-1a_M_contig82:245186..248622 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig82.16384.1mRNA_E-siliculosus-1a_M_contig82.16384.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig82 245186..249755 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig82.16384.1 ID=prot_E-siliculosus-1a_M_contig82.16384.1|Name=mRNA_E-siliculosus-1a_M_contig82.16384.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=314bp
MYVCVSICCTIHIIIDDSDEDEEGDDYELDYASLNANPELLRMLGASERV
IAAKEAEVSAIVSTWAPPPEPGLENSTTIIADSGAVVLGSGKAPCGSGVA
RESKPVGGFDQGAAAAAATAQEAPVWKVSSKDESWDEASANGHAWWESGS
EDEEYEMMSAMSPNLQAVLGLRRPSGIDTANAEQGDNKNEWHPPSFAGLN
NSRRVKVLRPLVVGHGKMFDVEYRNRGRQEEEEGGDGDGDDDSSEGEGWD
YQGITFKAIRRTCQKTTTIRTYVSGAPTYLRTSRGLWDAQARWNRKRRRC
RNNYLGKLRRRLV*
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