prot_E-siliculosus-1a_M_contig81.16347.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig81.16347.1
Unique Nameprot_E-siliculosus-1a_M_contig81.16347.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length289
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig81.16347.1 vs. uniprot
Match: D7G6R0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R0_ECTSI)

HSP 1 Score: 434 bits (1117), Expect = 3.960e-152
Identity = 246/268 (91.79%), Postives = 252/268 (94.03%), Query Frame = 0 
Query:   21 MYRRFGEVQGIFDEDHYRILTDALSRVKKRSEPLYGRLSSVYDMAKSVRTKKMTRGQLRTVLDRHLETFVTEEDXXXXXXXXXXXXXXXXXXXXGGGLSDDDAETVIDENVNGRKGNRDTDVRAWXXXXXXXXXXXXARTRSLMQGYLPLSKRRWQRSANFTIPHGYCDKTYWGLTFRNTVRGDVDAAIQRRPPTLVTECPRDTRICFARQLDNYVQLKKVLVDGRGRVFRAPDKDIKRALAIIDGMPKNVSVSEYILSVKEMFRVRG 288
            MYRRFGEVQGIFDEDHYRILTDALSRVKKRSEPLYGRLSSVYDM KSVRTKKMTRGQLRTVLDRHLETFVTEE+  XXXXXXXXXXXXX     GG LSD+DAETVIDENVNGRKGNRDTDV AW XXXXXXXXXX ARTRSLMQGYLPLSKRRW +SANFTIPHGYCDKTYWGLTFRNTVRGDVD AIQRRPPTLVTECPR+TRICFARQLDNYVQLKKVLVD RGRVFRAPDKDIKRALAII GMPKN+SVSEY+LSVKEMFRVRG
Sbjct:    1 MYRRFGEVQGIFDEDHYRILTDALSRVKKRSEPLYGRLSSVYDMTKSVRTKKMTRGQLRTVLDRHLETFVTEEEREXXXXXXXXXXXXX-----GGELSDEDAETVIDENVNGRKGNRDTDVTAWNXXXXXXXXXXKARTRSLMQGYLPLSKRRWLKSANFTIPHGYCDKTYWGLTFRNTVRGDVDEAIQRRPPTLVTECPRNTRICFARQLDNYVQLKKVLVDRRGRVFRAPDKDIKRALAIIGGMPKNMSVSEYVLSVKEMFRVRG 263
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BLAST of mRNA_E-siliculosus-1a_M_contig81.16347.1 vs. uniprot
Match: D7G6R1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R1_ECTSI)

HSP 1 Score: 383 bits (984), Expect = 1.740e-131
Identity = 223/303 (73.60%), Postives = 245/303 (80.86%), Query Frame = 0 
Query:    1 MEPVSVRDSGDVLTLGHIGDMYRRFGEVQGIFDEDHYRILTDALSRVKKRSEPLYGRLSSVYDMAKSVRTKKMTRGQLRTVLDRHLETFVTEEDXXXXXXXXXXXXXXXXXXXXG---------------GGLSDDDAETVIDENVNGRKGNRDTDVRAWXXXXXXXXXXXXARTRSLMQGYLPLSKRRWQRSANFTIPHGYCDKTYWGLTFRNTVRGDVDAAIQRRPPTLVTECPRDTRICFARQLDNYVQLKKVLVDGRGRVFRAPDKDIKRALAIIDGMPKNVSVSEYILSVKEMFRVRG 288
            MEP SVR+SGD LTLGHI DMYR+FGEVQGIFDE+HYRILTDALSRVK+RSEPLY RLS+VY MA+SVR  +MTRGQLRTVLDRHL TF TE+ XXXXXXXXXXXXXXXXXXXX                G LSD+DAETVIDENV GRKGNRDT+V+A              R RSLM  + PLSK RW +SA+FT+PHGYCDK YWGLTFRNTVRGD+ AA+QR+PPT+  ECP + R  FARQLDNYVQLKKVLVDGRGRVFRAPDKD+KRALA IDGMPKN+SVSEYILSV EMFRVRG
Sbjct:    1 MEPASVRNSGDNLTLGHISDMYRKFGEVQGIFDENHYRILTDALSRVKRRSEPLYDRLSNVYLMAESVRNMEMTRGQLRTVLDRHLATFATEDXXXXXXXXXXXXXXXXXXXXXXXREAXXXXXXXXXXXGELSDEDAETVIDENVIGRKGNRDTEVKA--------------RARSLMHDHDPLSKMRWPKSADFTVPHGYCDKMYWGLTFRNTVRGDIRAAVQRKPPTVTAECPYELRKWFARQLDNYVQLKKVLVDGRGRVFRAPDKDVKRALATIDGMPKNMSVSEYILSVTEMFRVRG 289
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BLAST of mRNA_E-siliculosus-1a_M_contig81.16347.1 vs. uniprot
Match: A0A6H5KBA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBA2_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 4.420e-24
Identity = 49/59 (83.05%), Postives = 54/59 (91.53%), Query Frame = 0 
Query:  230 RQLDNYVQLKKVLVDGRGRVFRAPDKDIKRALAIIDGMPKNVSVSEYILSVKEMFRVRG 288
            RQLDNY+QLKKVLVDG+G  FRAPDKDIKRA+A I+GMPKN+SVSEYIL VK MFRVRG
Sbjct:    2 RQLDNYIQLKKVLVDGKGTGFRAPDKDIKRAIATINGMPKNMSVSEYILFVKAMFRVRG 60
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig81.16347.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G6R0_ECTSI3.960e-15291.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G6R1_ECTSI1.740e-13173.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KBA2_9PHAE4.420e-2483.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 86..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig81contigE-siliculosus-1a_M_contig81:546494..553748 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig81.16347.1mRNA_E-siliculosus-1a_M_contig81.16347.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig81 546401..555339 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig81.16347.1 ID=prot_E-siliculosus-1a_M_contig81.16347.1|Name=mRNA_E-siliculosus-1a_M_contig81.16347.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=289bp
MEPVSVRDSGDVLTLGHIGDMYRRFGEVQGIFDEDHYRILTDALSRVKKR
SEPLYGRLSSVYDMAKSVRTKKMTRGQLRTVLDRHLETFVTEEDEEEREA
EEEDEDEDEEEQEEGGGLSDDDAETVIDENVNGRKGNRDTDVRAWNGRKG
NRDADVKARTRSLMQGYLPLSKRRWQRSANFTIPHGYCDKTYWGLTFRNT
VRGDVDAAIQRRPPTLVTECPRDTRICFARQLDNYVQLKKVLVDGRGRVF
RAPDKDIKRALAIIDGMPKNVSVSEYILSVKEMFRVRG*
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