prot_E-siliculosus-1a_M_contig81.16343.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig81.16343.1
Unique Nameprot_E-siliculosus-1a_M_contig81.16343.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length442
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig81.16343.1 vs. uniprot
Match: D7G6R3_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R3_ECTSI)

HSP 1 Score: 132 bits (332), Expect = 1.140e-29
Identity = 237/315 (75.24%), Postives = 241/315 (76.51%), Query Frame = 0 
Query:  127 KRMVGGGNSNSGGGDQGAMSFSGSQVTVGEFIVETKTTPGVGSREEEEGXXXXXXXXXXXXXXXXXXVGQESARRGKRKLEGKGKASRRQSIPAAGRXXXXXXXXXXXXXXXXXXXXXXPATSKRSGGTGSAAPSKTASLGISNRNTARCRGKGRAICQEPGCTTQATFGKKGTKKPEFCVKHVKHGMVDVRNKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTRTKAEFCQKHTRATKVNTRLPWRPES 441
            + MVGGGNSNSGGGDQGAMSFSGSQV  GEF VETKTTPGVGSREE E XXXXXXXXXXXXXXXXXX                               XXXXXXXXXXXXXXXXXXXXX              PSKT     S RN AR RG+GR +CQEPGCTTQ TFG KG+KKPEFC  H K  MVDV NK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTRTK EFC KH R  KVNTRLPWRPES
Sbjct:  395 RNMVGGGNSNSGGGDQGAMSFSGSQVKDGEFTVETKTTPGVGSREEAEXXXXXXXXXXXXXXXXXXXX------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKT-----SKRNNARRRGQGRPVCQEPGCTTQPTFGNKGSKKPEFCSPHAKPNMVDVHNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTRTKVEFCLKHARGKKVNTRLPWRPES 674
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BLAST of mRNA_E-siliculosus-1a_M_contig81.16343.1 vs. uniprot
Match: A0A6H5JY32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY32_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 2.290e-21
Identity = 128/181 (70.72%), Postives = 133/181 (73.48%), Query Frame = 0 
Query:  261 SKTASLGISNRNTARCRGKGRAICQEPGCTTQATFGKKGTKKPEFCVKHVKHGMVDVRNKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTRTKAEFCQKHTRATKVNTRLPWRPES 441
            S+T  L  S RNTAR RG+GR ICQEPGCTT  TFGKKG+KKPEFC+ H K  MVDV NK+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        XXXXXXXX                        RTRTKAEFCQKHTR  KVNTRLPWRPES
Sbjct:   16 SRTVLLPQSKRNTARRRGQGRPICQEPGCTTIPTFGKKGSKKPEFCLPHAKPNMVDVHNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGSNVRTRXXXXXXXXNTPFGVDG----------------RTRTKAEFCQKHTRGRKVNTRLPWRPES 180
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig81.16343.1 vs. uniprot
Match: A0A6H5JRU2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRU2_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 1.810e-8
Identity = 39/60 (65.00%), Postives = 43/60 (71.67%), Query Frame = 0 
Query:    1 MATAREELTATSEKLRLAFSSLKAVDDEVVAHTTNVGALPLSRATERVSKAASTVKTEVL 60
            M  ARE LT +SEKLRLAF+SL AVD E  A TT+VG LPLS AT RVS+AA   KT  L
Sbjct:   51 MEAARERLTDSSEKLRLAFASLHAVDGEFAARTTDVGTLPLSLATSRVSQAAGMAKTVAL 110
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig81.16343.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G6R3_ECTSI1.140e-2975.24EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JY32_9PHAE2.290e-2170.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRU2_9PHAE1.810e-865.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 97..117
NoneNo IPR availableCOILSCoilCoilcoord: 168..200

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig81contigE-siliculosus-1a_M_contig81:487520..493468 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig81.16343.1mRNA_E-siliculosus-1a_M_contig81.16343.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig81 487520..494282 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig81.16343.1 ID=prot_E-siliculosus-1a_M_contig81.16343.1|Name=mRNA_E-siliculosus-1a_M_contig81.16343.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=442bp
MATAREELTATSEKLRLAFSSLKAVDDEVVAHTTNVGALPLSRATERVSK
AASTVKTEVLKVLKVVEAVEAATVRAAAAVLVAQAAKAAAAAKSAAAKAA
VEAAEAAQAAAAALEADLDPLVVMVDKRMVGGGNSNSGGGDQGAMSFSGS
QVTVGEFIVETKTTPGVGSREEEEGEEEKEEEEEEEEEEKEDEVGQESAR
RGKRKLEGKGKASRRQSIPAAGRRRRNYAESSVRDSSKRRRTTSAPATSK
RSGGTGSAAPSKTASLGISNRNTARCRGKGRAICQEPGCTTQATFGKKGT
KKPEFCVKHVKHGMVDVRNKLCDHPGCPKHPSFGIDGTRKAEFCGTHRKQ
GMVDVTGKKCNHPGCIKFPSHGKDGSCKRELCQEHAAPGMVNVVRTRCGH
PGCTKFTPIGVDGRTRTKAEFCQKHTRATKVNTRLPWRPES*
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