prot_E-siliculosus-1a_M_contig81.16342.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig81.16342.1
Unique Nameprot_E-siliculosus-1a_M_contig81.16342.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length194
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig81.16342.1 vs. uniprot
Match: A0A6H5JRU2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRU2_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 7.780e-9
Identity = 35/52 (67.31%), Postives = 39/52 (75.00%), Query Frame = 0 
Query:    1 MATPREELTATSEKLRLAFSSLKAVDDEVVAHTTNVGALPLSRATERVSKAA 52
            M   RE LT +SEKLRLAF+SL AVD E  A TT+VG LPLS AT RVS+AA
Sbjct:   51 MEAARERLTDSSEKLRLAFASLHAVDGEFAARTTDVGTLPLSLATSRVSQAA 102
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig81.16342.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JRU2_9PHAE7.780e-967.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig81contigE-siliculosus-1a_M_contig81:526393..527628 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig81.16342.1mRNA_E-siliculosus-1a_M_contig81.16342.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig81 484672..527628 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig81.16342.1 ID=prot_E-siliculosus-1a_M_contig81.16342.1|Name=mRNA_E-siliculosus-1a_M_contig81.16342.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=194bp
MATPREELTATSEKLRLAFSSLKAVDDEVVAHTTNVGALPLSRATERVSK
AARTVKTEVLKVLKVVEAVEAATVRAAAAVSVAQAAKAAAAAKSAAAKAA
VEAAEAAHAAAAALEADLDPLVVVSDKRMPGGGNSGGADQGAMSLSASEV
MDGEFTVETKADESEISTHDGEGNDTPLTVEVMQGAGSTYQEPE
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