prot_E-siliculosus-1a_M_contig81.16315.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig81.16315.1
Unique Nameprot_E-siliculosus-1a_M_contig81.16315.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length515
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig81.16315.1 vs. uniprot
Match: A0A6H5K2S4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2S4_9PHAE)

HSP 1 Score: 887 bits (2291), Expect = 0.000e+0
Identity = 464/514 (90.27%), Postives = 475/514 (92.41%), Query Frame = 0
Query:    1 MVGVVAGRSLEGQNAARLAMTWKDRQRTRVPLLDLDDNPFCVERRTNEEWHMMQLNKNPSLVHLTSADVPRTASFMVDTKKPFRDFSRKKRNLLAWSLRTASASDAAAQATANKTHMPTRRLSTTVPSDLDGTDIGELFNMEQGVSGRVLHPTDSVEVDVDTLPTLEPYRREVVAQQPITFGHRPLSASRMFNPCTMATSCGIPSDGHHPSTGGIRGRKKGGGGHXXXXXXXRGRNSKPRRTTGLSAPMLKALLKGDTPTGEGGTALVTASQQQQEPFEPNGNIVSRDSAPKPNYLVLDGQEDLTDSSVNSEKIDESMWRSVDDLGRGEALGELEPWLQTSSQEGLGHGRRRLGNTKEGLELQRIFSSERPPWDGAPAPLPAPQHTRRAISSLLMPDPDERLRDKLIKSRKAAAGVPVTASSTKDEREQELRPFNPTPTGRWEVCPATPRAVIARQEIRRLSELREERDSAMAKKVRQAELSVLFKKIAPSEKLYRNTLQIAQERFRHQGTAAI 514
            MVG+ AGRSLEGQNAARLAMTWKDRQRTRVP++DLDDNPFCVERRTNEEWHMMQLNK                       KPFR+FSRKKRNLLAWS+R ASASDAAAQ+TANKTHMPTRRLSTTV SDLDGTDIGE FNME+G+SGRVLHPTD VEVDVDTLPTLEPYRREVVAQQPITFGHRPLSASRMFNPCTMATSCGIPSDGHHPSTGGIRGRKKGGGGHXXXXXXXRGRNSKPRRTTGLSAPMLKALL+GDTPTGEGG ALVTASQ QQE FEPNGNIVSRDSAPKPNYLVLDGQEDLTDSSVNSEK+DES WRSVDDLGRGEALGELE WLQTSS  GLGHGRRRLGNTKEG EL RIFSSERPPWDGAPAPLPAPQHTRRAISSLLMPDPDERLRDKLIKSRKAAAGVPVTASSTKDERE+ELRPFNPTP GRWEVCPATPRAVIARQEIRRLSELREERD AMAKKVRQAELSVLFKKIAPSEKLYRNTLQIAQERFRHQGTAAI
Sbjct:    1 MVGIAAGRSLEGQNAARLAMTWKDRQRTRVPVVDLDDNPFCVERRTNEEWHMMQLNK-----------------------KPFREFSRKKRNLLAWSIRAASASDAAAQSTANKTHMPTRRLSTTVRSDLDGTDIGEFFNMERGMSGRVLHPTDRVEVDVDTLPTLEPYRREVVAQQPITFGHRPLSASRMFNPCTMATSCGIPSDGHHPSTGGIRGRKKGGGGHXXXXXXXRGRNSKPRRTTGLSAPMLKALLRGDTPTGEGGAALVTASQHQQELFEPNGNIVSRDSAPKPNYLVLDGQEDLTDSSVNSEKLDESKWRSVDDLGRGEALGELESWLQTSSHSGLGHGRRRLGNTKEGQELHRIFSSERPPWDGAPAPLPAPQHTRRAISSLLMPDPDERLRDKLIKSRKAAAGVPVTASSTKDERERELRPFNPTPIGRWEVCPATPRAVIARQEIRRLSELREERDRAMAKKVRQAELSVLFKKIAPSEKLYRNTLQIAQERFRHQGTAAI 491          
BLAST of mRNA_E-siliculosus-1a_M_contig81.16315.1 vs. uniprot
Match: A0A8K1C8G0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8G0_PYTOL)

HSP 1 Score: 60.5 bits (145), Expect = 2.470e-6
Identity = 60/218 (27.52%), Postives = 90/218 (41.28%), Query Frame = 0
Query:    8 RSLEGQNAARLA--MTWKDRQRTRVPLLDLDDNPFCVERRTNEEWHMMQLNKNPSLVHLTSADVPRTASFMVDTKKPFR--DFSRKKRNLLAWS-----LRTASASDAAAQATANKTHMPTRRLSTTVPSDLDGTDIGELFNMEQGVSGRVLHPTDSVEVDVDTLPTLEPYRREVVAQQPITFGHRPLSASRMFNPCTMATSCGIPSDGHHPSTGGIR 216
            R    +NA  LA  ++   ++R RVP +D+D NPFCVER+  +E+ +   NKNP     T    P         K P     F     +++A S     +R    + +A   +          + +  PSDL         + E+          ++V V     P    Y       QP++FGHRP SASRM++P T   +    S G  PS   +R
Sbjct:   12 RKFHRENAHLLAPVVSTVHKKRVRVPRVDVDANPFCVERQLADEYALHNFNKNPRFYLNTIKQSPPRIE-----KNPHNHSSFINDAADMMASSGFSPRIRAEFTTPSAPSVSYKPMDYVAPSVISVDPSDLRSIPKNHPLSPEK----------NAVHVVSKFTPPTHAYYGSHKTTQPVSFGHRPDSASRMYDPLTSGLTTSRSSTGDGPSRTPVR 214          
BLAST of mRNA_E-siliculosus-1a_M_contig81.16315.1 vs. uniprot
Match: A0A024UA32_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UA32_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 6.320e-6
Identity = 59/213 (27.70%), Postives = 79/213 (37.09%), Query Frame = 0
Query:    8 RSLEGQNAARLAMTWKDRQRTRVPLLDLDDNPFCVERRTNEEWHMMQLNKNPSL-VHLTSADVPRTASFMVDTKKPFRDFSRKKRNLLAWSLRTASASDAAAQATANKTHMPTRRLSTTVPSDLDGTDIGELFNMEQGVSGRVLHPTDSVEVD--VDTLPTLEPYRREVVAQQPITFGHRPLSASRMFNPCTMATSCGIPSDGHHP--STGGI 215
            R L+      LA++   ++RTRVP +D DDNPFC +R+  ++  +   NKNP L    T    PRTA                                            P       VP         +  +    VS    H + S+       T  +  P + E V ++PITFGHRP SASR FNP T   +         P   TGGI
Sbjct:   20 RELKAMRKNELALSTLSKKRTRVPKID-DDNPFCTDRQLQDDIALAAFNKNPQLNAKRTPFTTPRTAQ------------------------------------------NPHNHTDIRVPPQRQPHVFHDANSSHVAVSFPAYHASISIAKPYAASTRRSSPPTQHEAV-KKPITFGHRPTSASRHFNPVTSELNASAAFAKKKPLRQTGGI 188          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig81.16315.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K2S4_9PHAE0.000e+090.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8K1C8G0_PYTOL2.470e-627.52Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024UA32_9STRA6.320e-627.70Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 454..474

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig81contigE-siliculosus-1a_M_contig81:213405..217828 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig81.16315.1mRNA_E-siliculosus-1a_M_contig81.16315.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig81 213405..217828 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig81.16315.1 ID=prot_E-siliculosus-1a_M_contig81.16315.1|Name=mRNA_E-siliculosus-1a_M_contig81.16315.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=515bp
MVGVVAGRSLEGQNAARLAMTWKDRQRTRVPLLDLDDNPFCVERRTNEEW
HMMQLNKNPSLVHLTSADVPRTASFMVDTKKPFRDFSRKKRNLLAWSLRT
ASASDAAAQATANKTHMPTRRLSTTVPSDLDGTDIGELFNMEQGVSGRVL
HPTDSVEVDVDTLPTLEPYRREVVAQQPITFGHRPLSASRMFNPCTMATS
CGIPSDGHHPSTGGIRGRKKGGGGHKGGSSRKRGRNSKPRRTTGLSAPML
KALLKGDTPTGEGGTALVTASQQQQEPFEPNGNIVSRDSAPKPNYLVLDG
QEDLTDSSVNSEKIDESMWRSVDDLGRGEALGELEPWLQTSSQEGLGHGR
RRLGNTKEGLELQRIFSSERPPWDGAPAPLPAPQHTRRAISSLLMPDPDE
RLRDKLIKSRKAAAGVPVTASSTKDEREQELRPFNPTPTGRWEVCPATPR
AVIARQEIRRLSELREERDSAMAKKVRQAELSVLFKKIAPSEKLYRNTLQ
IAQERFRHQGTAAI*
back to top