prot_E-siliculosus-1a_M_contig81.16304.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig81.16304.1
Unique Nameprot_E-siliculosus-1a_M_contig81.16304.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length448
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig81.16304.1 vs. uniprot
Match: D7FZE1_ECTSI (Beta-1,2-glucan production associated transmembrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE1_ECTSI)

HSP 1 Score: 535 bits (1378), Expect = 9.840e-185
Identity = 264/270 (97.78%), Postives = 266/270 (98.52%), Query Frame = 0
Query:  164 FREVFFPSATFFGKGIIRRTNYNELLLGYNPETHTTEEGTRLPRDIVSHDIIESSIMTCVKDSTLEIIEGFPGTCLEWHLRQSRWDRGDLILSKYLFAWSYGLPANFCSRFSNSSCIPFYRSFASRSTVHTGIFNARVIVIRPLVVLATLLYTNLGGNTMFLVVLGIYNLEILLIPFLVKLATTTSFYAVVLLTIHDVYIGAIDIYYGTARTIRALVSIACGVGGWSPFGDEGHSPLITMMQYSRCVLVELVVALCAAVWCIRESFDEQG 433
            FREVFFPSATFFGKGIIR T YNELLLGYNPET+TTEEGTRLPRDI+SHDIIESSIMTCVKDSTLEIIEGFPGTCLEWHLRQSRWDRGDLILSKYLFAWSYGLPANFCSRFS SSCIPFYRSFASRSTVHTG FNARVIVIRPLVVLATLLYTNLGGNTMFLVVLGIYNLEILLIPFLVKLATTTSFYAVVLLTIHDVYIGAIDIYYGTARTIRALVSIACGVGGWSPFGDEGHSPLITMMQYSRCVLVELVVALCAAVWCIRESFDEQG
Sbjct:  253 FREVFFPSATFFGKGIIRPTKYNELLLGYNPETYTTEEGTRLPRDILSHDIIESSIMTCVKDSTLEIIEGFPGTCLEWHLRQSRWDRGDLILSKYLFAWSYGLPANFCSRFSKSSCIPFYRSFASRSTVHTGTFNARVIVIRPLVVLATLLYTNLGGNTMFLVVLGIYNLEILLIPFLVKLATTTSFYAVVLLTIHDVYIGAIDIYYGTARTIRALVSIACGVGGWSPFGDEGHSPLITMMQYSRCVLVELVVALCAAVWCIRESFDEQG 522          
BLAST of mRNA_E-siliculosus-1a_M_contig81.16304.1 vs. uniprot
Match: D7G114_ECTSI (Glycosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G114_ECTSI)

HSP 1 Score: 467 bits (1201), Expect = 3.410e-157
Identity = 227/270 (84.07%), Postives = 244/270 (90.37%), Query Frame = 0
Query:  164 FREVFFPSATFFGKGIIRRTNYNELLLGYNPETHTTEEGTRLPRDIVSHDIIESSIMTCVKDSTLEIIEGFPGTCLEWHLRQSRWDRGDLILSKYLFAWSYGLPANFCSRFSNSSCIPFYRSFASRSTVHTGIFNARVIVIRPLVVLATLLYTNLGGNTMFLVVLGIYNLEILLIPFLVKLATTTSFYAVVLLTIHDVYIGAIDIYYGTARTIRALVSIACGVGGWSPFGDEGHSPLITMMQYSRCVLVELVVALCAAVWCIRESFDEQG 433
            FR VFFPSATFFGKG+IRRT YNELLLGYN +T+TTEEGTRLPRD+VSHDIIESSIMTC+KD TLEIIEGFPGTCLEWHLRQSRWDRGDLILSKYLFAWSYGLPANFCSRFSNSSCIPFY SFASRSTVHTG FN RVI IRPLVVLA LLY+NLGGN   L V  IY LEILL+PF+VK+ T TSF + + LT+HD+YIGAIDIYYGTARTIRALVSIA GVGGWSPFGDEGH+PLITM+ Y RCVLVELVVALC  +WCI+ESFDEQG
Sbjct:  307 FRSVFFPSATFFGKGVIRRTKYNELLLGYNCQTYTTEEGTRLPRDLVSHDIIESSIMTCIKDPTLEIIEGFPGTCLEWHLRQSRWDRGDLILSKYLFAWSYGLPANFCSRFSNSSCIPFYSSFASRSTVHTGTFNVRVIAIRPLVVLAILLYSNLGGNAR-LFVSEIYMLEILLVPFVVKIVTATSFSSGMFLTVHDMYIGAIDIYYGTARTIRALVSIAYGVGGWSPFGDEGHTPLITMLHYCRCVLVELVVALCLQIWCIKESFDEQG 575          
BLAST of mRNA_E-siliculosus-1a_M_contig81.16304.1 vs. uniprot
Match: A0A835YQP0_9STRA (Glyco_trans_2-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQP0_9STRA)

HSP 1 Score: 207 bits (526), Expect = 7.070e-55
Identity = 110/277 (39.71%), Postives = 169/277 (61.01%), Query Frame = 0
Query:  164 FREVFFPSATFFGKGIIRRTNYNELLLGYNPETHTTEEGTRLPRDIVSHDIIESSIMTCVKDSTLEIIEGFPGTCLEWHLRQSRWDRGDLILSKYLFAWSYGLPANFCSRFSNSSCIPFYRSFASR--STVHTGIFNARVIVIRPLVVLATLLYTNLGGNTMFLVVLGIY--------------NLEILLIPFLVKLATTT--SFYAVVLLTIHDVYIGAIDIYYGTARTIRALVSIACGVGGWSPFGDEGHSPLITMMQYSRCVLVELVVALCAAV 422
            ++ VF PSATF+GKGIIRR+ YN+ LLG++P+T  T+EG R+PRD++SHDIIESS+M  +    + + E FP T +EWHLRQ+RWD GD+I+SKYLF +++GL  N  SRFS      FY ++ ++  S V++  FN R I ++P V++  + +T L    + +  L I                ++I+L+PF+V +      ++   V+L IH +Y G +DI+YG+AR  R ++ +  G   W  F   G SP  TM+ + +   +EL++A  A V
Sbjct:  582 WKRVFIPSATFWGKGIIRRSTYNQTLLGWDPQTGLTKEGERIPRDLISHDIIESSVMKTMLAPEIAVYEDFPLTHVEWHLRQNRWDLGDIIISKYLFPFTFGLLPNLLSRFSFCHVRAFYAAYFAKMASAVYSSTFNIRCIYLKPAVLITMVTFTFLQSELLGMYYLAIVVNCLFCXXXXXXXXXVQIVLLPFVVSMMVVKGLTWKEKVMLQIHTIYFGVVDIFYGSARCARGMLKVITGNTKWRTFQSLGTSPWQTMVSFCKYTWMELLLAAAALV 858          
BLAST of mRNA_E-siliculosus-1a_M_contig81.16304.1 vs. uniprot
Match: A0A835YQ19_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ19_9STRA)

HSP 1 Score: 199 bits (506), Expect = 3.570e-52
Identity = 109/262 (41.60%), Postives = 163/262 (62.21%), Query Frame = 0
Query:  165 REVFFPSATFFGKGIIRRTNYNELLLGYNPETHTTEEGTRLPRDIVSHDIIESSIMTCVKDSTLEIIEGFPGTCLEWHLRQSRWDRGDLILSKYLFAWSYGLPANFCSRFSNSSCIPFYRSFASR--STVHTGIFNARVIVIRP--LVVLATLLYTNLGGNTMFLVVLGIYNLEILLIPFLVKLATTT--SFYAVVLLTIHDVYIGAIDIYYGTARTIRALVSIACGVGGWSPFGDEGHSPLITMMQYSRCVLVELVVALCA 420
            + VF PSA F+GKGIIRR++YN+ LLG+NP T  T E  R+PRD++SHDIIESS+M  +    + I E  P T +EWHLRQ RWD GD+I+SKYL+ ++YGL  N  + FS      FY ++  +  S V++  FN R I ++P  L V+A LL+ +     M+ +     N++I+L+PF+V +A     ++   +LL IH +Y+G +DIYYG+ R  RA+V +A  +  W  F     +P +T+    + + +EL+VA  A
Sbjct:  658 KRVFIPSAAFYGKGIIRRSSYNKTLLGWNPATGRTREEQRIPRDLISHDIIESSVMKTLLAPEISIFEDLPLTHVEWHLRQIRWDLGDIIISKYLYPFTYGLLPNLFTWFSYGQACAFYAAYFDKMASAVYSSTFNIRCIYLKPAVLAVMAALLFLHQQPIGMYGLA-AFVNVQIVLVPFIVSMAVVRRLTWKEKLLLQIHTIYMGVVDIYYGSWRCGRAMVKMATDMPRWRTFQSLSTTPCLTLATVFQLMRLELLVASAA 918          
BLAST of mRNA_E-siliculosus-1a_M_contig81.16304.1 vs. uniprot
Match: A0A836CJ01_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ01_9STRA)

HSP 1 Score: 134 bits (336), Expect = 4.060e-30
Identity = 87/293 (29.69%), Postives = 137/293 (46.76%), Query Frame = 0
Query:  165 REVFFPSATFFGKGIIRRTNYNELLLGYNPETHTTEEGTRLPRDIVSHDIIESSIMTCVKDSTLEIIEGFPGTCLEWHLRQSRWDR------GDLILSKYLFAWSYGLPANFCSRFSNSSCI---------------PFYRSF--ASRSTVHTGIFNARVIVIRPLVVLATLLYTNLGGNTMFLVVLGIYNLEILLIPFLVKLATTTSFYAVVLLTIHDVYIGAIDIYYGTARTIRALVSIACGVGGWSPFGDEGHSPLITMMQYSRCVLVELVVAL-CAAVWCIRESFDEQG 433
            + V+ P A F+GKGIIRR+ YN  LLG++P T  T+E   +PRD++SHDIIESS+M  +    + + E FP T +EWHLRQ+RW        G   +S      S     + C+ +++ S +                FY+ +   +R  +++  FN R I+++P V+ A   +  L   +                                   I+ VY+G +DI +G+ R  RAL  +      W  F   G +PL  M+ ++R   VEL +A+ C A+  +R    E+G
Sbjct:  299 KRVYIPCAAFYGKGIIRRSAYNITLLGWDPATGRTQEERNIPRDLISHDIIESSVMKTMLVPDITVYEEFPTTHVEWHLRQNRWGSAYGVTDGMWGISSVPILCSVSDDCHSCTVYASQSWLLDACYRGDHNHRRSRAFYQHYFAKARGAIYSSTFNLRCILLKPTVLFAMGAFAVLKTES-----------------------------------INTVYMGVVDIMFGSFRCFRALWKLCTRSTKWLTFESLGATPLQAMLVFTRAACVELAIAVGCLALLVLRGDIQERG 556          
BLAST of mRNA_E-siliculosus-1a_M_contig81.16304.1 vs. uniprot
Match: A0A836CCH0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCH0_9STRA)

HSP 1 Score: 117 bits (292), Expect = 7.100e-26
Identity = 52/96 (54.17%), Postives = 70/96 (72.92%), Query Frame = 0
Query:  165 REVFFPSATFFGKGIIRRTNYNELLLGYNPETHTTEEGTRLPRDIVSHDIIESSIMTCVKDSTLEIIEGFPGTCLEWHLRQSRWDRGDLILSKYLF 260
            + V+ P A F+GKGIIRR+ YN  LLG++P T  T+E   +PRD++SHDIIESS+M  +    + + E FP T +EWHLRQ+RWD GDLI+ KYL+
Sbjct:   87 KRVYIPCAAFYGKGIIRRSAYNITLLGWDPATGRTQEERNIPRDLISHDIIESSVMKTMLVPDITVYEEFPTTHVEWHLRQNRWDLGDLIIGKYLY 182          
BLAST of mRNA_E-siliculosus-1a_M_contig81.16304.1 vs. uniprot
Match: A0A835YZZ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZZ7_9STRA)

HSP 1 Score: 117 bits (292), Expect = 2.900e-25
Identity = 52/96 (54.17%), Postives = 70/96 (72.92%), Query Frame = 0
Query:  165 REVFFPSATFFGKGIIRRTNYNELLLGYNPETHTTEEGTRLPRDIVSHDIIESSIMTCVKDSTLEIIEGFPGTCLEWHLRQSRWDRGDLILSKYLF 260
            + V+ P A F+GKGIIRR+ YN  LLG++P T  T+E   +PRD++SHDIIESS+M  +    + + E FP T +EWHLRQ+RWD GDLI+ KYL+
Sbjct:  172 KRVYIPCAAFYGKGIIRRSAYNITLLGWDPATGRTQEERNIPRDLISHDIIESSVMKTMLVPDITVYEEFPTTHVEWHLRQNRWDLGDLIIGKYLY 267          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig81.16304.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FZE1_ECTSI9.840e-18597.78Beta-1,2-glucan production associated transmembran... [more]
D7G114_ECTSI3.410e-15784.07Glycosyltransferase n=1 Tax=Ectocarpus siliculosus... [more]
A0A835YQP0_9STRA7.070e-5539.71Glyco_trans_2-like domain-containing protein n=1 T... [more]
A0A835YQ19_9STRA3.570e-5241.60Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CJ01_9STRA4.060e-3029.69Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CCH0_9STRA7.100e-2654.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YZZ7_9STRA2.900e-2554.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 426..447
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 343..347
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 297..316
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 348..369
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 394..404
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 370..375
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 323..342
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 405..425
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 376..393
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..296
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 317..322
NoneNo IPR availableTMHMMTMhelixcoord: 344..366
NoneNo IPR availableTMHMMTMhelixcoord: 307..329

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig81contigE-siliculosus-1a_M_contig81:80975..83382 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig81.16304.1mRNA_E-siliculosus-1a_M_contig81.16304.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig81 80932..83806 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig81.16304.1 ID=prot_E-siliculosus-1a_M_contig81.16304.1|Name=mRNA_E-siliculosus-1a_M_contig81.16304.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=448bp
MKSCTRGRGRPLNRGTRCTQRMALCASTFGETGPSCTSTGRTSILSCCST
VTTGPAERTVLLCTRTPFHMMGPGALMPPPMLNTLRAISSLTVWSFSIRI
TSWERPSLSKRIHSTNEVTATSTSSSPPSSLPTSTPGRPMDLTPFTDPSP
WHLTIWAPRWPHLFREVFFPSATFFGKGIIRRTNYNELLLGYNPETHTTE
EGTRLPRDIVSHDIIESSIMTCVKDSTLEIIEGFPGTCLEWHLRQSRWDR
GDLILSKYLFAWSYGLPANFCSRFSNSSCIPFYRSFASRSTVHTGIFNAR
VIVIRPLVVLATLLYTNLGGNTMFLVVLGIYNLEILLIPFLVKLATTTSF
YAVVLLTIHDVYIGAIDIYYGTARTIRALVSIACGVGGWSPFGDEGHSPL
ITMMQYSRCVLVELVVALCAAVWCIRESFDEQGFSGDVFGVDHLVEL*
back to top