prot_E-siliculosus-1a_M_contig805.16300.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig805.16300.1
Unique Name	prot_E-siliculosus-1a_M_contig805.16300.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	216

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig805.16300.1 vs. uniprot
Match: D8LNE9_ECTSI (Ferredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNE9_ECTSI)

HSP 1 Score: 423 bits (1087), Expect = 1.100e-147
Identity = 211/215 (98.14%), Postives = 214/215 (99.53%), Query Frame = 0

Query:    1 MQSKPSLGIQLEEVARGGDGRGLVLVAGLEPGGNAEASGKICVGDTLCSAGIEGDMSRVEALDWDQTVSVLGSFAEESEIVLVIKRLLKRESINVQFELPSGSRDHDIKAGSNLRGEMIRLDVPVYDPRTKRFDQPYATGNCAGEGTCGTCFVEVQQGADLLTSPDQEELMLLSRGNLPVRWRLSCKVIVGKENKAGTVRLKAVPQAEWRSQARQ 215
            MQ KPSLG+QLEEVARGGDGRGLVLVAGLEPGGNAEASGKICVGDTLCSAGIEGDMSRVEALDWDQTVSVLGSFAEESEIVLVIKRL+KRESINVQFELPSGSRDH+IKAGSNLRGEMIRLDVPVYDPRTKRFDQPYATGNCAGEGTCGTCFVEVQQGADLLTSPDQEELMLLSRGNLPVRWRLSCKVIVGKENKAGTVRLKAVPQAEWRSQARQ
Sbjct:  123 MQRKPSLGMQLEEVARGGDGRGLVLVAGLEPGGNAEASGKICVGDTLCSAGIEGDMSRVEALDWDQTVSVLGSFAEESEIVLVIKRLVKRESINVQFELPSGSRDHEIKAGSNLRGEMIRLDVPVYDPRTKRFDQPYATGNCAGEGTCGTCFVEVQQGADLLTSPDQEELMLLSRGNLPVRWRLSCKVIVGKENKAGTVRLKAVPQAEWRSQARQ 337

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BLAST of mRNA_E-siliculosus-1a_M_contig805.16300.1 vs. uniprot
Match: A0A836CRA8_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRA8_9STRA)

HSP 1 Score: 209 bits (531), Expect = 5.050e-64
Identity = 109/202 (53.96%), Postives = 143/202 (70.79%), Query Frame = 0

Query:   21 RGLVLVAGLEPGGNAEASGKICVGDTLCSAGIEG--DMSRVEALDWDQTVSVLGSFAEESEIVLVIKRLLKRESINVQFELPS-----------GSRDHDIKAGSNLRGEMIRLDVPVYDPRTKRFDQPYATGNCAGEGTCGTCFVEVQQGADLLTSPDQEELMLLSRGNLPVRWRLSCKVIVGKENKAGTVRLKAVPQAEW 209
            RGLVL+   + GGNA  SG I  GDTL   G E   DM+RVE  D+D TV+ LG +A+ +EI LV+KRL++R+++ V FE P+           G +   + AGSNLR EMIR D+PVYD +T+RFDQPYATGNC GEG CGTCFVEVQ+GA+LL+ PD  E M++   NLP RWRLSC+ +VG +N+AG VRL+++PQ+ +
Sbjct:   78 RGLVLIG--DVGGNAAESGLINTGDTLTYVGNEAARDMTRVEGQDYDTTVAALGKYADLAEITLVLKRLVQRKTLEVTFETPTAYAEDGTAVEWGGQGVQMLAGSNLRSEMIRRDIPVYDAKTRRFDQPYATGNCGGEGICGTCFVEVQEGAELLSPPDGLENMVMR--NLPRRWRLSCRTVVGGKNEAGQVRLRSIPQSAY 275

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BLAST of mRNA_E-siliculosus-1a_M_contig805.16300.1 vs. uniprot
Match: A0A7S2V297_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V297_9STRA)

HSP 1 Score: 193 bits (491), Expect = 4.520e-59
Identity = 106/200 (53.00%), Postives = 136/200 (68.00%), Query Frame = 0

Query:   21 RGLVLVAGLEPGGNAEASGKICVGDTLCSAGIEGDMSR----VEALDWDQTVSVLG--SFAE-ESEIVLVIKRLLKRESINVQFELPSGS-RDHDIKAGSNLRGEMIRLDVP--VYDPRTKRFDQPYATGNCAGEGTCGTCFVEVQQGADLLTSPDQEELMLLSRGNLPVRWRLSCKVIVGKENKAGTVRLKAVPQAEWR 210
            RGLVLV  L PGGNA  S KI VGDTLC A      +R    +EA+D D T+  LG  SFA  + ++VL+ KRL+KRE +NV+  LP G  +   + +GSNLRGEMIR  +P  +YDP TKR+DQP+ TGNC GEG CGTC +EV  G ++L+  D  E MLL   N P+RWRLSC+  VG +NK+G+V+++AVPQ E R
Sbjct:    1 RGLVLVKDLAPGGNAALSAKIRVGDTLCRAADPTVGARSVVSLEAVDLDGTLQNLGALSFASRQKQLVLIFKRLVKREMVNVKIALPDGGEKTLQMLSGSNLRGEMIRQGLPEYIYDPETKRYDQPFITGNCGGEGICGTCLIEVMDGPEMLSEADNLENMLLE--NQPIRWRLSCRTFVGPDNKSGSVKVRAVPQKEMR 198

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BLAST of mRNA_E-siliculosus-1a_M_contig805.16300.1 vs. uniprot
Match: A0A7S4DIM7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DIM7_HETAK)

HSP 1 Score: 194 bits (492), Expect = 8.850e-58
Identity = 104/204 (50.98%), Postives = 135/204 (66.18%), Query Frame = 0

Query:    7 LGIQLEEVARGGDGRGLVLVAGLEPGGNAEASGKICVGDTLCSAGIE-GDMSRVEALDWDQTVSVLGSFAEESEIVLVIKRLLKRESINVQFELPSGSRDH-DIKAGSNLRGEMIRLDVPVYDPRTKRFDQPYATGNCAGEGTCGTCFVEVQQGADLLTSPDQEELMLLSRGNLPVRWRLSCKVIVGKENKAGTVRLKAVPQAE 208
            LG+ L E+  G DGRGLVLV  +  GGNA  +G+  VGD L   G E GDM+RVE LD+D T++ LG +A+   + LV KRL++R+ + V    P GS    ++ AGS LRGEM+R  + VYDP  KRFDQPY TGNC GEG CGTC V V +G +LL+ PD+ E M+L +   P R+RLSC+ IVG  N+ G V LK++P  E
Sbjct:  112 LGLGLSEMMAGRDGRGLVLVEDVAEGGNAATTGQFRVGDALSWVGEEPGDMTRVEGLDFDGTLAALGKYADREAVTLVAKRLVRRQPLEVTLIQPDGSEAKLEMLAGSVLRGEMLRQGLQVYDPSQKRFDQPYVTGNCGGEGLCGTCLVAVLEGKELLSLPDRVEAMVLEKR--PARYRLSCRTIVGVTNQPGKVVLKSMPTLE 313

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BLAST of mRNA_E-siliculosus-1a_M_contig805.16300.1 vs. uniprot
Match: A0A4D9CWU2_9STRA (PDZ domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWU2_9STRA)

HSP 1 Score: 171 bits (434), Expect = 2.060e-49
Identity = 101/221 (45.70%), Postives = 128/221 (57.92%), Query Frame = 0

Query:    7 LGIQLEEVARGGDGRGLVLVAGLEPGGNAEAS----GKICVGDTLCSAGIEG-DMSRVEALDWDQTVSVLGSFAEESE--IVLVIKRLLKRESINVQFELPSGSRDHD-----------IKAGSNLRGEMIRLDVPVYDPRTKRFDQPYATGNCAGEGTCGTCFVEVQQGADLLTSPDQEELMLLSRGNLPVRWRLSCKVIVGKENKAGTVRLKAVPQAEW 209
            +G+ LEE+ RG DGRG VLV+ L P GNA  +    GKI VGD +C  G E   M R E LD++QT+  L  F E     I LV+KRL+ R S++V      G  +             + AGS LR E++R  +PVY   T RFDQPY TGNC GEG CGTC V+V +G +LL   D+ E M+  +      WRLSC+VIVG  N  GTVR K +PQA +
Sbjct:   61 IGLGLEELRRGQDGRGCVLVSSLPPEGNAAQAAGDDGKIRVGDMICYLGQEPRGMVRTEGLDFEQTMGALRRFLETGAPAITLVLKRLVFRASLDVSLSYTPGPDEESQGRKAWTQTLPMLAGSQLRKELLRAGLPVYSQDTLRFDQPYVTGNCGGEGICGTCLVQVLEGKELLNEKDEVEAMVTRKWGA-ANWRLSCRVIVGATNTPGTVRFKLMPQAPF 280

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BLAST of mRNA_E-siliculosus-1a_M_contig805.16300.1 vs. uniprot
Match: A0A7R9YBT6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBT6_9STRA)

HSP 1 Score: 157 bits (397), Expect = 1.720e-43
Identity = 94/216 (43.52%), Postives = 131/216 (60.65%), Query Frame = 0

Query:    1 MQSKPSLGIQLEEVARGGD---GRGLVLVAGLEPGGNAEASG-KICVGDTLCS-AGIEGDMSRVEALDWDQTV-SVLGSFAEESEIVLVIKRLLKRESINVQFELPSGSRDH-DIKAGSNLRGEMIRLDVPVYDPRTKRFDQPYATGNCAGEGTCGTCFVEVQQGADLLTSPDQEELMLLSRGNLPVRWRLSCKVIVGKENKAGTVRLKAVPQAEW 209
            ++ KPSLGI L E+    D    R LVLV GLE  GNA A G  + VGD + + A   G     E  D+D  + +++G      E+ LV+ RL++R  + + +ELP+G R      AGSNLRG  ++  V +YD RT+RFD PYATG+CAGEG CGTC V V  G DLL+  D+ E  L+ +G  P+ WR +C+V VG +N+ GTV ++  PQ+ +
Sbjct:   97 VKRKPSLGIVLNEMVDASDPSADRALVLVGGLE--GNAAAEGVDLEVGDVITAIADGSGGYISTEGRDYDFLIDTIVGVDPGAEELTLVVNRLVERAMVTINYELPNGDRSSVQAPAGSNLRGIFLQEGVRLYDERTRRFDMPYATGDCAGEGLCGTCLVNVWSGEDLLSPADRNEA-LICKGR-PMGWRAACRVFVGADNQEGTVEVRLQPQSRF 308

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BLAST of mRNA_E-siliculosus-1a_M_contig805.16300.1 vs. uniprot
Match: A0A7S3P6U2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P6U2_9STRA)

HSP 1 Score: 151 bits (381), Expect = 2.030e-40
Identity = 91/215 (42.33%), Postives = 130/215 (60.47%), Query Frame = 0

Query:    5 PSLGIQLEEVARGGDGRGLVLVAGLEPGGNAE--ASGKICVGDTLCSAGI-EGDM-SRVEALDWDQTVSVLGSFAE-----ESEIVLVIKRLLKRESINVQFELPSGS-RDHDIKAGSNLRGEMIRLDVPVYDPRTKRFDQPYATGNCAGEGTCGTCFVEVQQGADLLTSPDQEELMLLSRGNLPVRWRLSCKVIVGKENKAGTVRLKAVPQAEW 209
            PSLG+ L E+A   DGRGLVLV+  E  GNA+   S  I VGD +      +G +  R   L++D+TV  +G   E     +  + L + RL+KR +I VQ   P  +    +  AG NLR  ++R D+ +Y+ +TKRFD PYATG+CAGEG CGTC V V +G DLL   D  E  L++RG  P+ WR SC+ +VG  N+ GT++++  PQ+++
Sbjct:  166 PSLGLVLTEMAGNKDGRGLVLVS--EVTGNAKNARSSPILVGDVITGVRTSDGSLRERTTGLNYDRTVEAVGDVKEAALKGDGTLHLELNRLVKRATIQVQVVQPGKNVTTIEALAGENLRRLLLRKDIRLYNRKTKRFDMPYATGDCAGEGLCGTCLVAVNEGMDLLNPKDGAE-ELITRGR-PLSWRASCRTVVGSNNEGGTIQVRVQPQSDF 376

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BLAST of mRNA_E-siliculosus-1a_M_contig805.16300.1 vs. uniprot
Match: B7G5I1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G5I1_PHATC)

HSP 1 Score: 139 bits (351), Expect = 1.000e-36
Identity = 87/209 (41.63%), Postives = 122/209 (58.37%), Query Frame = 0

Query:    7 LGIQLEEVARGGDGRGLVLVAGLEPGGNAEASGK-ICVGDTLCSAGIEGDM--SRVEALDWDQTVSVLGSFAEESE---IVLVIKRLLKRESINVQFELPSGS-RDHDIKAGSNLRGEMIRLDVPVYDPRTKRFDQPYATGNCAGEGTCGTCFVEVQQGADLLTSPDQEELMLLSRGNLPVRWRLSCKVIVGKENKAGTVRLKAVPQAE 208
            LG+ L E+A   DGRGLV+V+ +  G  A+A+ + I VGDT+        +   RV A ++D+TV  +G   E S    I L + RL+KR  + V+ +  SG  +  +  AG NLR   +R  + +YD RT+RFDQP+ TGNC G+G CGTC V V QG DLL   D  E+ + ++G  P  WR SC+  VG  N  GT+R+   PQ+E
Sbjct:   93 LGLVLTEMAGSPDGRGLVMVSKIT-GNAAKANPQAIHVGDTITGVMANDGVLKERVTAFNYDKTVEAIGRAKESSTDGTITLELNRLIKRLPVRVEIDDGSGHVQVIEALAGENLRRMFMRKQLKLYDERTRRFDQPFNTGNCGGDGVCGTCLVNVLQGMDLLNPKDSHEVFI-TKGR-PPSWRASCRTTVGFNNVGGTLRISLHPQSE 298

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BLAST of mRNA_E-siliculosus-1a_M_contig805.16300.1 vs. uniprot
Match: B8BQZ8_THAPS (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQZ8_THAPS)

HSP 1 Score: 85.1 bits (209), Expect = 2.640e-16
Identity = 48/139 (34.53%), Postives = 74/139 (53.24%), Query Frame = 0

Query:   76 EESEIVLVIKRLLKRESINVQFELPSGSR----DHDIKAGSNLRGEMIRLDVPVYDPRTKRFD-QPYATGNCAGEGTCGTCFVEVQQGADLLTSPDQEELMLLSRGNLPVRWRLSCKVIVGKENKAGTVRLKAVPQAEW 209
            EE+ ++L +KRL +R +INV+ + P           +  G NLR  ++   + + DP  +R+D +P  +GNC   G C TC V V +G +LL+ P   E  +L       RWRL+CK  VG   K G V ++  P+ +W
Sbjct:  141 EEATVILTLKRLRRRPTINVKLQYPPSQNLPPETIQLLPGDNLRMALLSRGIKLNDPLAQRYDGKPTGSGNCGSGGLCRTCAVSVTRGGELLSPPKANEKKMLEE---TPRWRLACKSWVGYGMKEGDVVVQVNPR-QW 275

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BLAST of mRNA_E-siliculosus-1a_M_contig805.16300.1 vs. uniprot
Match: A0A7S4FGR3_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FGR3_9EUGL)

HSP 1 Score: 71.2 bits (173), Expect = 6.150e-12
Identity = 54/166 (32.53%), Postives = 76/166 (45.78%), Query Frame = 0

Query:   31 PGGNAEASG--KICVGDTLCSAGIEGDMS-RVEALDWDQTVSVLGSFAEESEIVLVIKRLLKRESINVQFELPSGSRDHDIKAGSNLRGEMIRLDVPVYDPRTKRFDQPYATGNCAGEGTCGTCFVEVQQGADLLTSPDQEELMLLSRGNLPVRWRLSCKVIVGKE 193
            PGG A A G   +  GDT+ +          VE  D +  +  LG+ A +  IVL +KRL+ R +INV   +  GS    + AG NLR  +++    V+          +   +C G G C TC V+V +G D L+ P   E     R      WRLSC+   G E
Sbjct:    3 PGGAAAALGPTSLLPGDTIVAVSSPSTSPITVEGADLETILEALGTLAGQQNIVLRVKRLVHRSTINVNV-VDGGSLT--VIAGQNLRSALLKSGERVHK---------FEGEDCGGNGICTTCAVQVLEGEDALSPPTAAEKQ---RAKGREGWRLSCQTRAGAE 153

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig805.16300.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig805.16300.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LNE9_ECTSI	1.100e-147	98.14	Ferredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8L...	[more]
A0A836CRA8_9STRA	5.050e-64	53.96	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
A0A7S2V297_9STRA	4.520e-59	53.00	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7S4DIM7_HETAK	8.850e-58	50.98	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A4D9CWU2_9STRA	2.060e-49	45.70	PDZ domain-containing protein n=3 Tax=Monodopsidac...	[more]
A0A7R9YBT6_9STRA	1.720e-43	43.52	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
A0A7S3P6U2_9STRA	2.030e-40	42.33	Hypothetical protein n=1 Tax=Amphora coffeiformis ...	[more]
B7G5I1_PHATC	1.000e-36	41.63	Predicted protein n=2 Tax=Phaeodactylum tricornutu...	[more]
B8BQZ8_THAPS	2.640e-16	34.53	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
A0A7S4FGR3_9EUGL	6.150e-12	32.53	Hypothetical protein n=1 Tax=Eutreptiella gymnasti...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 140..190 e-value: 2.2E-4 score: 21.1
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 92..214 e-value: 2.0E-15 score: 58.3
None	No IPR available	GENE3D	2.30.42.10		coord: 1..91 e-value: 1.4E-5 score: 27.1
None	No IPR available	PANTHER	PTHR23426	FERREDOXIN/ADRENODOXIN	coord: 109..210
None	No IPR available	PANTHER	PTHR23426:SF27	PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 3, CHLOROPLASTIC	coord: 109..210
IPR001478	PDZ domain	PROSITE	PS50106	PDZ	coord: 1..86 score: 9.009
IPR036034	PDZ superfamily	SUPERFAMILY	50156	PDZ domain-like	coord: 4..89
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 141..196

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig805	contig	E-siliculosus-1a_M_contig805:3271..6139 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig805.16300.1	mRNA_E-siliculosus-1a_M_contig805.16300.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig805 1634..6160 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig805.16300.1 ID=prot_E-siliculosus-1a_M_contig805.16300.1|Name=mRNA_E-siliculosus-1a_M_contig805.16300.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=216bp
MQSKPSLGIQLEEVARGGDGRGLVLVAGLEPGGNAEASGKICVGDTLCSA
GIEGDMSRVEALDWDQTVSVLGSFAEESEIVLVIKRLLKRESINVQFELP
SGSRDHDIKAGSNLRGEMIRLDVPVYDPRTKRFDQPYATGNCAGEGTCGT
CFVEVQQGADLLTSPDQEELMLLSRGNLPVRWRLSCKVIVGKENKAGTVR
LKAVPQAEWRSQARQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036010	2Fe-2S_ferredoxin-like_sf
IPR036034	PDZ_sf
IPR001478	PDZ
IPR012675	Beta-grasp_dom_sf
IPR001041	2Fe-2S_ferredoxin-type