prot_E-siliculosus-1a_M_contig804.16299.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig804.16299.1
Unique Nameprot_E-siliculosus-1a_M_contig804.16299.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length344
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig804.16299.1 vs. uniprot
Match: A0A6H5JNU1_9PHAE (LRAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNU1_9PHAE)

HSP 1 Score: 610 bits (1572), Expect = 3.100e-219
Identity = 322/343 (93.88%), Postives = 329/343 (95.92%), Query Frame = 0
Query:    1 MGGEKESAAAAVQHTELMAEMEETFTDGTKGNDSTLGDNDPEVELQRWQQWRNVDLARTAAPPTGSSAQPIEVDCAGTADNNTALAGGGEEERAAGGPEGDAPVAAEEGETLWGHAVHEHELSAGDQIYVYRGVIQHHGIVTHVPVPGRAGGVRVVHFDSNCDGVESTSLETFLNGGTLRRATYGASAWSTGLDYGASYGCAADDPALIVTRATEAAKFGEGASGWSGYNLCTNNCETFAYWCSTGRRQVLSRQAARGLVGAGVVAAGASAVVSAGGFASAGAAATVLVPRGVRGVQRGVKAIEWATGVAVVAVAAADVVSTLVTRAPVERNLNLRSGSTVAS 343
            MGGEKE AAAAV+HTELM EMEE FTD TK NDSTLG N PE+ELQRWQQWRNVDLAR AAPPTGSSAQPIE+DC+GTADNNTALAGG +EERAAGGP GDAPVAA EGETLWGHAVHEHEL AGDQIYVYRGVIQHHGIVTHVPVPGR GGVRVVHFDSNCDGVESTSLETFLNGGTLRRATYGASAWSTGLDYGASYGCAADDPALIVTRATEAAKFGEGASGWSGYNLCTNNCETFAYWCSTGRRQVLSRQA RGLVGAGVVAAGASAVVSAGGFASAGAAATVLVPRG+RGVQRGVKAIEWATG+AVVAVAAADVVSTLVTRAPVERNLNLRSGSTVAS
Sbjct:    1 MGGEKEWAAAAVKHTELMVEMEEMFTDSTKDNDSTLGANAPELELQRWQQWRNVDLARIAAPPTGSSAQPIEIDCSGTADNNTALAGG-KEERAAGGPAGDAPVAAAEGETLWGHAVHEHELCAGDQIYVYRGVIQHHGIVTHVPVPGRVGGVRVVHFDSNCDGVESTSLETFLNGGTLRRATYGASAWSTGLDYGASYGCAADDPALIVTRATEAAKFGEGASGWSGYNLCTNNCETFAYWCSTGRRQVLSRQATRGLVGAGVVAAGASAVVSAGGFASAGAAATVLVPRGLRGVQRGVKAIEWATGLAVVAVAAADVVSTLVTRAPVERNLNLRSGSTVAS 342          
BLAST of mRNA_E-siliculosus-1a_M_contig804.16299.1 vs. uniprot
Match: D8LNF0_ECTSI (LRAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF0_ECTSI)

HSP 1 Score: 600 bits (1548), Expect = 1.820e-215
Identity = 313/325 (96.31%), Postives = 316/325 (97.23%), Query Frame = 0
Query:   18 MAEMEETFTDGTKGNDSTLGDNDPEVELQRWQQWRNVDLARTAAPPTGSSAQPIEVDCAGTADNNTALAGGGEEERAAGGPEGDAPVAAEEGETLWGHAVHEHELSAGDQIYVYRGVIQHHGIVTHVPVPGRAGGVRVVHFDSNCDGVESTSLETFLNGGTLRRATYGASAWSTGLDYGASYGCAADDPALIVTRATEAAKFGEGASGWSGYNLCTNNCETFAYWCSTGRRQVLSRQAARGLVGAGVVAAGASAVVSAGGFASAGAAATVLVPRGVRGVQRGVKAIEWATGVAVVAVAAADVVSTLVTRAPVERNLNLRSGSTVA 342
            MAEMEE FTD TK NDSTLG NDPE+ELQRWQQWRNVDLART APPTGSS QPIE+DCAGTADNNTALAGGGEEER AGGPEGDAPVAA EGETLWGHAVHEHELSAGDQ+YVYRGVIQHHGIVTHVPVPGRAGGVRVVHFDSNCDGVESTSLETFLNGGTLRRATYGASAWSTGLDYGASYGCA DDPALIVTRATEAAKFGEGASGWSGYNLCTNNCETFAYWCSTGRRQVLSRQAARGLVGAGVVAAGASAVVSAGGFASAGAAATVLVPRGVRGVQRGVKAIEWATGVAVVAVAAADVVSTLVTRAPVERNLNLRSGSTVA
Sbjct:    1 MAEMEEMFTDSTKDNDSTLGANDPELELQRWQQWRNVDLARTVAPPTGSSTQPIEIDCAGTADNNTALAGGGEEERTAGGPEGDAPVAATEGETLWGHAVHEHELSAGDQVYVYRGVIQHHGIVTHVPVPGRAGGVRVVHFDSNCDGVESTSLETFLNGGTLRRATYGASAWSTGLDYGASYGCATDDPALIVTRATEAAKFGEGASGWSGYNLCTNNCETFAYWCSTGRRQVLSRQAARGLVGAGVVAAGASAVVSAGGFASAGAAATVLVPRGVRGVQRGVKAIEWATGVAVVAVAAADVVSTLVTRAPVERNLNLRSGSTVA 325          
BLAST of mRNA_E-siliculosus-1a_M_contig804.16299.1 vs. uniprot
Match: K9SY43_9CYAN (Phage shock protein A (IM30), suppresses sigma54-dependent transcription n=3 Tax=Pleurocapsales TaxID=52604 RepID=K9SY43_9CYAN)

HSP 1 Score: 61.2 bits (147), Expect = 3.340e-7
Identity = 43/125 (34.40%), Postives = 57/125 (45.60%), Query Frame = 0
Query:  122 LSAGDQIYVYRGVIQHHGIVTHVPVPGRAGGVRVVHFDSNCDGVESTSLETFLNGGTLRRATYGASAWSTGLDYGASYGCAADDPALIVTRATEAAKFGEGASGWSGYNLCTNNCETFAYWCSTG 246
            +S GDQIYVYR +I   G+  H  +    G   V+H+    + +E TS+ETF  G  +    Y      TG  + A          ++V RA       +   G   YNL  NNCE FA WC TG
Sbjct:   11 MSRGDQIYVYRELINLQGVYEHHGID--CGDGSVIHYRKPSETIERTSIETFTRGNQIYVREY-----PTGFCFIAD---------VVVDRA-------QSRLGERKYNLLFNNCEHFATWCKTG 112          
BLAST of mRNA_E-siliculosus-1a_M_contig804.16299.1 vs. uniprot
Match: A0A022PQW5_ERYGU (LRAT domain-containing protein n=2 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022PQW5_ERYGU)

HSP 1 Score: 58.5 bits (140), Expect = 1.510e-6
Identity = 49/138 (35.51%), Postives = 64/138 (46.38%), Query Frame = 0
Query:  112 LWGHAVHEHELSAGDQIYVYRG--VIQHHGIVTHVPVPGRAGGVRVVHFDSNCDGVESTSLETFLNGGTLRRATYGASA-WSTGLDYGASYGCAADDPALIVTRATEAAKFGEGASGWSGYNLCTNNCETFAYWCSTG 246
            L+ + +  +EL+ GD IY +R   +  HH                V+H+ S    VES+SLETFLNGG L R  YG S+        G +      D A  V R  +     EG  G   YNL  NNCE F+ +C TG
Sbjct:    3 LFSNKIKRNELNPGDHIYTWRRLYIYAHH----------------VIHYTSTSM-VESSSLETFLNGGNLYRFEYGVSSKLFMAKVRGGTCTTNVSDAADEVIRRAKYLLENEGIFGV--YNLIDNNCENFSVYCKTG 121          
BLAST of mRNA_E-siliculosus-1a_M_contig804.16299.1 vs. uniprot
Match: B7KHG3_GLOC7 (NC domain protein n=1 Tax=Gloeothece citriformis (strain PCC 7424) TaxID=65393 RepID=B7KHG3_GLOC7)

HSP 1 Score: 57.8 bits (138), Expect = 4.390e-6
Identity = 41/125 (32.80%), Postives = 55/125 (44.00%), Query Frame = 0
Query:  122 LSAGDQIYVYRGVIQHHGIVTHVPVPGRAGGVRVVHFDSNCDGVESTSLETFLNGGTLRRATYGASAWSTGLDYGASYGCAADDPALIVTRATEAAKFGEGASGWSGYNLCTNNCETFAYWCSTG 246
            ++ GDQIYVYR ++   G+  H  +    G   V+H+    + +E TSL+ F  G       Y           G S+      P ++V RA       E   G   YNL  NNCE FA WC TG
Sbjct:    1 MATGDQIYVYRELLNLQGLYEHHGID--CGDGTVIHYRKPSEMIERTSLDIFTRGNPTYIKEY---------PQGFSF-----IPEIVVQRA-------ESRLGEQKYNLLFNNCEHFATWCKTG 102          
BLAST of mRNA_E-siliculosus-1a_M_contig804.16299.1 vs. uniprot
Match: A0A6P5TMJ6_PRUAV (HRAS-like suppressor 2 n=1 Tax=Prunus avium TaxID=42229 RepID=A0A6P5TMJ6_PRUAV)

HSP 1 Score: 56.6 bits (135), Expect = 6.760e-6
Identity = 56/184 (30.43%), Postives = 73/184 (39.67%), Query Frame = 0
Query:  111 TLWGHAVHEHELSAGDQIYVYRGVIQHHGIVTHVPVPGRAGGVRVVHFDSNCD---------------------------GVESTSLETFLNGGTLRRATYGASAWSTGLDYG---ASYGCAADDPALIVTRATEAAKFGE-GASGWSGYNLCTNNCETFAYWCSTGRRQVLSRQAARGLVGAG 263
            +L  + +   EL  GD IY YR    HHGI          G   V+HF   C                            GV  T ++ FL G  L R  Y  S     L      +++ C   D    V  ATE  K  E   +G+  Y+L +NNCETFA +C TG+R  LSRQ  + +   G
Sbjct:    2 SLLSNRIPREELQPGDHIYSYRIGFSHHGIYV--------GEGWVIHFTPTCKSVIRFSATYEPVTTSCRRCGHDPNKKGGVLKTCIDCFLKGDGLHRFEYNVSLSYVILKQDGTCSTWSCYPSDE--TVRLATEIFKKDEVDGTGFGEYDLLSNNCETFASYCKTGKR--LSRQVIQAIASVG 173          
BLAST of mRNA_E-siliculosus-1a_M_contig804.16299.1 vs. uniprot
Match: A0A6P2AF48_9CHRO (NC domain-containing protein n=1 Tax=Gloeocapsa sp. DLM2.Bin57 TaxID=2480214 RepID=A0A6P2AF48_9CHRO)

HSP 1 Score: 56.6 bits (135), Expect = 1.090e-5
Identity = 47/131 (35.88%), Postives = 58/131 (44.27%), Query Frame = 0
Query:  122 LSAGDQIYVYR------GVIQHHGIVTHVPVPGRAGGVRVVHFDSNCDGVESTSLETFLNGGTLRRATYGASAWSTGLDYGASYGCAADDPALIVTRATEAAKFGEGASGWSGYNLCTNNCETFAYWCSTG 246
            +  G+QIYVYR      GV QHHGI          G   V+H+    + +E TSL TF  G  +    Y        LD G  +      P ++V RA    + GE       YNL  NNCE FA WC TG
Sbjct:    1 MGLGEQIYVYRELLNLEGVYQHHGI--------DCGDGTVIHYRKPSEIIEQTSLVTFARGNQVYLREY--------LD-GFCF-----IPEIVVERAKS--RLGE-----QKYNLLFNNCEHFATWCKTG 102          
BLAST of mRNA_E-siliculosus-1a_M_contig804.16299.1 vs. uniprot
Match: E0UD99_GLOV7 (NC domain protein n=1 Tax=Gloeothece verrucosa (strain PCC 7822) TaxID=497965 RepID=E0UD99_GLOV7)

HSP 1 Score: 55.5 bits (132), Expect = 2.660e-5
Identity = 39/125 (31.20%), Postives = 55/125 (44.00%), Query Frame = 0
Query:  122 LSAGDQIYVYRGVIQHHGIVTHVPVPGRAGGVRVVHFDSNCDGVESTSLETFLNGGTLRRATYGASAWSTGLDYGASYGCAADDPALIVTRATEAAKFGEGASGWSGYNLCTNNCETFAYWCSTG 246
            ++ GDQIYVYR ++   G+  H  +    G   V+H+    + +E TSL+ F  G       Y     + G  +          P ++V RA       +   G   YNL  NNCE FA WC TG
Sbjct:    1 MARGDQIYVYRELLNLQGLYEHHGID--CGDDTVIHYRKPSETIERTSLDIFTRGNPTYIRQY-----AQGFCF---------IPDIVVQRA-------QSRLGEQKYNLLFNNCEHFATWCKTG 102          
BLAST of mRNA_E-siliculosus-1a_M_contig804.16299.1 vs. uniprot
Match: A0A2W7B710_9CYAN (NC domain-containing protein n=1 Tax=Snowella sp. TaxID=2164131 RepID=A0A2W7B710_9CYAN)

HSP 1 Score: 55.1 bits (131), Expect = 3.590e-5
Identity = 42/131 (32.06%), Postives = 55/131 (41.98%), Query Frame = 0
Query:  122 LSAGDQIYVYR------GVIQHHGIVTHVPVPGRAGGVRVVHFDSNCDGVESTSLETFLNGGTLRRATYGASAWSTGLDYGASYGCAADDPALIVTRATEAAKFGEGASGWSGYNLCTNNCETFAYWCSTG 246
            ++ GDQIYVYR      GV +HHGI          G   V+H+    + +E TS E F  G  + R  +                C   D  +++ RA       E   G   Y+L  NNCE FA WC TG
Sbjct:    1 MAQGDQIYVYRELLNLEGVYEHHGI--------DCGDGTVIHYRKPSETIERTSWEVFKRGNPIYRKKH------------EQQFCFLPD--IVIRRA-------ESRLGEQKYHLLFNNCEHFANWCKTG 102          
BLAST of mRNA_E-siliculosus-1a_M_contig804.16299.1 vs. uniprot
Match: A0A8J6SCD5_9CYAN (Lecithin retinol acyltransferase family protein n=1 Tax=Trichocoleus sp. FACHB-69 TaxID=2692874 RepID=A0A8J6SCD5_9CYAN)

HSP 1 Score: 52.8 bits (125), Expect = 5.600e-5
Identity = 42/155 (27.10%), Postives = 63/155 (40.65%), Query Frame = 0
Query:  122 LSAGDQIYVYRGVIQHHGIVTHVPVPGRAGGVRVVHFDSNC--DGVESTSLETFLNGGTLRRATYGASAWSTGLDYGASYGCAADDPALIVTRATEAAKFGEGASGWSGYNLCTNNCETFAYWCSTGRRQVLSRQAARGLVGAGVVAAGASAVVS 274
            +S GD IYV  GV  HHGI          G   V+H+        ++ T +  F+ G T+    YG                  D P +++ RA    K  +       Y+L  NNCE FA WC TG+++      A+   G    + G + ++S
Sbjct:    1 MSQGDHIYVNCGVYDHHGI--------DCGDGTVIHYTGEKLKGTIDCTPIAEFITGKTVFVREYGK----------------CDPPDIVIQRAKSKLKEEK-------YDLFDNNCEHFATWCKTGKKESEQVHRAKAAAGGAAGSTGTATIIS 124          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig804.16299.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5JNU1_9PHAE3.100e-21993.88LRAT domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LNF0_ECTSI1.820e-21596.31LRAT domain-containing protein n=1 Tax=Ectocarpus ... [more]
K9SY43_9CYAN3.340e-734.40Phage shock protein A (IM30), suppresses sigma54-d... [more]
A0A022PQW5_ERYGU1.510e-635.51LRAT domain-containing protein n=2 Tax=Erythranthe... [more]
B7KHG3_GLOC74.390e-632.80NC domain protein n=1 Tax=Gloeothece citriformis (... [more]
A0A6P5TMJ6_PRUAV6.760e-630.43HRAS-like suppressor 2 n=1 Tax=Prunus avium TaxID=... [more]
A0A6P2AF48_9CHRO1.090e-535.88NC domain-containing protein n=1 Tax=Gloeocapsa sp... [more]
E0UD99_GLOV72.660e-531.20NC domain protein n=1 Tax=Gloeothece verrucosa (st... [more]
A0A2W7B710_9CYAN3.590e-532.06NC domain-containing protein n=1 Tax=Snowella sp. ... [more]
A0A8J6SCD5_9CYAN5.600e-527.10Lecithin retinol acyltransferase family protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007053LRAT domainPFAMPF04970LRATcoord: 121..247
e-value: 1.8E-12
score: 47.7
NoneNo IPR availablePANTHERPTHR46137FAMILY NOT NAMEDcoord: 161..323

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig804contigE-siliculosus-1a_M_contig804:2768..7457 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig804.16299.1mRNA_E-siliculosus-1a_M_contig804.16299.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig804 2768..7457 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig804.16299.1 ID=prot_E-siliculosus-1a_M_contig804.16299.1|Name=mRNA_E-siliculosus-1a_M_contig804.16299.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=344bp
MGGEKESAAAAVQHTELMAEMEETFTDGTKGNDSTLGDNDPEVELQRWQQ
WRNVDLARTAAPPTGSSAQPIEVDCAGTADNNTALAGGGEEERAAGGPEG
DAPVAAEEGETLWGHAVHEHELSAGDQIYVYRGVIQHHGIVTHVPVPGRA
GGVRVVHFDSNCDGVESTSLETFLNGGTLRRATYGASAWSTGLDYGASYG
CAADDPALIVTRATEAAKFGEGASGWSGYNLCTNNCETFAYWCSTGRRQV
LSRQAARGLVGAGVVAAGASAVVSAGGFASAGAAATVLVPRGVRGVQRGV
KAIEWATGVAVVAVAAADVVSTLVTRAPVERNLNLRSGSTVAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007053LRAT_dom