prot_E-siliculosus-1a_M_contig80.16275.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig80.16275.1
Unique Nameprot_E-siliculosus-1a_M_contig80.16275.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length82
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig80.16275.1 vs. uniprot
Match: D7G3G1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3G1_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 6.880e-24
Identity = 43/56 (76.79%), Postives = 45/56 (80.36%), Query Frame = 0 
Query:   20 EQVPGRLHCRIEPGLRWTSKALVCVYAGAPTWVAGILWGMQKCPDFARACSSTNAS 75
            +QVPGRLH R+EP LRW  KALVC YAGA T VAG LWGMQKCP  ARAC STNAS
Sbjct:    8 KQVPGRLHRRLEPSLRWRKKALVCFYAGATTCVAGGLWGMQKCPGLARACPSTNAS 63
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig80.16275.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3G1_ECTSI6.880e-2476.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig80contigE-siliculosus-1a_M_contig80:559651..570560 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig80.16275.1mRNA_E-siliculosus-1a_M_contig80.16275.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig80 559651..570560 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig80.16275.1 ID=prot_E-siliculosus-1a_M_contig80.16275.1|Name=mRNA_E-siliculosus-1a_M_contig80.16275.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=82bp
MHCLLVNTGCHETEGERDWEQVPGRLHCRIEPGLRWTSKALVCVYAGAPT
WVAGILWGMQKCPDFARACSSTNASSLVDSS*
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