prot_E-siliculosus-1a_M_contig80.16274.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig80.16274.1
Unique Nameprot_E-siliculosus-1a_M_contig80.16274.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length322
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig80.16274.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 2.450e-8
Identity = 30/39 (76.92%), Postives = 32/39 (82.05%), Query Frame = 0 
Query:    2 VWPERLKRLVFASDMPVNTASWPTFLQQLSFGAKFNQPI 40
            VWP+RLKR+VF SDM VNTASWP  LQQLSFG  FNQ I
Sbjct:  134 VWPQRLKRMVFESDMTVNTASWPASLQQLSFGCGFNQAI 172
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BLAST of mRNA_E-siliculosus-1a_M_contig80.16274.1 vs. uniprot
Match: A0A6H5K2L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2L2_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 3.100e-5
Identity = 26/38 (68.42%), Postives = 29/38 (76.32%), Query Frame = 0 
Query:    1 MVWPERLKRLVFASDMPVNTASWPTFLQQLSFGAKFNQ 38
            M+W +RLKRLV   D PV TASWP  LQQLSFG KFN+
Sbjct:  124 MLWLQRLKRLVLELDTPVITASWPASLQQLSFGYKFNK 161
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BLAST of mRNA_E-siliculosus-1a_M_contig80.16274.1 vs. uniprot
Match: A0A6H5KJ08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ08_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 8.810e-5
Identity = 23/39 (58.97%), Postives = 30/39 (76.92%), Query Frame = 0 
Query:    2 VWPERLKRLVFASDMPVNTASWPTFLQQLSFGAKFNQPI 40
            +WP R+KR++F +D+PVNT SWP  L+QLSF   FNQ I
Sbjct:   34 IWPLRIKRVLFDTDVPVNTVSWPASLRQLSFVGAFNQVI 72
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig80.16274.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KNI6_9PHAE2.450e-876.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2L2_9PHAE3.100e-568.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJ08_9PHAE8.810e-558.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 146..189
e-value: 4.1E-6
score: 26.9
coord: 256..297
e-value: 1.3E-7
score: 31.6
coord: 102..143
e-value: 1.0E-6
score: 28.8
coord: 58..99
e-value: 7.5E-6
score: 26.0
coord: 212..255
e-value: 1.4E-8
score: 34.8
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 198..303
coord: 90..195
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 156..258
coord: 59..149
NoneNo IPR availablePANTHERPTHR32134:SF134FNIP REPEAT-CONTAINING PROTEIN DDB_G0274063/DDB_G0272642coord: 7..61
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 7..61
NoneNo IPR availablePANTHERPTHR32134:SF134FNIP REPEAT-CONTAINING PROTEIN DDB_G0274063/DDB_G0272642coord: 156..258
coord: 59..149
NoneNo IPR availablePANTHERPTHR32134:SF134FNIP REPEAT-CONTAINING PROTEIN DDB_G0274063/DDB_G0272642coord: 198..303
coord: 90..195
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 30..315

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig80contigE-siliculosus-1a_M_contig80:535253..536218 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig80.16274.1mRNA_E-siliculosus-1a_M_contig80.16274.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig80 535253..544815 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig80.16274.1 ID=prot_E-siliculosus-1a_M_contig80.16274.1|Name=mRNA_E-siliculosus-1a_M_contig80.16274.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=322bp
MVWPERLKRLVFASDMPVNTASWPTFLQQLSFGAKFNQPIAEVMWPTSLQ
RLSFGFEFNQPIVGVAWPASLQHLSFGARFNQLIVGAAWPASLQRLSFGT
VFNQPIVGVLWPASLQQLAFGDTFNQPIVGVVWPASLQQLSFGMEFNQPI
IGVVWSASLQRLSFRYKFNQPITGVVWPTSLQRLSFGSFFNQRIVGVVWP
ASRRQLAFGDKFNQPIVGVSWPASLEQLSFGDEFNQSITEAVWPASLQRL
SFRYKFNQPITGVMWSTSLQRLSFGDKFNQPIDGIVWPASLEQISFGHNF
IQPIIESCGRPPWSNYCLAMNS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP