prot_E-siliculosus-1a_M_contig80.16261.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig80.16261.1
Unique Name	prot_E-siliculosus-1a_M_contig80.16261.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	364

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig80.16261.1 vs. uniprot
Match: D7FP77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP77_ECTSI)

HSP 1 Score: 520 bits (1339), Expect = 4.660e-182
Identity = 318/347 (91.64%), Postives = 320/347 (92.22%), Query Frame = 0

Query:    1 MAGPAEASSRASPTSSFNSSQEFSASRVLSNGTCGVVSSVIWIIISAGLCFPWLLEQPSASKAGDSPKSVAWFVVLAIDLSIGAMSIFSLWFRRSTLSIMLLIWGAGGIVATFLMGSFAMLPAVATICCCAEELCVLGAADISPLDDSFCHTTLEFCMETKWSLWCYYGGILLAMTSIVLLVNSVALHHKTLLDCERRRNEAAKAIRAANRXXXXXXXXXXXXXXXXASYAGSLSGXXXXXXXXXXXXXXXXXXXXXXXLLNPAETSSSRGRGGAPAVAPSFESPTRGYPRKPVATAEVGGGRVTPPVEFAALDPTGDTDIEMSRLGSPTSAAMSQSGQDEGDGNFG 347
            MAGPAEASSRASPTSSFNSSQEFSASRVLSNGTCGVVSSVIWIIISAGLCFPWLLEQPSASKAGDSPKSVAWFVVLAIDL IGAMS+FSLWFRRSTLSIMLLIWGAGGIV TFLMGSFAMLPAVATICCCAEELCVLGAADISPLDDSFCHTTLE CMETKWSLWCYYGGILLAMTSIVLLVNSVALHHKTLLDCER              XXXXXXXXXXXXXXXX         XXXXXXXXXXXXXXXXXXXXXXXLLNPAETSSSRGRGGAPA+APSFESPTRGYPRKPVATAEVGGGRVTPPVEFAALDPTG TDIEMSRLGSPTSAAMSQSGQDEGDGNFG
Sbjct:    1 MAGPAEASSRASPTSSFNSSQEFSASRVLSNGTCGVVSSVIWIIISAGLCFPWLLEQPSASKAGDSPKSVAWFVVLAIDLLIGAMSVFSLWFRRSTLSIMLLIWGAGGIVVTFLMGSFAMLPAVATICCCAEELCVLGAADISPLDDSFCHTTLELCMETKWSLWCYYGGILLAMTSIVLLVNSVALHHKTLLDCERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNPAETSSSRGRGGAPAIAPSFESPTRGYPRKPVATAEVGGGRVTPPVEFAALDPTGGTDIEMSRLGSPTSAAMSQSGQDEGDGNFG 347

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BLAST of mRNA_E-siliculosus-1a_M_contig80.16261.1 vs. uniprot
Match: A0A6H5JN85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN85_9PHAE)

HSP 1 Score: 472 bits (1215), Expect = 1.520e-161
Identity = 317/462 (68.61%), Postives = 322/462 (69.70%), Query Frame = 0

Query:    1 MAGPAEASSRASPTSSFNSSQEFSASRVLSNGTCGVVSSVIWIIISAGLCFPWLLEQPSASKAGDSPKSVAWFVVLAIDLSIGAMSIFSLWFRRSTLSIMLLIWGAGGIVATFLMGSFAMLPAVATI----------------------CCCAEELCVLGAADISPLDDSFCHTTLEFCMETKWSLWCYYGGILLAMTSIVLLVNSVALHHK---------------------------------------------------------------------------------------------TLLDCERRRNEAAKAIRAANRXXXXXXXXXXXXXXXXASYAGSLSGXXXXXXXXXXXXXXXXXXXXXXXLLNPAETSSSRGRGGAPAVAPSFESPTRGYPRKPVATAEVGGGRVTPPVEFAALDPTGDTDIEMSRLGSPTSAAMSQSGQDEGDGNFG 347
            MAGPAEASSRAS TSSFNSSQEFSASRVLSNG CGVVSSVIWIIISAGLCFPWLLEQP ASKAGDSPKSVAWFVVLAIDLSIGAMS+FSLWFRRSTLSIMLLIWGAGGIVATFL+GSFAMLPAVAT+                      CCCAEELCVLGAADISPLDDSFC+TTLE CMETKWSLWCYYGGILLAMTSIVLLVNSVALHHK                                                                                             TLLDCERR NEAAKAIRAANR   XXXXXXXXXXXXX         XXXXXXXXXXXXXXXXXXXXX  LLNPAET+SSRGRGGAPAVAPSFESP RGYPRKPVATAEV G RVTPPVEFAAL P  DTDIEMSRLGSPTSAAMSQSGQDEGDGNFG
Sbjct:    1 MAGPAEASSRASSTSSFNSSQEFSASRVLSNGACGVVSSVIWIIISAGLCFPWLLEQPPASKAGDSPKSVAWFVVLAIDLSIGAMSVFSLWFRRSTLSIMLLIWGAGGIVATFLVGSFAMLPAVATMSTSSFTMSTSCATANPVDLGGRCCCAEELCVLGAADISPLDDSFCYTTLELCMETKWSLWCYYGGILLAMTSIVLLVNSVALHHKVLGRKEIVHLVQTQHDLLSKTQKNVPQQIIMRSSLTDVVGSGVVENLVGMEEVEEVDVADTVKTKQGRVRSEPHKARTHRTQDTLQSNRPIEETLLDCERRWNEAAKAIRAANRSRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLLLNPAETASSRGRGGAPAVAPSFESPARGYPRKPVATAEVCGDRVTPPVEFAALYPARDTDIEMSRLGSPTSAAMSQSGQDEGDGNFG 462

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig80.16261.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig80.16261.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FP77_ECTSI	4.660e-182	91.64	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JN85_9PHAE	1.520e-161	68.61	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 119..161
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 70..92
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 93..98
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 34..55
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 56..69
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..33
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 99..118
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 183..364
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 162..182
None	No IPR available	TMHMM	TMhelix		coord: 70..92
None	No IPR available	TMHMM	TMhelix		coord: 99..121
None	No IPR available	TMHMM	TMhelix		coord: 165..187
None	No IPR available	TMHMM	TMhelix		coord: 33..55

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig80	contig	E-siliculosus-1a_M_contig80:413851..417531 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig80.16261.1	mRNA_E-siliculosus-1a_M_contig80.16261.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig80 413851..417531 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig80.16261.1 ID=prot_E-siliculosus-1a_M_contig80.16261.1|Name=mRNA_E-siliculosus-1a_M_contig80.16261.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=364bp
MAGPAEASSRASPTSSFNSSQEFSASRVLSNGTCGVVSSVIWIIISAGLC
FPWLLEQPSASKAGDSPKSVAWFVVLAIDLSIGAMSIFSLWFRRSTLSIM
LLIWGAGGIVATFLMGSFAMLPAVATICCCAEELCVLGAADISPLDDSFC
HTTLEFCMETKWSLWCYYGGILLAMTSIVLLVNSVALHHKTLLDCERRRN
EAAKAIRAANRSRRRRQQLWEQEVYGGASYAGSLSGARPPSTRRTGGADD
NSHAGGSTLLLNPAETSSSRGRGGAPAVAPSFESPTRGYPRKPVATAEVG
GGRVTPPVEFAALDPTGDTDIEMSRLGSPTSAAMSQSGQDEGDGNFGGGG
GGGGGGGGGGFTIG