prot_E-siliculosus-1a_M_contig80.16258.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig80.16258.1
Unique Nameprot_E-siliculosus-1a_M_contig80.16258.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length517
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig80.16258.1 vs. uniprot
Match: D7FP74_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP74_ECTSI)

HSP 1 Score: 326 bits (835), Expect = 1.730e-102
Identity = 491/504 (97.42%), Postives = 495/504 (98.21%), Query Frame = 0 
Query:   13 MVGRDQQHAFLRGFEPELVKLVFDTATAEQLEAWLRLSLELAADNKHLELISRLENAGAVGSRFHLAVRQGNGMLVADTIKRGESPDARDGNGDAPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWVSPFLDSESCSXXXXXXXXXXXXXXXXXXKHGADMDGAASTGLTLLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANHRNPRIENDVVNLRFGREPTPLELAACHGHAHVVRTMLRHGADVDSKDCPYQPALHRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHNCDGEELQAENIEQLESLLICAGLDGVNND 516
            M+GRDQQHAFLRGFEPELVKL+FDTATAEQLEAWLRLSLELAADNKHLELISRLENAGAVGSRFHLAVRQGNGMLVADTIKRGESPDARDGNGDAPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWVSPFLDSESCSXXXXXXXXXXXXXXXXX KHGADMD AASTGLTLLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANHRNP IENDVVNLRFG EP+PLELAACHGHAHVVRTMLRHGADVDS DCPYQPALHRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  GHNCDGEELQAENIEQLESLLICAGL  +NND
Sbjct:    1 MIGRDQQHAFLRGFEPELVKLMFDTATAEQLEAWLRLSLELAADNKHLELISRLENAGAVGSRFHLAVRQGNGMLVADTIKRGESPDARDGNGDAPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWVSPFLDSESCSXXXXXXXXXXXXXXXXXAKHGADMDAAASTGLTLLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANHRNPIIENDVVNLRFGGEPSPLELAACHGHAHVVRTMLRHGADVDSTDCPYQPALHRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIGHNCDGEELQAENIEQLESLLICAGLGDINND 504
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig80.16258.1 vs. uniprot
Match: A0A6H5JKG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG9_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 1.190e-46
Identity = 84/89 (94.38%), Postives = 86/89 (96.63%), Query Frame = 0 
Query:   13 MVGRDQQHAFLRGFEPELVKLVFDTATAEQLEAWLRLSLELAADNKHLELISRLENAGAVGSRFHLAVRQGNGMLVADTIKRGESPDAR 101
            MVGRD QHA LRGFEPELV+LVFDTATAEQLEAWLRLSLELAADNKHLELISRLENAGAVGSRFHLAVRQGNGMLV DTIKRGESP+AR
Sbjct:    1 MVGRDHQHACLRGFEPELVRLVFDTATAEQLEAWLRLSLELAADNKHLELISRLENAGAVGSRFHLAVRQGNGMLVTDTIKRGESPNAR 89
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig80.16258.1 vs. uniprot
Match: D7G751_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G751_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 6.470e-6
Identity = 33/84 (39.29%), Postives = 46/84 (54.76%), Query Frame = 0 
Query:   23 LRGFEPELVKLVFDTATAEQLEAWLRLSLELAADNKHLELISRLENAGAVGSRFHLAVRQGNGMLVADTIKRGESPDARDGNGD 106
            LRG E  +  LV       Q   WLR  LE AA   +++L+++L+ AGA GS  HLA+R G   L  + ++ G    A+D NGD
Sbjct:   26 LRGTEKTIFDLVCAGTNRRQWAEWLRTPLEHAAGVGNIDLVTKLQGAGAGGSALHLALRAGQDALAQELLRLGAPTKAKDNNGD 109
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig80.16258.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FP74_ECTSI1.730e-10297.42Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus Ta... [more]
A0A6H5JKG9_9PHAE1.190e-4694.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G751_ECTSI6.470e-639.29Ankyrin repeat protein n=2 Tax=Ectocarpus siliculo... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 327..341
score: 34.3
coord: 138..153
score: 42.72
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 270..300
e-value: 23.0
score: 13.9
coord: 171..200
e-value: 0.022
score: 23.9
coord: 311..340
e-value: 2.4E-4
score: 30.5
coord: 237..266
e-value: 0.0081
score: 25.4
coord: 344..373
e-value: 0.0011
score: 28.3
coord: 104..133
e-value: 9.5E-4
score: 28.5
coord: 204..233
e-value: 0.074
score: 22.2
coord: 443..472
e-value: 6.4E-5
score: 32.3
coord: 137..166
e-value: 0.025
score: 23.8
coord: 377..406
e-value: 0.31
score: 20.1
coord: 410..439
e-value: 0.031
score: 23.4
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 237..262
score: 10.713
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 104..136
score: 14.452
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 348..376
score: 12.182
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 410..442
score: 11.674
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 171..203
score: 10.793
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 204..236
score: 11.381
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 137..162
score: 10.018
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 311..343
score: 12.022
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 443..475
score: 13.197
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 377..409
score: 10.312
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 38..302
e-value: 1.1E-59
score: 204.1
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 303..417
e-value: 1.8E-31
score: 111.5
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 418..500
e-value: 3.2E-18
score: 68.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 305..481
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 54..290
NoneNo IPR availablePFAMPF13637Ank_4coord: 206..258
e-value: 1.6E-6
score: 28.5
coord: 347..397
e-value: 9.0E-10
score: 38.9
NoneNo IPR availablePANTHERPTHR24178FAMILY NOT NAMEDcoord: 314..477
coord: 46..403
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 109..199
e-value: 1.1E-13
score: 51.6
coord: 265..342
e-value: 5.1E-8
score: 33.4
coord: 412..472
e-value: 2.6E-10
score: 40.7
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 76..480
score: 111.237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig80contigE-siliculosus-1a_M_contig80:393101..397337 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig80.16258.1mRNA_E-siliculosus-1a_M_contig80.16258.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig80 392743..398624 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig80.16258.1 ID=prot_E-siliculosus-1a_M_contig80.16258.1|Name=mRNA_E-siliculosus-1a_M_contig80.16258.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=517bp
MRTPSTHRGRTRMVGRDQQHAFLRGFEPELVKLVFDTATAEQLEAWLRLS
LELAADNKHLELISRLENAGAVGSRFHLAVRQGNGMLVADTIKRGESPDA
RDGNGDAPLHIAGARGDVGLVRLLLSSGADPNLPDRKQRTPLHVAARYGH
AETAGALLSGGAWVSPFLDSESCSPLELAVRHGHVDVVGVLAKHGADMDG
AASTGLTLLHLAASEDMVDLLQCLVAAGASLESRDTDGSTALHIAAEKGA
AAAVKVLLALGARPCEFNGDGLSPLGLACKGGHLQAVLAILAANHRNPRI
ENDVVNLRFGREPTPLELAACHGHAHVVRTMLRHGADVDSKDCPYQPALH
RAADGGHVDVLKVLIDHGADLDAVDADAETALHHAATFDQSGAVDVLVRA
GANIEAVGEELYTPLHLACRFRKREATRALLAHGADVQTADEDGCTPLHS
AASNADAQVVELLLRFGADAAITSAAGSTAAEVIGHNCDGEELQAENIEQ
LESLLICAGLDGVNND*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt