prot_E-siliculosus-1a_M_contig8.16216.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16216.1
Unique Nameprot_E-siliculosus-1a_M_contig8.16216.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length373
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16216.1 vs. uniprot
Match: A0A6H5L1H9_9PHAE (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1H9_9PHAE)

HSP 1 Score: 531 bits (1369), Expect = 1.710e-187
Identity = 315/374 (84.22%), Postives = 322/374 (86.10%), Query Frame = 0
Query:    1 MEGLPLDVILLVSIGVVAVTWLVVYVRRKLASNDQXXXXXXXXXXXXXXXXXXGVDGANNDTTPGRLARHPGGECPICLSIEVETPVQTNCGHWFCARCILSYYDQGGRVRIRCPMCRQEVTMLYGAAGDAQAAGDTDQAHDARAGSAPATTTGSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVLLSWERSRTARXXXXXXXXXXXXXXXXXXXXXXXXXXP--PAAVASGEGRFDNSPQGAGMAAVLALTVGALLXXXXXXXXXXXXXXXXXXXXXXXAAERYGSRAPRAMPPLAGDW 372
            MEGLPLDVILLVSIG+VAVT LVVY+ RKL SND+                  G+DG+NNDTTPGRLARHPGGECPICLSIEVETPVQTNCGHWFCARCILSYYDQGGRVRIRCPMCRQEVTML+GAAGDAQAAGDTDQAHDARA SAPA TTGSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVLLSWERSR ARXXXXXXXXXXXXXXXXXXXXXXXXXX   PAAVASGEGRFDNSPQGAG+AAVLAL VGALL                       AAERYGSRAPR MPPLAGDW
Sbjct:    1 MEGLPLDVILLVSIGIVAVTSLVVYISRKLTSNDEDEEGAAT-----------GIDGSNNDTTPGRLARHPGGECPICLSIEVETPVQTNCGHWFCARCILSYYDQGGRVRIRCPMCRQEVTMLHGAAGDAQAAGDTDQAHDARAESAPAATTGSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVLLSWERSRAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAVASGEGRFDNSPQGAGIAAVLALLVGALLALAGGGEGQTALGAGAMGAAVAAAAERYGSRAPRVMPPLAGDW 363          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16216.1 vs. uniprot
Match: D7FX72_ECTSI (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX72_ECTSI)

HSP 1 Score: 369 bits (947), Expect = 5.650e-125
Identity = 231/258 (89.53%), Postives = 232/258 (89.92%), Query Frame = 0
Query:  116 MCRQEVTMLYGAAGDAQAAGDTDQAHDARAGSAPATTTGSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVLLSWERSRTARXXXXXXXXXXXXXXXXXXXXXXXXXX-PPAAVASGEGRFDNSPQGAGMAAVLALTVGALLXXXXXXXXXXXXXXXXXXXXXXXAAERYGSRAPRAMPPLAGDW 372
            MCRQEVTMLYGAAGDAQAAGDTD+AHDARAGSAPATTTGSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVLLSWERSR ARXXXXXXXXXXXXXXXXXXXXXXXXXX PPAAVASGEGRFDNSPQGAGMAAVLAL VGALL                       AAERYGSRAPRAMPPLAGDW
Sbjct:    1 MCRQEVTMLYGAAGDAQAAGDTDEAHDARAGSAPATTTGSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVLLSWERSRAARXXXXXXXXXXXXXXXXXXXXXXXXXXXPPAAVASGEGRFDNSPQGAGMAAVLALMVGALLALAGGGEGQTAMAAGAMGAAVAAAAERYGSRAPRAMPPLAGDW 258          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16216.1 vs. uniprot
Match: A0A2Z7CY40_9LAMI (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7CY40_9LAMI)

HSP 1 Score: 128 bits (322), Expect = 4.650e-32
Identity = 73/189 (38.62%), Postives = 107/189 (56.61%), Query Frame = 0
Query:   75 CPICLSIEVETPVQTNCGHWFCARCILSYYDQGGRVR-IRCPMCRQEVTMLYGAAGDAQAAGDTDQAHDARAGSAPATTTGSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVLLS 262
            C IC S     P Q NC HWFC  CIL  ++ G  +   +CP+CR+E+T+L  +   ++      Q+H             + EI   I R+N +   R     Q ++D P LLRRL  D+ R   R    ++R  V L + V+A+Y+LSP+D+IPE L+G+ GLLDDL++V+  +LH+ S+YR VLLS
Sbjct:   10 CSICHS-NFNIPCQANCSHWFCGGCILQVWEHGAALHPCKCPLCRREITLLVPSEASSR------QSH----------MVNTAEILRSIERYNRQYGERSNGVMQRVQDLPFLLRRLLRDI-RDPQRTLPVVIRARVYLAMVVSAIYVLSPVDIIPEGLLGVIGLLDDLIIVLICVLHVASLYRAVLLS 180          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16216.1 vs. uniprot
Match: UPI0020095D38 (E3 ubiquitin-protein ligase RNF170-like n=3 Tax=Salvia TaxID=21880 RepID=UPI0020095D38)

HSP 1 Score: 126 bits (317), Expect = 2.230e-31
Identity = 75/190 (39.47%), Postives = 106/190 (55.79%), Query Frame = 0
Query:   74 ECPICLSIEVETPVQTNCGHWFCARCILSYYDQGGRVR-IRCPMCRQEVTMLYGAAGDAQAAGDTDQAHDARAGSAPATTTGSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVLLS 262
            EC IC     + P Q NCGHWFC RCIL  +D G  +R  +CP+CR+E+T+L              +AH          T    EI + I  +N +      S  Q + D P LLRRL  D+     R    ++R  V L + ++A+Y+LSP+D+IPE+L+GI GLLDDL+VV    L++ ++YRTVL+S
Sbjct:    9 ECSICQQ-NFQIPCQANCGHWFCGRCILQVWDFGHALRPCKCPLCRREITLLV-----------PSEAH---------RTADGAEILQRIEHYNRQFGAHPNSLMQRMYDLPFLLRRLTRDIM-DPQRALPLVVRARVYLAMILSAMYVLSPVDIIPEALLGIIGLLDDLIVVFMCFLYVAALYRTVLVS 176          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16216.1 vs. uniprot
Match: A0A023GH49_AMBTT (E3 ubiquitin-protein ligase RNF170 n=3 Tax=Amblyomma TaxID=6942 RepID=A0A023GH49_AMBTT)

HSP 1 Score: 121 bits (304), Expect = 1.670e-28
Identity = 78/207 (37.68%), Postives = 116/207 (56.04%), Query Frame = 0
Query:   69 RHP----GGECPICLSIEVETPVQTNCGHWFCARCILSYYDQGG-RVRIRCPMCRQEVTMLYGAAGDAQAAGDTDQAHDARAGSAPATTTGSPEIQEEISRFNDRNSGRWRSPW-QVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVLLS-WERSRT 268
            RHP      +CPICL+ E   PV+TNCGH FCA C++SY+  G  R  +RCP+CRQ+V+++     D  +A DTD   + R             +  +I+ +N R SG  R PW   + D P LLR   S+       ++  + R  + L    A +Y++SP+D+IPE++ GI GLLDDL VV+ L +++T +YR  L + W+   T
Sbjct:   79 RHPHYGSDAQCPICLA-EPRYPVETNCGHLFCANCLVSYWHHGNWRGAVRCPVCRQQVSVMLRCFQDQHSAEDTDAQREERT-----------RLLRDINDYNRRYSGEPR-PWLDHLRDLPTLLRHAGSEFFSVGGIMY--MFRLRIVLCFVAAIMYLVSPLDMIPEAIFGILGLLDDLFVVLLLAIYVTVIYRRFLAARWQEDTT 270          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16216.1 vs. uniprot
Match: UPI001FB083FF (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB083FF)

HSP 1 Score: 117 bits (293), Expect = 7.710e-28
Identity = 68/187 (36.36%), Postives = 101/187 (54.01%), Query Frame = 0
Query:   75 CPICLSIEVETPVQTNCGHWFCARCILSYYDQGGRVR-IRCPMCRQEVTMLYGAAGDAQAAGDTDQAHDARAGSAPATTTGSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVL 260
            C IC +    TP Q NC HWFC RCIL  +D G   +  +CP+CR+E+T+L                  +RA S    ++   E+   I R+N     +  S  Q ++D P LLRRL  DL     R    ++R  V L + V+ +YI+SP+D+IPE ++GI GLLDD ++ +   LH+ ++YR+ L
Sbjct:   10 CSICHN-NFTTPCQANCSHWFCGRCILQVWDHGSSFQPCKCPLCRREITLLI----------------PSRASSNECNSSEVAEVFGRIERYNRHFGQQTNSLVQRMQDLPFLLRRLTRDLMNPQ-RSLPFVLRMRVYLAMLVSVIYIISPVDIIPEGILGIIGLLDDAIIALICFLHVAALYRSAL 178          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16216.1 vs. uniprot
Match: A0A6M2CSY6_RHIMP (E3 ubiquitin-protein ligase RNF170 (Fragment) n=2 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6M2CSY6_RHIMP)

HSP 1 Score: 118 bits (295), Expect = 1.310e-27
Identity = 77/209 (36.84%), Postives = 116/209 (55.50%), Query Frame = 0
Query:   65 GRLARHPGGE--CPICLSIEVETPVQTNCGHWFCARCILSYYDQGG-RVRIRCPMCRQEVTMLYGAAGDAQAAGDTDQAHDARAGSAPATTTGSPEIQEEISRFNDRNSGRWRSPW-QVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVLLS-WERSRT 268
            G +A H G +  CPICL  E    V+TNCGH FCA C++SY+  G  R  +RCP+CRQ+V+++     D     +TD   + RA            +  +I+ +N R SG  R PW   + D P LLR + S+       ++  + R  + L    A +Y++SP+D+IPE++ GI GLLDDL VV+ L +++T +YR  L + W+   T
Sbjct:   38 GSMAAHYGSDAQCPICLG-EPRHSVETNCGHLFCASCLVSYWHHGNWRGAVRCPVCRQQVSVMLRCFQDQHLPDETDAQREERA-----------RLLRDINDYNRRYSGEPR-PWLDHLRDLPTLLRHVGSEFFSMGGIMY--MFRLRIVLCFVAAIMYLISPLDMIPEAIFGILGLLDDLFVVLLLAIYVTVIYRRFLATRWQEDTT 231          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16216.1 vs. uniprot
Match: A0A7J7KM54_BUGNE (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7KM54_BUGNE)

HSP 1 Score: 119 bits (297), Expect = 1.350e-27
Identity = 68/187 (36.36%), Postives = 106/187 (56.68%), Query Frame = 0
Query:   74 ECPICLSIEVETPVQTNCGHWFCARCILSYYDQGGRVR-IRCPMCRQEVTMLYGAAGDAQAAGDTDQAHDARAGSAPATTTGSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTV 259
            +CP+CL   V+  ++TNCGH FC  CI++Y+  G  +  I CP CRQ VT+L  +    +   D++  +                + +E+  +N R SG  R+ W+ I+D P + R    DL   +  VF  + R  + + L +A LY+LSP+D+IPE  VGI GLLDDLV++  L L+++ +YR+V
Sbjct:   78 QCPVCLD-SVQYGLETNCGHLFCGSCIITYWQTGRWLGPIACPNCRQTVTILLNSFTAEELQEDSEAKN---------------RVLQEVRNYNRRFSGEPRTIWEYIQDLPTIFRHAIGDLFSEEGMVF--VFRARIYICLTIAVLYLLSPLDIIPEMAVGILGLLDDLVILFLLALYISMIYRSV 246          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16216.1 vs. uniprot
Match: A0A224Z849_9ACAR (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Rhipicephalus zambeziensis TaxID=60191 RepID=A0A224Z849_9ACAR)

HSP 1 Score: 119 bits (297), Expect = 2.450e-27
Identity = 77/209 (36.84%), Postives = 115/209 (55.02%), Query Frame = 0
Query:   65 GRLARHPGGE--CPICLSIEVETPVQTNCGHWFCARCILSYYDQGG-RVRIRCPMCRQEVTMLYGAAGDAQAAGDTDQAHDARAGSAPATTTGSPEIQEEISRFNDRNSGRWRSPW-QVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVLLS-WERSRT 268
            G +A H G +  CPICL  E   PV+TNCGH FCA C++SY+  G  R  +RCP+CRQ+V+++     D     +TD   + R             +  +I+ +N R SG  R PW   + D P LLR   S+       ++  + R  + L    A +Y++SP+D+IPE++ GI GLLDDL VV+ L +++T +YR  L + W+   T
Sbjct:   94 GSMAAHYGSDAQCPICLG-EPRHPVETNCGHLFCASCLVSYWHHGNWRGAVRCPVCRQQVSVMLRCFQDQHLPDETDAQREERT-----------RLLRDINDYNRRYSGEPR-PWLDHLRDLPTLLRHAGSEFFSVGGIMY--MFRLRIVLCFVAAIMYLISPLDMIPEAIFGILGLLDDLFVVLLLAIYVTVIYRRFLAARWQEDTT 287          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16216.1 vs. uniprot
Match: UPI000C1D1BA9 (E3 ubiquitin-protein ligase RNF170-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D1BA9)

HSP 1 Score: 115 bits (289), Expect = 2.930e-27
Identity = 68/187 (36.36%), Postives = 102/187 (54.55%), Query Frame = 0
Query:   75 CPICLSIEVETPVQTNCGHWFCARCILSYYDQGGRVR-IRCPMCRQEVTMLYGAAGDAQAAGDTDQAHDARAGSAPATTTGSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVL 260
            C IC +     P Q NC HWFC  CIL  ++ G  +   +CP+CR+E+T+L  +   ++      Q HD           G  E+ +   R+N     R     Q ++D P LLRRL  DL     R    +MR  V L + ++A Y+LSP+D++PE+L+GI GLLDD ++V+   LH+ ++YR+VL
Sbjct:   10 CSICQA-NFHIPCQANCSHWFCGNCILQVWNYGSALHPCKCPLCRREITLLVPSEVSSR------QRHD----------PGVAEVLQRTERYNHIFGERSNGLMQRMQDLPFLLRRLLQDLINPQ-RSLPLVMRARVFLAIILSATYVLSPVDIVPEALLGIIGLLDDFIIVLICFLHVAALYRSVL 178          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16216.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L1H9_9PHAE1.710e-18784.22E3 ubiquitin-protein ligase RNF170 n=1 Tax=Ectocar... [more]
D7FX72_ECTSI5.650e-12589.53RING-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
A0A2Z7CY40_9LAMI4.650e-3238.62E3 ubiquitin-protein ligase RNF170 n=1 Tax=Dorcoce... [more]
UPI0020095D382.230e-3139.47E3 ubiquitin-protein ligase RNF170-like n=3 Tax=Sa... [more]
A0A023GH49_AMBTT1.670e-2837.68E3 ubiquitin-protein ligase RNF170 n=3 Tax=Amblyom... [more]
UPI001FB083FF7.710e-2836.36E3 ubiquitin-protein ligase RNF170 n=1 Tax=Impatie... [more]
A0A6M2CSY6_RHIMP1.310e-2736.84E3 ubiquitin-protein ligase RNF170 (Fragment) n=2 ... [more]
A0A7J7KM54_BUGNE1.350e-2736.36E3 ubiquitin-protein ligase RNF170 n=1 Tax=Bugula ... [more]
A0A224Z849_9ACAR2.450e-2736.84E3 ubiquitin-protein ligase RNF170 n=1 Tax=Rhipice... [more]
UPI000C1D1BA92.930e-2736.36E3 ubiquitin-protein ligase RNF170-like n=1 Tax=Ol... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 75..117
e-value: 2.9E-9
score: 46.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 75..118
score: 12.548
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 49..134
e-value: 1.6E-14
score: 55.5
IPR010652Domain of unknown function DUF1232PFAMPF06803DUF1232coord: 214..247
e-value: 3.5E-8
score: 33.1
IPR027370RING-type zinc-finger, LisH dimerisation motifPFAMPF13445zf-RING_UBOXcoord: 75..115
e-value: 1.9E-8
score: 34.1
NoneNo IPR availablePANTHERPTHR22894:SF5E3 UBIQUITIN-PROTEIN LIGASE RNF170-LIKE PROTEIN (DUF 1232)coord: 51..262
NoneNo IPR availablePANTHERPTHR22894UNCHARACTERIZEDcoord: 51..262
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 261..314
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 340..358
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 335..339
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..213
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 237..241
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 242..260
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 214..236
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 359..372
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 315..334
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 74..125
NoneNo IPR availableTMHMMTMhelixcoord: 315..337
NoneNo IPR availableTMHMMTMhelixcoord: 216..238
NoneNo IPR availableTMHMMTMhelixcoord: 242..261
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 273..295
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 91..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:2127959..2130925 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16216.1mRNA_E-siliculosus-1a_M_contig8.16216.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig8 2127893..2131317 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig8.16216.1 ID=prot_E-siliculosus-1a_M_contig8.16216.1|Name=mRNA_E-siliculosus-1a_M_contig8.16216.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=373bp
MEGLPLDVILLVSIGVVAVTWLVVYVRRKLASNDQDEGGVAAAAAAAAAA
AAAGVDGANNDTTPGRLARHPGGECPICLSIEVETPVQTNCGHWFCARCI
LSYYDQGGRVRIRCPMCRQEVTMLYGAAGDAQAAGDTDQAHDARAGSAPA
TTTGSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTR
VFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLL
HLTSVYRTVLLSWERSRTARAEAAAAAAATATASGAEAAAAAAAAAPPAA
VASGEGRFDNSPQGAGMAAVLALTVGALLALAGGGEGQTAMAAGAMGAAV
AAAAERYGSRAPRAMPPLAGDW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017907Znf_RING_CS
IPR027370Znf-RING_LisH
IPR010652DUF1232
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING