prot_E-siliculosus-1a_M_contig8.16207.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16207.1
Unique Nameprot_E-siliculosus-1a_M_contig8.16207.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length115
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig8.16207.1 vs. uniprot
Match: A0A6H5K5P3_9PHAE (Importin N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5P3_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 2.130e-6
Identity = 26/29 (89.66%), Postives = 27/29 (93.10%), Query Frame = 0 
Query:   12 GFSPDQALTSPSAKRLEVFGESHEGHAAS 40
            GFSPDQALTSPSAKR E+FGESHEG AAS
Sbjct:  669 GFSPDQALTSPSAKRREIFGESHEGCAAS 697
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig8.16207.1 vs. uniprot
Match: A0A6H5KAH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAH1_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 3.160e-6
Identity = 26/31 (83.87%), Postives = 27/31 (87.10%), Query Frame = 0 
Query:   12 GFSPDQALTSPSAKRLEVFGESHEGHAASAK 42
            GFSPDQALTS SAKR EVFGESHEG AAS +
Sbjct:  107 GFSPDQALTSASAKRREVFGESHEGCAASCQ 137
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig8.16207.1 vs. uniprot
Match: A0A6H5K6Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Y7_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 1.720e-5
Identity = 25/29 (86.21%), Postives = 26/29 (89.66%), Query Frame = 0 
Query:   12 GFSPDQALTSPSAKRLEVFGESHEGHAAS 40
            GFS DQALTSPSAKR E+FGESHEG AAS
Sbjct:  211 GFSADQALTSPSAKRREIFGESHEGCAAS 239
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16207.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K5P3_9PHAE2.130e-689.66Importin N-terminal domain-containing protein n=1 ... [more]
A0A6H5KAH1_9PHAE3.160e-683.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6Y7_9PHAE1.720e-586.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:2007047..2007391 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16207.1mRNA_E-siliculosus-1a_M_contig8.16207.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig8 2007047..2007721 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig8.16207.1 ID=prot_E-siliculosus-1a_M_contig8.16207.1|Name=mRNA_E-siliculosus-1a_M_contig8.16207.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=115bp
ACRSRSTIDLVGFSPDQALTSPSAKRLEVFGESHEGHAASAKGVRYPVLT
SLRCDYDATRARCLKKRLWSCSAWPISVLPVRQIRMYLEQFGPCTSGFCV
RVTMGHMLSIIVAA*
back to top