prot_E-siliculosus-1a_M_contig8.16200.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16200.1
Unique Nameprot_E-siliculosus-1a_M_contig8.16200.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length495
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16200.1 vs. uniprot
Match: A0A6H5JC43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC43_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 4.770e-23
Identity = 71/158 (44.94%), Postives = 92/158 (58.23%), Query Frame = 0
Query:  134 PSSDPTAFVATCSNGVPGVENGMGTVCCPIECGDFCGGSGCGE------VDETSCCASTIFELHEDCDVSEEAPCFI------TGTTTATCSNGVTGVENEMGTVCCPIECGDFCGGEECV-------IDALLCCSSSITDSDVYCDESDEAPCIIGS 272
            P+  PT+   TCSNG+ G++ G G VCCP+ CG  CGG+GC        +D +SCC  +I    + CD + +APC I      + T + TCSNGV G++   G VCCP+ CG  CGG  C        + A  CC  SI  SD YCDE++EAPCIIGS
Sbjct:  260 PTPSPTS-ANTCSNGLEGID-GNGVVCCPLGCGQ-CGGTGCNTSGAAAGLDGSSCCGGSIKASGKYCDETNDAPCIIGSSPAPSPTPSETCSNGVEGIDGN-GVVCCPLGCGQ-CGGAGCTTSGAAAGLGADSCCGGSIKASDEYCDETNEAPCIIGS 412          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16200.1 vs. uniprot
Match: D8LML5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LML5_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 1.170e-22
Identity = 61/143 (42.66%), Postives = 82/143 (57.34%), Query Frame = 0
Query:  143 ATCSNGVPGVENGMGTVCCPIECGDFCGGSGCGEVDETS-----CCASTIFELHEDCDVSEEAPCFIT---GTTTATCSNGVTGVENEMGTVCCPIECGDFCGGEECV----IDALLCCSSSITDSDVYCDESDEAPCIIGSA 273
            A CSNG+ G+++     CC  ECG  CGG GC   + +S     CCA+ I E    C+VS  APC IT    +  + C NG TGV++    VCCP+ CGD CGGE C     +DA  CCS+ I +S   C ++  APC++G+A
Sbjct:   28 AVCSNGLEGIQSTSLDACCVEECG-LCGGVGCTPANTSSLTSADCCATEIIESGTLCEVSMAAPCIITTAAASNDSVCENGQTGVQDPDTDVCCPLVCGDSCGGEGCGSLAGVDATQCCSNLIIESGAVCSDTVSAPCVVGAA 169          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16200.1 vs. uniprot
Match: D7FQV4_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV4_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 3.370e-21
Identity = 67/148 (45.27%), Postives = 83/148 (56.08%), Query Frame = 0
Query:  142 VATCSNGVPGVENGMGTVCCPIECGDFCGGSGC------GEVDETSCCASTIFELHEDCDVSEEAPCFITG--TTTATCSNGVTGVENEMGTVCCPIECGDFCGGEECV-------IDALLCCSSSITDSDVYCDESDEAPCIIGSAS 274
            V TCSNG+ G+E G G VCCP+EC   CGG+GC        +   SCC   I      CD + EAPC I    TT  TCSNG+ G++   G VCCP+EC   CGG  C        + +  CC   I  S  YCD+++EAPCIIGS+S
Sbjct:  469 VETCSNGLEGIE-GNGVVCCPLECNQ-CGGTGCTMSGSAAGLGSESCCGGGIKASGAYCDDTNEAPCIIGSRPTTVETCSNGLEGIDGN-GVVCCPLECNQ-CGGTGCTTSGSAAGLGSESCCGGGIKASGAYCDDTNEAPCIIGSSS 612          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16200.1 vs. uniprot
Match: A0A6H5K7R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R2_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 7.670e-20
Identity = 62/143 (43.36%), Postives = 80/143 (55.94%), Query Frame = 0
Query:  143 ATCSNGVPGVENGMGTVCCPIECGDFCGGSGCGEVDETS-----CCASTIFELHEDCDVSEEAPCFITGTTTAT---CSNGVTGVENEMGTVCCPIECGDFCGGEECV----IDALLCCSSSITDSDVYCDESDEAPCIIGSA 273
            A CSNG+ G+++    VCC   C + CGG  C   + +S     CCA+ I E    CDVS  APC IT    A    C NG TGV +    VCCP+ECGD CGGE C     ++A  CCSS I +S   C ++  APC++G+A
Sbjct:   28 AVCSNGLEGIQSTSLDVCCVEGC-EVCGGVDCTPANTSSLTSADCCATEIVESGTFCDVSMAAPCIITTAAAANDSVCENGQTGVPDPDTDVCCPLECGDSCGGEGCGSIPGVNATQCCSSLIIESGAVCSDTVSAPCVVGAA 169          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16200.1 vs. uniprot
Match: D8LG71_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG71_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 7.580e-18
Identity = 57/137 (41.61%), Postives = 77/137 (56.20%), Query Frame = 0
Query:  144 TCSNGVPGVENGMGTVCCPIECGDFCGGSGCGEVDETS-----CCASTIFELHEDCDVSEEAPCFIT---GTTTATCSNGVTGVENEMGTVCCPIECGDFCGGEECV----IDALLCCSSSITDSDVYCDESDEAPC 268
            TC+ G+ GVE+    VCC +ECG  CGG GC   + +S     CCA+ I E    C  +  APC ++    +  + C NG TGV++    VCCP+ECG+ CGGE C     +DA  CC+S I  S + C +  EAPC
Sbjct:   24 TCAGGISGVESTSLDVCCTLECGT-CGGVGCTPANTSSLTANDCCATEISESGVMCSDTGVAPCILSTEAASADSVCDNGQTGVQDPDTDVCCPLECGESCGGEGCGTIPGVDASQCCASIIEQSGIVCGDGIEAPC 159          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16200.1 vs. uniprot
Match: D7G651_ECTSI (Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G651_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 3.190e-17
Identity = 62/158 (39.24%), Postives = 81/158 (51.27%), Query Frame = 0
Query:  144 TCSNGVPGVENGMGTVCCPIECGDFCGGSGCGEVDET------SCCASTIFELHEDCDVSEEAPCFI------------TGTTTATCSNGVTGVENEMGTVCCPIECGDFCGGEECV-------IDALLCCSSSITDSDVYCDESDEAPCIIGSASDT 276
            TCS+G  G++ G G VCCPI CG  C G GCG           SCC + +  L   CD + EAPC I            +   T TCS+G  G++   G VCCPI CG  C G+ C        + +  CC + +    +YCD+++EAPCIIGS  DT
Sbjct:  420 TCSDGTEGID-GNGVVCCPIGCGQ-CAGDGCGTAGSANGLGSESCCGNGVKSLGLYCDDTNEAPCIIGSRPDTDDVDSESADETQTCSDGTEGIDGN-GVVCCPIGCGQ-CAGDGCGTAGSANGLGSESCCGNGVKSLGLYCDDTNEAPCIIGSRPDT 573          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16200.1 vs. uniprot
Match: A0A6H5JZG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZG5_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 3.490e-17
Identity = 65/177 (36.72%), Postives = 82/177 (46.33%), Query Frame = 0
Query:  144 TCSNGVPGVENGMGTVCCPIECGDFCGGSGCGEVDETS------CCASTIFELHEDCDVSEEAPC-----------------------------------FITGTTTATCSNGVTGVENEMGTVCCPIECGDFCGGEECVIDAL-------LCCSSSITDSDVYCDESDEAPCIIGS 272
            TCSNG+ G++ G G VCC ++CG  CGG GC      +      CC+  I    E CD + EAPC                                   F  G +  TCSNG+ G++   G VCCP++CG  CGG+ C             CCS  I  SD YCDE++EAPCIIGS
Sbjct:  240 TCSNGLEGID-GSGGVCCSLDCGQ-CGGKGCYTSGSANGLGGDFCCSGGIKASDEYCDETNEAPCIIGSRPGAKMIHVPSLHVIYDRVTHKQACLANVYLFFLGQSVETCSNGLEGIDGSGG-VCCPLDCGQ-CGGKGCYTSGSANGLGGDFCCSGGIKASDEYCDETNEAPCIIGS 412          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16200.1 vs. uniprot
Match: A0A6H5JYT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYT7_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 1.820e-15
Identity = 62/164 (37.80%), Postives = 81/164 (49.39%), Query Frame = 0
Query:  142 VATCSNGVPGVENGMGTVCCPIECGDFCGGSGCGE------VDETSCCASTIFELHEDCDVSEEAPCFITGTTTA----------------------TCSNGVTGVENEMGTVCCPIECGDFCGGEECV-------IDALLCCSSSITDSDVYCDESDEAPCII 270
            V TCS+G+ G++ G G VCCP+ CG  C GSGCG       +  +SCC   I      CD +  APC       A                      TCSN + G++++ G VCCP+ CG  CGG  C        + A  CCSS + DS  YCD+++EAPCII
Sbjct:  646 VGTCSDGIEGID-GNGVVCCPLGCGQ-CAGSGCGAAGAANGLTSSSCCGGGIKSSGNYCDDTGVAPCIYGSAPNADDDXXXXXXXXXXXXXXXXXATTCSNDLEGIDHK-GEVCCPLGCGQ-CGGSGCSTSGASNGLGAESCCSSEVKDSGRYCDDANEAPCII 805          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16200.1 vs. uniprot
Match: A0A6H5JUS5_9PHAE (MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS5_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 3.940e-15
Identity = 58/153 (37.91%), Postives = 77/153 (50.33%), Query Frame = 0
Query:  147 NGVPGVENGMGTVCCPIECGDFCGGSGCGEVDET------SCCASTIFELHEDCDVSEEAPCFI----------------TGTTTATCSNGVTGVENEMGTVCCPIECGDFCGGEEC-------VIDALLCCSSSITDSDVYCDESDEAPCII 270
            +G  G++ G G VCCPI CG  CGG GC            SCC   +  L   CD + EAPC I                +   T TCSNG+ G++++ G VCCP+ CG  CGG  C        +D   CCSS +   +VYC++++ APCII
Sbjct:  575 DGTEGID-GNGVVCCPIGCGQ-CGGDGCSTAGSANGLGSESCCGGGVKSLGVYCDDTNEAPCIIGSAPDTDDVDSGISEESADDTQTCSNGIEGIDHK-GEVCCPLACGQ-CGGTGCGSAGSAFELDGESCCSSQVLAGNVYCEDTNAAPCII 723          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16200.1 vs. uniprot
Match: D7FIC5_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIC5_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 6.260e-7
Identity = 35/71 (49.30%), Postives = 42/71 (59.15%), Query Frame = 0
Query:  209 TATCSNGVTGVENEMGTVCCPIECGDFCGGEECVIDALL-------CCSSSITDSDVYCDESDEAPCIIGS 272
            T TCSNG+ G++   G VCCP+ CG  CGG+ C             CC   I  SD YCDE++EAPCIIGS
Sbjct:  445 TETCSNGLEGIDGN-GVVCCPLACGQ-CGGKGCYTSGSANGLSGDSCCGGGIKASDEYCDETNEAPCIIGS 513          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16200.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5JC43_9PHAE4.770e-2344.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LML5_ECTSI1.170e-2242.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FQV4_ECTSI3.370e-2145.27Unsaturated glucuronyl hydrolase, family GH88 n=1 ... [more]
A0A6H5K7R2_9PHAE7.670e-2043.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG71_ECTSI7.580e-1841.61Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G651_ECTSI3.190e-1739.24Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectoca... [more]
A0A6H5JZG5_9PHAE3.490e-1736.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYT7_9PHAE1.820e-1537.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUS5_9PHAE3.940e-1537.91MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FIC5_ECTSI6.260e-749.30Hypothetical leucine rich repeat protein n=1 Tax=E... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 405..409
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 380..404
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..334
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 410..427
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 360..379
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 335..359
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 428..494
NoneNo IPR availableTMHMMTMhelixcoord: 337..359
NoneNo IPR availableTMHMMTMhelixcoord: 380..399
NoneNo IPR availableTMHMMTMhelixcoord: 403..425

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:1921434..1925639 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16200.1mRNA_E-siliculosus-1a_M_contig8.16200.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig8 1921434..1926464 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig8.16200.1 ID=prot_E-siliculosus-1a_M_contig8.16200.1|Name=mRNA_E-siliculosus-1a_M_contig8.16200.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=495bp
MGTSGMHQWRSDRTAAASSTHASSKMFVASMAVLIMLSGKRLCVTKARTL
VQIAPEPLGLAETAVLVSLVGYNWPPYIVVIGNRATKHMVLKFLFATLVP
LSTAATTVVPTAAPVPATVDPAPTTAAANATVAPSSDPTAFVATCSNGVP
GVENGMGTVCCPIECGDFCGGSGCGEVDETSCCASTIFELHEDCDVSEEA
PCFITGTTTATCSNGVTGVENEMGTVCCPIECGDFCGGEECVIDALLCCS
SSITDSDVYCDESDEAPCIIGSASDTPSPVAILLPTPGTTTAPGEATAPP
SNSSSGGGTDPTTVAPTTTPAEVSSEDDDNTRQTFSIVGAAVCAALASAV
FVLTCVGLKSHCAAEGKSIRRSLEVLCGKGSFWSAMFVLVGLLIALNVVS
LGWVWGAVSVYASVVLIFVVVAWFVAFKTGTPATVSLQCACCICPYKPSS
FSVKNEERSPRREDSVSRIAPGEEAPAWEEERGAASSAWSDSSF*
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