prot_E-siliculosus-1a_M_contig8.16164.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16164.1
Unique Nameprot_E-siliculosus-1a_M_contig8.16164.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length220
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16164.1 vs. uniprot
Match: D8LQC1_ECTSI (Rab11A, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQC1_ECTSI)

HSP 1 Score: 422 bits (1085), Expect = 3.880e-149
Identity = 218/219 (99.54%), Postives = 218/219 (99.54%), Query Frame = 0
Query:    1 MAGKEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLIGNKSDLRHLRTVTHEEAMEFAKKHNLAFLETSALDASGVDSAFQRILTEIYRLMSRKTIAANNATGPDLSRGETIALSSARDDASNRSKSSCAGSCK 219
            MAGKEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLIGNKSDLRHLRTVTHEEAMEFAKKHNLAFLETSALDASGVDSAFQRILTEIYRLMSRKTIAAN ATGPDLSRGETIALSSARDDASNRSKSSCAGSCK
Sbjct:    1 MAGKEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLIGNKSDLRHLRTVTHEEAMEFAKKHNLAFLETSALDASGVDSAFQRILTEIYRLMSRKTIAANTATGPDLSRGETIALSSARDDASNRSKSSCAGSCK 219          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16164.1 vs. uniprot
Match: A0A836CE16_9STRA (Rab11A, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE16_9STRA)

HSP 1 Score: 347 bits (890), Expect = 2.170e-119
Identity = 181/218 (83.03%), Postives = 201/218 (92.20%), Query Frame = 0
Query:    1 MAGKEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLIGNKSDLRHLRTVTHEEAMEFAKKHNLAFLETSALDASGVDSAFQRILTEIYRLMSRKTIAANNATG-PDLSRGETIALSS-ARDDASNRSKSSCAG 216
            MAGK++EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTE K IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKH+TFENVERWLKELRDHAEANIVVML+GNK DLRHLRTV+ EEA EFA+K+ LAF+ETSALDASGVD+AFQRILTEIYRLM++K ++A  ++  P L +GETIALSS A D A +RSK++C+G
Sbjct:    1 MAGKDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTENKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHITFENVERWLKELRDHAEANIVVMLVGNKCDLRHLRTVSVEEATEFAEKNKLAFIETSALDASGVDTAFQRILTEIYRLMNKKQMSAGGSSPTPALGQGETIALSSGATDKAGSRSKTACSG 218          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16164.1 vs. uniprot
Match: A0A7S2V252_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V252_9STRA)

HSP 1 Score: 347 bits (889), Expect = 2.780e-119
Identity = 183/217 (84.33%), Postives = 201/217 (92.63%), Query Frame = 0
Query:    1 MAGKEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLIGNKSDLRHLRTVTHEEAMEFAKKHNLAFLETSALDASGVDSAFQRILTEIYRLMSRKTIAA--NNATGPDLSRGETIALSSARDDAS-NRSKSSC 214
            MAGK+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGK IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVML+GNKSDLRHLR V+ EEAM FA+K+NLAF+ETSALDASGVD+AFQRILTEIYRLMSR+++ A  N+A    +SRGETI+L++ + D S + SKS+C
Sbjct:    2 MAGKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRAVSTEEAMAFAEKNNLAFIETSALDASGVDTAFQRILTEIYRLMSRRSVLAGGNDAV---ISRGETISLAATQGDGSRSSSKSNC 215          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16164.1 vs. uniprot
Match: A0A6V0CK96_9STRA (Hypothetical protein n=8 Tax=Bacillariophyta TaxID=2836 RepID=A0A6V0CK96_9STRA)

HSP 1 Score: 337 bits (863), Expect = 2.530e-115
Identity = 171/212 (80.66%), Postives = 189/212 (89.15%), Query Frame = 0
Query:    5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLIGNKSDLRHLRTVTHEEAMEFAKKHNLAFLETSALDASGVDSAFQRILTEIYRLMSRKTIAAN--NATGPDLSRGETIALSSARDDASNRSKSSC 214
            ++EYDYLFK+VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQ EGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKH TFENVERWLKELRDHAEANIVVML+GNKSDLRHLR V  +EAM F+++HNLAF+ETSALDASGVD+AFQRILTEIYRLMSR+ +AA   NA GP L+ G++I+L    ++A    K  C
Sbjct:    6 DEEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRAVETDEAMSFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRRNVAAEEANAGGPSLTAGQSISLGGGNNNAGQGEKKGC 217          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16164.1 vs. uniprot
Match: B5YND5_THAPS (Rab-type small GTPase n=3 Tax=Thalassiosira TaxID=35127 RepID=B5YND5_THAPS)

HSP 1 Score: 335 bits (858), Expect = 1.320e-114
Identity = 173/211 (81.99%), Postives = 191/211 (90.52%), Query Frame = 0
Query:    5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLIGNKSDLRHLRTVTHEEAMEFAKKHNLAFLETSALDASGVDSAFQRILTEIYRLMSRKTIAANN-ATGPDLSRGETIALSSARDDASNRSKSSC 214
            ++EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKH TFENVERWLKELRDHAEANIVVML+GNKSDLRHLR V  +EAM F+++HNLAF+ETSALDASGVD+AFQRILTEIYRLMSR+ +AA + A  P LS G+TI+L     +A N+ + +C
Sbjct:    6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRRNMAAEDGANAPQLSSGQTISL-----NAENKPRRNC 211          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16164.1 vs. uniprot
Match: B7GDZ3_PHATC (Predicted protein n=5 Tax=Bacillariophyta TaxID=2836 RepID=B7GDZ3_PHATC)

HSP 1 Score: 326 bits (836), Expect = 2.840e-111
Identity = 165/200 (82.50%), Postives = 180/200 (90.00%), Query Frame = 0
Query:    5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLIGNKSDLRHLRTVTHEEAMEFAKKHNLAFLETSALDASGVDSAFQRILTEIYRLMSRKTIAANNATGPDLSRGETIALSSARD 204
            ++EYDYLFK+VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQ EGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKH TFENVERWLKELRDHAEANIVVML+GNKSDLRHLR V  +EAM F+++HNLAF+ETSALDASGVD+AFQRILTEIYRLMSR+ + A       +S G  I+LS + D
Sbjct:    6 DEEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRRNMQAEENANAPMSAGHKISLSQSGD 205          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16164.1 vs. uniprot
Match: A0A7S0C1Y2_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C1Y2_9STRA)

HSP 1 Score: 327 bits (838), Expect = 4.150e-111
Identity = 171/214 (79.91%), Postives = 185/214 (86.45%), Query Frame = 0
Query:    4 KEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLIGNKSDLRHLRTVTHEEAMEFAKKHNLAFLETSALDASGVDSAFQRILTEIYRLMSRKTIAANNATGPD-LSRGETIALSSARDDASNRSKSSCAG 216
            +++EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQ EGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKH TFENVERWLKELRDHAEANIVVML+GNKSDLRHLR V  +EAM F+++HNLAF+ETSALDASGVD+AFQRILTEIYRLMSR+ I A  A     L  G+ I L+    D S  +K  C G
Sbjct:   34 RDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHSTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRAVETDEAMSFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRRNIQAEEAANATTLGDGQKINLN----DTSTNTKPGCCG 243          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16164.1 vs. uniprot
Match: H6WB88_VAULI (Rab11 family GTPase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB88_VAULI)

HSP 1 Score: 325 bits (832), Expect = 8.590e-110
Identity = 166/216 (76.85%), Postives = 191/216 (88.43%), Query Frame = 0
Query:    1 MAGKEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLIGNKSDLRHLRTVTHEEAMEFAKKHNLAFLETSALDASGVDSAFQRILTEIYRLMSRKTIAANNATGPDLSRGETIALSSARDDASNRSKSSCAG 216
            M  K++EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFN+ESKSTIGVEFATKSIQTE K IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+KH TFEN ERWLKELRDHAE+NIVVML+GNK DLRHLRTV+ EEA EFA+K++LAF+ETSALD+SGVD+AFQ+ILTEIY+LM++K ++ N     ++ +GE IAL+S  D AS    S+C+G
Sbjct:   55 MGAKDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNMESKSTIGVEFATKSIQTENKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHSTFENAERWLKELRDHAESNIVVMLVGNKCDLRHLRTVSVEEAKEFAEKNSLAFIETSALDSSGVDTAFQQILTEIYKLMNKKQMSGNGNNSLNIGQGERIALNSGGDKASGDG-SACSG 269          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16164.1 vs. uniprot
Match: A0A024GTW1_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GTW1_9STRA)

HSP 1 Score: 320 bits (819), Expect = 1.180e-108
Identity = 166/212 (78.30%), Postives = 187/212 (88.21%), Query Frame = 0
Query:    4 KEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLIGNKSDLRHLRTVTHEEAMEFAKKHNLAFLETSALDASGVDSAFQRILTEIYRLMSRKTIAANNATGPDLSRGETIALSSAR-DDASNRSKSSC 214
            KED+YDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATKSI  EGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+KHVTFENVERWLKELR+HA+AN V+ML+GNKSDLRHLR V  EEAM FA+K+NLAF+ETSAL+A GVDSAFQRILTEIY+LMSRKTI A  +    L  G+ I ++S + ++   + KSSC
Sbjct:    5 KEDDYDYLFKIVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATKSIVAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTFENVERWLKELREHADANTVIMLVGNKSDLRHLRAVPTEEAMAFAEKNNLAFIETSALEAIGVDSAFQRILTEIYKLMSRKTIQAEESQ-ISLPSGDNIVITSDKTEEGVKKKKSSC 215          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16164.1 vs. uniprot
Match: A0A024TRU3_9STRA (Uncharacterized protein n=11 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TRU3_9STRA)

HSP 1 Score: 319 bits (817), Expect = 2.830e-108
Identity = 166/200 (83.00%), Postives = 179/200 (89.50%), Query Frame = 0
Query:    3 GKEDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLIGNKSDLRHLRTVTHEEAMEFAKKHNLAFLETSALDASGVDSAFQRILTEIYRLMSRKTIAANNATGPDLSRGETIALSS 201
            GK DE YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATKSIQ EGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+KH TFENVERWLKELRDHA+AN V+ML+GNKSDLRHLR V  EEAM FA+KHNLAFLETSALDA+GVD+AFQRILTEIY LMSRKT+ A   +   L +G  I ++S
Sbjct:    4 GKADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATKSIQAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHPTFENVERWLKELRDHADANTVIMLVGNKSDLRHLRAVQTEEAMAFAEKHNLAFLETSALDATGVDTAFQRILTEIYNLMSRKTMQAEEHSA-SLPQGNKIEINS 202          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16164.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQC1_ECTSI3.880e-14999.54Rab11A, RAB family GTPase n=2 Tax=Ectocarpus TaxID... [more]
A0A836CE16_9STRA2.170e-11983.03Rab11A, rab family GTPase n=1 Tax=Tribonema minus ... [more]
A0A7S2V252_9STRA2.780e-11984.33Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V0CK96_9STRA2.530e-11580.66Hypothetical protein n=8 Tax=Bacillariophyta TaxID... [more]
B5YND5_THAPS1.320e-11481.99Rab-type small GTPase n=3 Tax=Thalassiosira TaxID=... [more]
B7GDZ3_PHATC2.840e-11182.50Predicted protein n=5 Tax=Bacillariophyta TaxID=28... [more]
A0A7S0C1Y2_9STRA4.150e-11179.91Hypothetical protein n=2 Tax=Proboscia inermis Tax... [more]
H6WB88_VAULI8.590e-11076.85Rab11 family GTPase n=1 Tax=Vaucheria litorea TaxI... [more]
A0A024GTW1_9STRA1.180e-10878.30Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A024TRU3_9STRA2.830e-10883.00Uncharacterized protein n=11 Tax=Saprolegniaceae T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 115..128
score: 49.36
coord: 12..33
score: 55.2
coord: 150..172
score: 38.3
coord: 35..51
score: 36.48
coord: 53..75
score: 52.87
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 14..172
e-value: 2.8E-12
score: 37.3
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 9..175
e-value: 2.5E-25
score: 100.1
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 17..207
e-value: 3.1E-10
score: 50.0
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 12..175
e-value: 4.1E-110
score: 381.8
NoneNo IPR availableGENE3D3.40.50.300coord: 9..194
e-value: 6.1E-69
score: 233.2
NoneNo IPR availablePANTHERPTHR24073:SF1049coord: 3..197
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 3..197
NoneNo IPR availablePROSITEPS51419RABcoord: 7..214
score: 35.27
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 10..168
e-value: 2.7E-42
score: 142.3
IPR001806Small GTPasePFAMPF00071Rascoord: 13..173
e-value: 1.2E-61
score: 207.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 7..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:1509853..1515737 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16164.1mRNA_E-siliculosus-1a_M_contig8.16164.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig8 1509853..1515737 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig8.16164.1 ID=prot_E-siliculosus-1a_M_contig8.16164.1|Name=mRNA_E-siliculosus-1a_M_contig8.16164.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=220bp
MAGKEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFAT
KSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFE
NVERWLKELRDHAEANIVVMLIGNKSDLRHLRTVTHEEAMEFAKKHNLAF
LETSALDASGVDSAFQRILTEIYRLMSRKTIAANNATGPDLSRGETIALS
SARDDASNRSKSSCAGSCK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom