prot_E-siliculosus-1a_M_contig8.16162.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16162.1
Unique Nameprot_E-siliculosus-1a_M_contig8.16162.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length482
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig8.16162.1 vs. uniprot
Match: D8LQC3_ECTSI (CTLH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQC3_ECTSI)

HSP 1 Score: 554 bits (1428), Expect = 6.140e-193
Identity = 401/435 (92.18%), Postives = 405/435 (93.10%), Query Frame = 0 
Query:   29 MPVPVTDLLADGGGXXAAGRGGKSRAVALAATLSFRTKLRREILSGNIRAATAMLQKERPGLLEKRADVRFALKCQEFIELVKKGEVTAAVSLAQRDLSRFRDSPRARSDSPSSFSSXXXAPSPNGSPFRNGHHLDNNKAXXXXXXXXXXXXXXXXTNSCASSPASSATTAGFGQAAGAGTRXXXXXXXARSGGVNXXXXXXXXXXXXXXXXGVRRPGGGARSRAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--RSYDPVKTTEDRANPEEFNSDNQACASPDRGGAFGEGYRGPADFARRGGFPSTLFGGAPSVYDSKLLAVMGLLAYSDPAASPLGYLVSGLQNQAIADKVNDSVLAADALTRRSIPDRNSSTNQRSRTASSIGGASSNEIGNGSGGTAQAAAAAVPTSGLEFAVRHLLATRQ 461
            MPVPVTDLLADGGG  AAGR GKSRAVALAATLSFRTKLRREILSGNIRAAT MLQ+ERPGLLEKRADVRFALKCQEFIELVKKGEVTAAVSLAQRDLSRFRDSPR RSDSPSSFSSXXXAPSPNGSPFRNGHHLDNNKAXXXXXXXXXXXXX   TNSCASSPA+SATTAGFGQAA     XXXXXXX       XXXXXXXXXXXXXXX GVR PGGGARSRA   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  RSYDPVKTT+DRANPEEFNSDNQACASPDRGGAFG GYRGPADFARRGGFPSTLFGGAPSVYDSKLLAVMGLLAYSDPAASPLGYLVSGLQNQAIADKVND+VLAADALTRRS PDRNSSTNQRSRTASSIGGASSNE GNGSGGTAQAAAAAVPTSGLEFAVRHLLATRQ
Sbjct:    1 MPVPVTDLLADGGGGGAAGRVGKSRAVALAATLSFRTKLRREILSGNIRAATTMLQRERPGLLEKRADVRFALKCQEFIELVKKGEVTAAVSLAQRDLSRFRDSPRTRSDSPSSFSSXXXAPSPNGSPFRNGHHLDNNKAXXXXXXXXXXXXXP--TNSCASSPAASATTAGFGQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVRGPGGGARSRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSYDPVKTTDDRANPEEFNSDNQACASPDRGGAFGGGYRGPADFARRGGFPSTLFGGAPSVYDSKLLAVMGLLAYSDPAASPLGYLVSGLQNQAIADKVNDAVLAADALTRRSNPDRNSSTNQRSRTASSIGGASSNETGNGSGGTAQAAAAAVPTSGLEFAVRHLLATRQ 433
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig8.16162.1 vs. uniprot
Match: A0A6H5JHG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHG5_9PHAE)

HSP 1 Score: 556 bits (1434), Expect = 1.520e-185
Identity = 401/483 (83.02%), Postives = 405/483 (83.85%), Query Frame = 0 
Query:    1 MMQHDGLPVPDVINPWIQPPEPPRREPVMPVPVTDLLADGGGXXAAGRGGKSRAVALAATLSFRTKLRREILSGNIRAATAMLQKERPGLLEKRADVRFALKCQEFIELVKKGEVTAAVSLAQRDLSRFRDSPRARSDSPSSFSSXXXAPSPNGSPFRNGHHLDNNKAXXXXXXXXXXXXXXXXTNSCASSPASSATTAGFGQAAGAGTRXXXXXXXARSGGVNXXXXXXXXXXXXXXXXGVRRPGGGARSRAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--RSYDPVKTTEDRANPEEFNSDNQACASPDRGGAFGEGYRGPADFARRGGFPSTLFGGAPSVYDSKLLAVMGLLAYSDPAASPLGYLVSGLQNQAIADKVNDSVLAADALTRRSIPDRNSSTNQRSRTASSIGGASSNEIGNGSGGTAQAAAAAVPTSGLEFAVRHLLATRQASRETQGNGGQAAIHPPLFL 481
            MMQHD LPVPDVINPWIQPPEPPRREPVMPVPVTDLLADGGG  AAGRGGKSRAVALAATLSFRT+LRREILSGNIRAATAMLQKERPGLLEKRADVRFALKCQEFIELVKKGEVTAAVSLAQRDLSRFRDSPR RSDSPSSF  XXX            HHLDN +A  XXXXXX        T                         XXXXXXX       XXXXXXXXXXXXXXXX        ARSRAAAG  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  RSYDPVKT+EDRANPEEFNS NQACASPDRGGAFGEGYRGPADFARRGGFPSTLFGGAPSVYDSKLLAVMGLLAYSDPAASPLGYLVSGLQNQAIADKVND+VLAADALTRRS PDRNSSTNQRSRTASSIGGASSNE GNGSGGTAQAAAAAVPTSGLEFAVRHLLATRQASRET GNG QAAIHPPLFL
Sbjct:  615 MMQHDSLPVPDVINPWIQPPEPPRREPVMPVPVTDLLADGGGGRAAGRGGKSRAVALAATLSFRTRLRREILSGNIRAATAMLQKERPGLLEKRADVRFALKCQEFIELVKKGEVTAAVSLAQRDLSRFRDSPRTRSDSPSSFXXXXXXXXXXXXXXXXXHHLDNXEAGGXXXXXXAP------TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARSRAAAGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSYDPVKTSEDRANPEEFNSGNQACASPDRGGAFGEGYRGPADFARRGGFPSTLFGGAPSVYDSKLLAVMGLLAYSDPAASPLGYLVSGLQNQAIADKVNDAVLAADALTRRSNPDRNSSTNQRSRTASSIGGASSNETGNGSGGTAQAAAAAVPTSGLEFAVRHLLATRQASRETLGNGVQAAIHPPLFL 1091
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16162.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQC3_ECTSI6.140e-19392.18CTLH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JHG5_9PHAE1.520e-18583.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006595CTLH, C-terminal LisH motifSMARTSM00668ctlhcoord: 60..117
e-value: 3.4E-8
score: 43.2
IPR006595CTLH, C-terminal LisH motifPROSITEPS50897CTLHcoord: 60..117
score: 11.198
IPR024964CTLH/CRA C-terminal to LisH motif domainPFAMPF10607CLTHcoord: 64..131
e-value: 9.6E-10
score: 38.5
NoneNo IPR availablePANTHERPTHR12864RAN BINDING PROTEIN 9-RELATEDcoord: 60..458

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:1485952..1490532 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16162.1mRNA_E-siliculosus-1a_M_contig8.16162.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig8 1485936..1491885 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig8.16162.1 ID=prot_E-siliculosus-1a_M_contig8.16162.1|Name=mRNA_E-siliculosus-1a_M_contig8.16162.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=482bp
MMQHDGLPVPDVINPWIQPPEPPRREPVMPVPVTDLLADGGGGGAAGRGG
KSRAVALAATLSFRTKLRREILSGNIRAATAMLQKERPGLLEKRADVRFA
LKCQEFIELVKKGEVTAAVSLAQRDLSRFRDSPRARSDSPSSFSSSSSAP
SPNGSPFRNGHHLDNNKAGGGGGGGGGGGGGSAPTNSCASSPASSATTAG
FGQAAGAGTRGGTSSATARSGGVNTRGAAQRRGAPGTRGGGVRRPGGGAR
SRAAAGGSGRGNGNGGGESEEERGEAAAGAAGRRTRKRRSRSYDPVKTTE
DRANPEEFNSDNQACASPDRGGAFGEGYRGPADFARRGGFPSTLFGGAPS
VYDSKLLAVMGLLAYSDPAASPLGYLVSGLQNQAIADKVNDSVLAADALT
RRSIPDRNSSTNQRSRTASSIGGASSNEIGNGSGGTAQAAAAAVPTSGLE
FAVRHLLATRQASRETQGNGGQAAIHPPLFL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024964CTLH/CRA
IPR006595CTLH_C